RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 TEFQ10587 303 aa12.78□□□□□ -0.36
CACNA1A-216ENST00000635742 FTSJ3Q8IY81 847 aaKnown RBP12.78□□□□□ -0.36
CACNA1A-216ENST00000635742 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.37
CACNA1A-216ENST00000635742 KCNQ3O43525 872 aa12.77□□□□□ -0.37
CACNA1A-216ENST00000635742 MVPQ14764 893 aaKnown RBP12.77□□□□□ -0.37
CACNA1A-216ENST00000635742 IFNL2Q8IZJ0 200 aa12.77□□□□□ -0.37
CACNA1A-216ENST00000635742 RGS12O14924 1447 aa12.77□□□□□ -0.37
CACNA1A-216ENST00000635742 ADAMTS2O95450 1211 aa12.76□□□□□ -0.37
CACNA1A-216ENST00000635742 MS4A1P11836 297 aa12.76□□□□□ -0.37
CACNA1A-216ENST00000635742 IL2RBP14784 551 aa12.76□□□□□ -0.37
CACNA1A-216ENST00000635742 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
CACNA1A-216ENST00000635742 BTBD11A6QL63 1104 aa12.76□□□□□ -0.37
CACNA1A-216ENST00000635742 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
CACNA1A-216ENST00000635742 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 EIF4A1P60842 406 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 NWD2Q9ULI1 1742 aa12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 ABCC4O15439 1325 aa12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 KDM2BQ8NHM5 1336 aa12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 PCDH11XQ9BZA7 1347 aa12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 PCDH11YQ9BZA8 1340 aa12.75□□□□□ -0.37
CACNA1A-216ENST00000635742 NUTM2BA6NNL0 878 aaPredicted RBP12.74□□□□□ -0.37
CACNA1A-216ENST00000635742 NUTM2EB1AL46 878 aaPredicted RBP12.74□□□□□ -0.37
CACNA1A-216ENST00000635742 NUTM2AQ8IVF1 878 aaPredicted RBP12.74□□□□□ -0.37
CACNA1A-216ENST00000635742 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
CACNA1A-216ENST00000635742 C5P01031 1676 aa12.74□□□□□ -0.37
CACNA1A-216ENST00000635742 ZCRB1Q8TBF4 217 aaKnown RBP12.74□□□□□ -0.37
CACNA1A-216ENST00000635742 DCAF5Q96JK2 942 aa12.74□□□□□ -0.37
CACNA1A-216ENST00000635742 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
CACNA1A-216ENST00000635742 SOS1Q07889 1333 aaPredicted RBP12.73□□□□□ -0.37
CACNA1A-216ENST00000635742 SLIT2O94813 1529 aa12.73□□□□□ -0.37
CACNA1A-216ENST00000635742 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 GLI3P10071 1580 aa12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 G2E3Q7L622 706 aa12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 API5Q9BZZ5 524 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 JCADQ9P266 1359 aa12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 PAPPAQ13219 1627 aa12.72□□□□□ -0.37
CACNA1A-216ENST00000635742 HEG1Q9ULI3 1381 aa12.71□□□□□ -0.37
CACNA1A-216ENST00000635742 CCDC30Q5VVM6 783 aa12.71□□□□□ -0.37
CACNA1A-216ENST00000635742 PCDHB15Q9Y5E8 787 aa12.71□□□□□ -0.37
CACNA1A-216ENST00000635742 HOXB7P09629 217 aa12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 AAMPQ13685 434 aa12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 NFATC2IPQ8NCF5 419 aa12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 STK31Q9BXU1 1019 aa12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 PTPRCP08575 1304 aa12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 LRP6O75581 1613 aa12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 N4BP2Q86UW6 1770 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 IGHDP01880 384 aa12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 DDX54Q8TDD1 881 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-216ENST00000635742 UBR2Q8IWV8 1755 aa12.69□□□□□ -0.38
CACNA1A-216ENST00000635742 PRAMEF22A3QJZ6 481 aa12.69□□□□□ -0.38
CACNA1A-216ENST00000635742 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-216ENST00000635742 ZNF790Q6PG37 636 aa12.69□□□□□ -0.38
CACNA1A-216ENST00000635742 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-216ENST00000635742 EIF2S2P20042 333 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-216ENST00000635742 TNS2Q63HR2 1409 aa12.68□□□□□ -0.38
CACNA1A-216ENST00000635742 LAMB4A4D0S4 1761 aa12.68□□□□□ -0.38
CACNA1A-216ENST00000635742 CABP4P57796 275 aa12.68□□□□□ -0.38
CACNA1A-216ENST00000635742 FLIIQ13045 1269 aa12.68□□□□□ -0.38
CACNA1A-216ENST00000635742 SKAP1Q86WV1 359 aa12.68□□□□□ -0.38
CACNA1A-216ENST00000635742 ZBTB40Q9NUA8 1239 aa12.68□□□□□ -0.38
CACNA1A-216ENST00000635742 SPATA31A1Q5TZJ5 1347 aa12.68□□□□□ -0.38
CACNA1A-216ENST00000635742 CHPF2Q9P2E5 772 aa12.67□□□□□ -0.38
CACNA1A-216ENST00000635742 ITGB4P16144 1822 aa12.66□□□□□ -0.38
CACNA1A-216ENST00000635742 F6X3S4 739 aa12.66□□□□□ -0.38
CACNA1A-216ENST00000635742 ZBTB7BO15156 539 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-216ENST00000635742 INTS3Q68E01 1043 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-216ENST00000635742 ZNF496Q96IT1 587 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-216ENST00000635742 KCPQ6ZWJ8 1503 aa12.66□□□□□ -0.38
CACNA1A-216ENST00000635742 ANXA1P04083 346 aa12.66□□□□□ -0.38
CACNA1A-216ENST00000635742 PHAXQ9H814 394 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-216ENST00000635742 DOT1LQ8TEK3 1739 aa12.66□□□□□ -0.38
CACNA1A-216ENST00000635742 SPATA31A5Q5VU36 1347 aa12.65□□□□□ -0.38
CACNA1A-216ENST00000635742 SPATA31A7Q8IWB4 1347 aa12.65□□□□□ -0.38
CACNA1A-216ENST00000635742 ERVV-2B6SEH9 535 aa12.65□□□□□ -0.38
CACNA1A-216ENST00000635742 FKBP5Q13451 457 aaPredicted RBP12.65□□□□□ -0.38
CACNA1A-216ENST00000635742 C8orf37Q96NL8 207 aa12.65□□□□□ -0.38
CACNA1A-216ENST00000635742 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
CACNA1A-216ENST00000635742 PXDNLA1KZ92 1463 aa12.65□□□□□ -0.38
CACNA1A-216ENST00000635742 BCL9LQ86UU0 1499 aa12.65□□□□□ -0.38
CACNA1A-216ENST00000635742 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.65□□□□□ -0.39
CACNA1A-216ENST00000635742 HSPA1LP34931 641 aa12.64□□□□□ -0.39
CACNA1A-216ENST00000635742 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
CACNA1A-216ENST00000635742 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
CACNA1A-216ENST00000635742 SPATA31A6Q5VVP1 1343 aa12.64□□□□□ -0.39
CACNA1A-216ENST00000635742 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
CACNA1A-216ENST00000635742 SLC4A10Q6U841 1118 aa12.63□□□□□ -0.39
CACNA1A-216ENST00000635742 THRAP3Q9Y2W1 955 aaKnown RBP12.63□□□□□ -0.39
CACNA1A-216ENST00000635742 UNC5CLQ8IV45 518 aa12.62□□□□□ -0.39
CACNA1A-216ENST00000635742 FMNL2Q96PY5 1086 aa12.62□□□□□ -0.39
CACNA1A-216ENST00000635742 DBF4Q9UBU7 674 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms