RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TIMM44O43615 452 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 SCP2P22307 547 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 MAPK1P28482 360 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 PSEN1P49768 467 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 PLEKHG4Q58EX7 1191 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 SPATA31D1Q6ZQQ2 1576 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 MS4A4AQ96JQ5 239 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 NEUROD6Q96NK8 337 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 MPHOSPH6Q99547 160 aaKnown RBP6.16□□□□□ -1.42
SDCBP-213ENST00000630925 RSPH9Q9H1X1 276 aaPredicted RBP6.16□□□□□ -1.42
SDCBP-213ENST00000630925 CHST12Q9NRB3 414 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 METTL5Q9NRN9 209 aaKnown RBP6.16□□□□□ -1.42
SDCBP-213ENST00000630925 PCDHB8Q9UN66 801 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 PRKAB1Q9Y478 270 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 PCDHB13Q9Y5F0 798 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 EID1Q9Y6B2 187 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 AP1G2O75843 785 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 POTEJP0CG39 1038 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 SETDB1Q15047 1291 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 VPS72Q15906 364 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 CDAN1Q8IWY9 1227 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 ATL2Q8NHH9 583 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 RNF34Q969K3 372 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 IFT140Q96RY7 1462 aa6.16□□□□□ -1.42
SDCBP-213ENST00000630925 LDHCP07864 332 aa6.15□□□□□ -1.42
SDCBP-213ENST00000630925 GTF2E1P29083 439 aaPredicted RBP6.15□□□□□ -1.42
SDCBP-213ENST00000630925 USP5P45974 858 aa6.15□□□□□ -1.42
SDCBP-213ENST00000630925 PRIM1P49642 420 aaKnown RBP6.15□□□□□ -1.42
SDCBP-213ENST00000630925 GNL2Q13823 731 aaKnown RBP6.15□□□□□ -1.42
SDCBP-213ENST00000630925 NFE2L2Q16236 605 aa6.15□□□□□ -1.42
SDCBP-213ENST00000630925 TUSC1Q2TAM9 212 aa6.15□□□□□ -1.42
SDCBP-213ENST00000630925 NBPF20Q3BBV1 942 aa6.15□□□□□ -1.42
SDCBP-213ENST00000630925 CCDC174Q6PII3 467 aa6.15□□□□□ -1.42
SDCBP-213ENST00000630925 PPARGC1BQ86YN6 1023 aaKnown RBP6.15□□□□□ -1.42
SDCBP-213ENST00000630925 ARPC5LQ9BPX5 153 aa6.15□□□□□ -1.42
SDCBP-213ENST00000630925 KAT6BQ8WYB5 2073 aa6.15□□□□□ -1.42
SDCBP-213ENST00000630925 IGF1RP08069 1367 aa6.15□□□□□ -1.43
SDCBP-213ENST00000630925 GAPVD1Q14C86 1478 aa6.15□□□□□ -1.43
SDCBP-213ENST00000630925 NDUFV2P19404 249 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 ARID5AQ03989 594 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 ECM1Q16610 540 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 MCF2L2Q86YR7 1114 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 MSL3Q8N5Y2 521 aaKnown RBP6.14□□□□□ -1.43
SDCBP-213ENST00000630925 SAMD3Q8N6K7 520 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 RUNDC1Q96C34 613 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 MS4A3Q96HJ5 214 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 RNPC3Q96LT9 517 aaKnown RBP6.14□□□□□ -1.43
SDCBP-213ENST00000630925 CTDP1Q9Y5B0 961 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-213ENST00000630925 ATP2B4P23634 1241 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 KCTD2Q14681 263 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 SYCP2LQ5T4T6 812 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 RIC3Q7Z5B4 369 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 DRC7Q8IY82 874 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 TTC30BQ8N4P2 665 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 PRPF38AQ8NAV1 312 aaKnown RBP6.14□□□□□ -1.43
SDCBP-213ENST00000630925 MRFAP1L1Q96HT8 127 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 MUC3BQ9H195 1237 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 EGFL7Q9UHF1 273 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 DCTN4Q9UJW0 460 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 ANAPC4Q9UJX5 808 aa6.14□□□□□ -1.43
SDCBP-213ENST00000630925 QPCTQ16769 361 aa6.13□□□□□ -1.43
SDCBP-213ENST00000630925 PPM1EQ8WY54 764 aa6.13□□□□□ -1.43
SDCBP-213ENST00000630925 CDC5LQ99459 802 aaKnown RBP6.13□□□□□ -1.43
SDCBP-213ENST00000630925 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-213ENST00000630925 CEP126Q9P2H0 1117 aa6.13□□□□□ -1.43
SDCBP-213ENST00000630925 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-213ENST00000630925 KDM6BO15054 1643 aa6.13□□□□□ -1.43
SDCBP-213ENST00000630925 H3BRB1 525 aa6.13□□□□□ -1.43
SDCBP-213ENST00000630925 K7ELQ4 463 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-213ENST00000630925 FOSP01100 380 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-213ENST00000630925 P4HBP07237 508 aaKnown RBP6.13□□□□□ -1.43
SDCBP-213ENST00000630925 SOX11P35716 441 aa6.13□□□□□ -1.43
SDCBP-213ENST00000630925 TUT1Q9H6E5 874 aaKnown RBP6.13□□□□□ -1.43
SDCBP-213ENST00000630925 PUF60Q9UHX1 559 aaKnown RBP6.13□□□□□ -1.43
SDCBP-213ENST00000630925 FEZ2Q9UHY8 353 aaPredicted RBP6.13□□□□□ -1.43
SDCBP-213ENST00000630925 BICDL2A1A5D9 508 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 KIF3BO15066 747 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 FGRP09769 529 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 SERINC3Q13530 473 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 HDAC1Q13547 482 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-213ENST00000630925 ZRSR2Q15696 482 aaKnown RBP6.12□□□□□ -1.43
SDCBP-213ENST00000630925 FERMT3Q86UX7 667 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 ZSCAN29Q8IWY8 852 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-213ENST00000630925 RGL4Q8IZJ4 473 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 OTUD6BQ8N6M0 293 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 SNRNP27Q8WVK2 155 aaKnown RBP6.12□□□□□ -1.43
SDCBP-213ENST00000630925 FAM161BQ96MY7 647 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 CEP89Q96ST8 783 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 ZHX3Q9H4I2 956 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 IFT122Q9HBG6 1241 aa6.12□□□□□ -1.43
SDCBP-213ENST00000630925 HMX1Q9NP08 348 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-213ENST00000630925 GPHNQ9NQX3 736 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-213ENST00000630925 PPP1R12AO14974 1030 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-213ENST00000630925 ICMTO60725 284 aa6.11□□□□□ -1.43
SDCBP-213ENST00000630925 FAM200BP0CF97 657 aa6.11□□□□□ -1.43
SDCBP-213ENST00000630925 DIXDC1Q155Q3 683 aa6.11□□□□□ -1.43
SDCBP-213ENST00000630925 AXDND1Q5T1B0 1012 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-213ENST00000630925 USP48Q86UV5 1035 aa6.11□□□□□ -1.43
SDCBP-213ENST00000630925 C1orf216Q8TAB5 229 aa6.11□□□□□ -1.43
SDCBP-213ENST00000630925 ARNT2Q9HBZ2 717 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms