RNA–Protein interactions for RNA: ENST00000628477.2

DDX46-212, Transcript of DEAD-box helicase 46, humanhuman

TSL 5 BASIC

Gene DDX46, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-212ENST00000628477 SCN11AQ9UI33 1791 aa17.72■□□□□ 0.43
DDX46-212ENST00000628477 PCDH11XQ9BZA7 1347 aa17.71■□□□□ 0.43
DDX46-212ENST00000628477 PCDH11YQ9BZA8 1340 aa17.71■□□□□ 0.43
DDX46-212ENST00000628477 KCNQ3O43525 872 aa17.71■□□□□ 0.43
DDX46-212ENST00000628477 HSP90AB1P08238 724 aaKnown RBP17.71■□□□□ 0.43
DDX46-212ENST00000628477 MS4A1P11836 297 aa17.71■□□□□ 0.43
DDX46-212ENST00000628477 EIF4A1P60842 406 aaKnown RBP17.71■□□□□ 0.43
DDX46-212ENST00000628477 ARHGAP45Q92619 1136 aa17.71■□□□□ 0.43
DDX46-212ENST00000628477 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
DDX46-212ENST00000628477 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.43
DDX46-212ENST00000628477 SLC52A2Q9HAB3 445 aa17.7■□□□□ 0.42
DDX46-212ENST00000628477 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
DDX46-212ENST00000628477 NRAPQ86VF7 1730 aa17.69■□□□□ 0.42
DDX46-212ENST00000628477 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
DDX46-212ENST00000628477 SLIT2O94813 1529 aa17.69■□□□□ 0.42
DDX46-212ENST00000628477 SHANK3Q9BYB0 1731 aa17.68■□□□□ 0.42
DDX46-212ENST00000628477 MVPQ14764 893 aaKnown RBP17.68■□□□□ 0.42
DDX46-212ENST00000628477 NKX1-1Q15270 411 aaPredicted RBP17.68■□□□□ 0.42
DDX46-212ENST00000628477 NFATC2IPQ8NCF5 419 aa17.68■□□□□ 0.42
DDX46-212ENST00000628477 MRC1P22897 1456 aa17.68■□□□□ 0.42
DDX46-212ENST00000628477 DDX54Q8TDD1 881 aaKnown RBP17.67■□□□□ 0.42
DDX46-212ENST00000628477 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
DDX46-212ENST00000628477 HSPA1LP34931 641 aa17.66■□□□□ 0.42
DDX46-212ENST00000628477 NWD2Q9ULI1 1742 aa17.66■□□□□ 0.42
DDX46-212ENST00000628477 SPATA31A1Q5TZJ5 1347 aa17.66■□□□□ 0.42
DDX46-212ENST00000628477 SPATA31A6Q5VVP1 1343 aa17.66■□□□□ 0.42
DDX46-212ENST00000628477 HOXB7P09629 217 aa17.66■□□□□ 0.42
DDX46-212ENST00000628477 CCDC30Q5VVM6 783 aa17.66■□□□□ 0.42
DDX46-212ENST00000628477 TMEM57Q8N5G2 664 aa17.66■□□□□ 0.42
DDX46-212ENST00000628477 HEG1Q9ULI3 1381 aa17.66■□□□□ 0.42
DDX46-212ENST00000628477 CABP4P57796 275 aa17.64■□□□□ 0.41
DDX46-212ENST00000628477 SLC39A6Q13433 755 aa17.64■□□□□ 0.41
DDX46-212ENST00000628477 AAMPQ13685 434 aa17.64■□□□□ 0.41
DDX46-212ENST00000628477 ZNF790Q6PG37 636 aa17.64■□□□□ 0.41
DDX46-212ENST00000628477 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
DDX46-212ENST00000628477 THRAP3Q9Y2W1 955 aaKnown RBP17.64■□□□□ 0.41
DDX46-212ENST00000628477 SPATA31A5Q5VU36 1347 aa17.64■□□□□ 0.41
DDX46-212ENST00000628477 SPATA31A7Q8IWB4 1347 aa17.64■□□□□ 0.41
DDX46-212ENST00000628477 ERVV-2B6SEH9 535 aa17.63■□□□□ 0.41
DDX46-212ENST00000628477 NECTIN2Q92692 538 aa17.63■□□□□ 0.41
DDX46-212ENST00000628477 C8orf37Q96NL8 207 aa17.63■□□□□ 0.41
DDX46-212ENST00000628477 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
DDX46-212ENST00000628477 ABCC4O15439 1325 aa17.63■□□□□ 0.41
DDX46-212ENST00000628477 GIGYF1O75420 1035 aaPredicted RBP17.62■□□□□ 0.41
DDX46-212ENST00000628477 HDGFL1Q5TGJ6 251 aa17.62■□□□□ 0.41
DDX46-212ENST00000628477 G2E3Q7L622 706 aa17.62■□□□□ 0.41
DDX46-212ENST00000628477 UNC5CLQ8IV45 518 aa17.62■□□□□ 0.41
DDX46-212ENST00000628477 ITPRIPQ8IWB1 547 aa17.62■□□□□ 0.41
DDX46-212ENST00000628477 NGLY1Q96IV0 654 aa17.62■□□□□ 0.41
DDX46-212ENST00000628477 PTPRCP08575 1304 aa17.62■□□□□ 0.41
DDX46-212ENST00000628477 LRP6O75581 1613 aa17.62■□□□□ 0.41
DDX46-212ENST00000628477 CDCA7Q9BWT1 371 aaPredicted RBP17.62■□□□□ 0.41
DDX46-212ENST00000628477 DDX19BQ9UMR2 479 aa17.62■□□□□ 0.41
DDX46-212ENST00000628477 BCL9LQ86UU0 1499 aa17.61■□□□□ 0.41
DDX46-212ENST00000628477 WNK3Q9BYP7 1800 aa17.61■□□□□ 0.41
DDX46-212ENST00000628477 RGS12O14924 1447 aa17.61■□□□□ 0.41
DDX46-212ENST00000628477 EXOC5O00471 708 aa17.61■□□□□ 0.41
DDX46-212ENST00000628477 EIF2S2P20042 333 aaKnown RBP17.61■□□□□ 0.41
DDX46-212ENST00000628477 FNBP4Q8N3X1 1017 aaPredicted RBP17.61■□□□□ 0.41
DDX46-212ENST00000628477 CHMP4AQ9BY43 222 aa17.6■□□□□ 0.41
DDX46-212ENST00000628477 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
DDX46-212ENST00000628477 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
DDX46-212ENST00000628477 CACNA1FO60840 1977 aa17.59■□□□□ 0.41
DDX46-212ENST00000628477 PELP1Q8IZL8 1130 aaKnown RBP17.58■□□□□ 0.41
DDX46-212ENST00000628477 ZNF496Q96IT1 587 aaPredicted RBP17.58■□□□□ 0.41
DDX46-212ENST00000628477 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.41
DDX46-212ENST00000628477 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.41
DDX46-212ENST00000628477 FLIIQ13045 1269 aa17.57■□□□□ 0.4
DDX46-212ENST00000628477 VPS72Q15906 364 aa17.57■□□□□ 0.4
DDX46-212ENST00000628477 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
DDX46-212ENST00000628477 ZBTB40Q9NUA8 1239 aa17.57■□□□□ 0.4
DDX46-212ENST00000628477 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
DDX46-212ENST00000628477 TNS2Q63HR2 1409 aa17.57■□□□□ 0.4
DDX46-212ENST00000628477 TOGARAM1Q9Y4F4 1720 aa17.57■□□□□ 0.4
DDX46-212ENST00000628477 INTS3Q68E01 1043 aaKnown RBP17.57■□□□□ 0.4
DDX46-212ENST00000628477 CHPF2Q9P2E5 772 aa17.57■□□□□ 0.4
DDX46-212ENST00000628477 ZBTB7BO15156 539 aaPredicted RBP17.56■□□□□ 0.4
DDX46-212ENST00000628477 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
DDX46-212ENST00000628477 IGHDP01880 384 aa17.55■□□□□ 0.4
DDX46-212ENST00000628477 DDB1Q16531 1140 aa17.55■□□□□ 0.4
DDX46-212ENST00000628477 CENPQQ7L2Z9 268 aaPredicted RBP17.55■□□□□ 0.4
DDX46-212ENST00000628477 PHAXQ9H814 394 aaKnown RBP17.55■□□□□ 0.4
DDX46-212ENST00000628477 F6X3S4 739 aa17.54■□□□□ 0.4
DDX46-212ENST00000628477 SNRPA1P09661 255 aaKnown RBP17.54■□□□□ 0.4
DDX46-212ENST00000628477 DBF4Q9UBU7 674 aaPredicted RBP17.54■□□□□ 0.4
DDX46-212ENST00000628477 USP21Q9UK80 565 aa17.54■□□□□ 0.4
DDX46-212ENST00000628477 FKBP5Q13451 457 aaPredicted RBP17.53■□□□□ 0.4
DDX46-212ENST00000628477 MEX3CQ5U5Q3 659 aaKnown RBP17.53■□□□□ 0.4
DDX46-212ENST00000628477 TMOD3Q9NYL9 352 aa17.53■□□□□ 0.4
DDX46-212ENST00000628477 C5P01031 1676 aa17.53■□□□□ 0.4
DDX46-212ENST00000628477 ANXA1P04083 346 aa17.53■□□□□ 0.4
DDX46-212ENST00000628477 PIGBQ92521 554 aa17.53■□□□□ 0.4
DDX46-212ENST00000628477 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
DDX46-212ENST00000628477 PAPPAQ13219 1627 aa17.52■□□□□ 0.4
DDX46-212ENST00000628477 PDIA6Q15084 440 aa17.52■□□□□ 0.39
DDX46-212ENST00000628477 FAM98CQ17RN3 349 aaKnown RBP17.52■□□□□ 0.39
DDX46-212ENST00000628477 PROSER3Q2NL68 480 aa17.52■□□□□ 0.39
DDX46-212ENST00000628477 USP16Q9Y5T5 823 aa17.52■□□□□ 0.39
DDX46-212ENST00000628477 GLI3P10071 1580 aa17.52■□□□□ 0.39
DDX46-212ENST00000628477 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms