RNA–Protein interactions for RNA: ENST00000626188.1

CHRNA4-208, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 441 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-208ENST00000626188 FSTL1Q12841 308 aa21.59■■□□□ 1.05
CHRNA4-208ENST00000626188 NKX1-1Q15270 411 aaPredicted RBP21.59■■□□□ 1.05
CHRNA4-208ENST00000626188 TRAPPC3LQ5T215 181 aa21.59■■□□□ 1.05
CHRNA4-208ENST00000626188 JMYQ8N9B5 988 aa21.59■■□□□ 1.05
CHRNA4-208ENST00000626188 CCDC87Q9NVE4 849 aa21.59■■□□□ 1.05
CHRNA4-208ENST00000626188 ASAP1Q9ULH1 1129 aa21.59■■□□□ 1.05
CHRNA4-208ENST00000626188 SLC24A1O60721 1099 aa21.58■■□□□ 1.05
CHRNA4-208ENST00000626188 DPEP1P16444 411 aa21.58■■□□□ 1.05
CHRNA4-208ENST00000626188 C9orf131Q5VYM1 1079 aa21.58■■□□□ 1.05
CHRNA4-208ENST00000626188 TESK2Q96S53 571 aa21.58■■□□□ 1.05
CHRNA4-208ENST00000626188 RTCBQ9Y3I0 505 aaKnown RBP21.58■■□□□ 1.05
CHRNA4-208ENST00000626188 C10orf71Q711Q0 1435 aa21.57■■□□□ 1.04
CHRNA4-208ENST00000626188 ST20-MTHFSA0A0A6YYL1 179 aa21.57■■□□□ 1.04
CHRNA4-208ENST00000626188 KIF24Q5T7B8 1368 aa21.57■■□□□ 1.04
CHRNA4-208ENST00000626188 PLEKHG2Q9H7P9 1386 aa21.57■■□□□ 1.04
CHRNA4-208ENST00000626188 MAP2P11137 1827 aaKnown RBP21.57■■□□□ 1.04
CHRNA4-208ENST00000626188 KDM2BQ8NHM5 1336 aa21.56■■□□□ 1.04
CHRNA4-208ENST00000626188 PKD1L3Q7Z443 1732 aa21.55■■□□□ 1.04
CHRNA4-208ENST00000626188 KIAA1551Q9HCM1 1747 aa21.55■■□□□ 1.04
CHRNA4-208ENST00000626188 KIF13BQ9NQT8 1826 aa21.55■■□□□ 1.04
CHRNA4-208ENST00000626188 PARP3Q9Y6F1 533 aa21.55■■□□□ 1.04
CHRNA4-208ENST00000626188 PPM1GO15355 546 aaPredicted RBP21.53■■□□□ 1.04
CHRNA4-208ENST00000626188 PRELPP51888 382 aa21.53■■□□□ 1.04
CHRNA4-208ENST00000626188 ATG3Q9NT62 314 aa21.53■■□□□ 1.04
CHRNA4-208ENST00000626188 KCPQ6ZWJ8 1503 aa21.52■■□□□ 1.04
CHRNA4-208ENST00000626188 RFC4P35249 363 aa21.52■■□□□ 1.04
CHRNA4-208ENST00000626188 RRAGCQ9HB90 399 aa21.52■■□□□ 1.04
CHRNA4-208ENST00000626188 RNF181Q9P0P0 153 aa21.52■■□□□ 1.04
CHRNA4-208ENST00000626188 EMILIN1Q9Y6C2 1016 aa21.52■■□□□ 1.04
CHRNA4-208ENST00000626188 TONSLQ96HA7 1378 aa21.51■■□□□ 1.03
CHRNA4-208ENST00000626188 IFNL2Q8IZJ0 200 aa21.51■■□□□ 1.03
CHRNA4-208ENST00000626188 ARHGEF1Q92888 912 aaKnown RBP21.51■■□□□ 1.03
CHRNA4-208ENST00000626188 RBM42Q9BTD8 480 aaKnown RBP21.51■■□□□ 1.03
CHRNA4-208ENST00000626188 PIM2Q9P1W9 311 aa21.51■■□□□ 1.03
CHRNA4-208ENST00000626188 ADRA2BP18089 450 aa21.5■■□□□ 1.03
CHRNA4-208ENST00000626188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.5■■□□□ 1.03
CHRNA4-208ENST00000626188 C4AP0C0L4 1744 aa21.49■■□□□ 1.03
CHRNA4-208ENST00000626188 GYS1P13807 737 aa21.49■■□□□ 1.03
CHRNA4-208ENST00000626188 PHKG2P15735 406 aa21.49■■□□□ 1.03
CHRNA4-208ENST00000626188 KCNA3P22001 575 aa21.48■■□□□ 1.03
CHRNA4-208ENST00000626188 DALRD3Q5D0E6 543 aaKnown RBP21.48■■□□□ 1.03
CHRNA4-208ENST00000626188 SMC1BQ8NDV3 1235 aa21.48■■□□□ 1.03
CHRNA4-208ENST00000626188 KIF20BQ96Q89 1820 aa21.47■■□□□ 1.03
CHRNA4-208ENST00000626188 NCAPD2Q15021 1401 aa21.46■■□□□ 1.03
CHRNA4-208ENST00000626188 RC3H1Q5TC82 1133 aaKnown RBP21.46■■□□□ 1.03
CHRNA4-208ENST00000626188 DCAF5Q96JK2 942 aa21.46■■□□□ 1.03
CHRNA4-208ENST00000626188 KDRP35968 1356 aa21.46■■□□□ 1.03
CHRNA4-208ENST00000626188 RPS6KA4O75676 772 aa21.45■■□□□ 1.02
CHRNA4-208ENST00000626188 EYA1Q99502 592 aa21.45■■□□□ 1.02
CHRNA4-208ENST00000626188 ARFGEF1Q9Y6D6 1849 aa21.44■■□□□ 1.02
CHRNA4-208ENST00000626188 BRCA1P38398 1863 aaKnown RBP21.44■■□□□ 1.02
CHRNA4-208ENST00000626188 SLC4A9Q96Q91 983 aa21.44■■□□□ 1.02
CHRNA4-208ENST00000626188 CNTNAP4Q9C0A0 1308 aa21.44■■□□□ 1.02
CHRNA4-208ENST00000626188 PCNTO95613 3336 aa21.44■■□□□ 1.02
CHRNA4-208ENST00000626188 HSPA1AP0DMV8 641 aaKnown RBP21.43■■□□□ 1.02
CHRNA4-208ENST00000626188 HSPA1BP0DMV9 641 aaKnown RBP21.43■■□□□ 1.02
CHRNA4-208ENST00000626188 WASHC2AQ641Q2 1341 aa21.42■■□□□ 1.02
CHRNA4-208ENST00000626188 TNRC6CQ9HCJ0 1690 aaKnown RBP21.42■■□□□ 1.02
CHRNA4-208ENST00000626188 ERVV-2B6SEH9 535 aa21.4■■□□□ 1.02
CHRNA4-208ENST00000626188 CHRNA5P30532 468 aa21.4■■□□□ 1.02
CHRNA4-208ENST00000626188 CDCA8Q53HL2 280 aa21.39■■□□□ 1.01
CHRNA4-208ENST00000626188 HSP90AB1P08238 724 aaKnown RBP21.38■■□□□ 1.01
CHRNA4-208ENST00000626188 SRP68Q9UHB9 627 aaKnown RBP21.38■■□□□ 1.01
CHRNA4-208ENST00000626188 VEGFAP15692 232 aaPredicted RBP21.37■■□□□ 1.01
CHRNA4-208ENST00000626188 CABP4P57796 275 aa21.37■■□□□ 1.01
CHRNA4-208ENST00000626188 FKBP8Q14318 412 aa21.37■■□□□ 1.01
CHRNA4-208ENST00000626188 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
CHRNA4-208ENST00000626188 ZC3H4Q9UPT8 1303 aaKnown RBP21.36■■□□□ 1.01
CHRNA4-208ENST00000626188 COL5A3P25940 1745 aaPredicted RBP21.36■■□□□ 1.01
CHRNA4-208ENST00000626188 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
CHRNA4-208ENST00000626188 RASSF7Q02833 373 aa21.36■■□□□ 1.01
CHRNA4-208ENST00000626188 DDR1Q08345 913 aa21.36■■□□□ 1.01
CHRNA4-208ENST00000626188 CARD14Q9BXL6 1004 aa21.36■■□□□ 1.01
CHRNA4-208ENST00000626188 USP42Q9H9J4 1324 aaKnown RBP21.35■■□□□ 1.01
CHRNA4-208ENST00000626188 CRKLP46109 303 aaKnown RBP21.35■■□□□ 1.01
CHRNA4-208ENST00000626188 GLTPD2A6NH11 291 aa21.33■■□□□ 1.01
CHRNA4-208ENST00000626188 EIF4A2Q14240 407 aaKnown RBP21.33■■□□□ 1.01
CHRNA4-208ENST00000626188 ANKRD26Q9UPS8 1709 aa21.32■■□□□ 1
CHRNA4-208ENST00000626188 LMNB1P20700 586 aa21.32■■□□□ 1
CHRNA4-208ENST00000626188 PLEKHO1Q53GL0 409 aaPredicted RBP21.32■■□□□ 1
CHRNA4-208ENST00000626188 POLKQ9UBT6 870 aa21.32■■□□□ 1
CHRNA4-208ENST00000626188 SBF1O95248 1867 aa21.32■■□□□ 1
CHRNA4-208ENST00000626188 POLRMTO00411 1230 aaKnown RBP21.31■■□□□ 1
CHRNA4-208ENST00000626188 ZNF530Q6P9A1 599 aaPredicted RBP21.31■■□□□ 1
CHRNA4-208ENST00000626188 MYH14Q7Z406 1995 aaKnown RBP21.3■■□□□ 1
CHRNA4-208ENST00000626188 ZPR1O75312 459 aa21.3■■□□□ 1
CHRNA4-208ENST00000626188 TNNT2P45379 298 aaPredicted RBP21.29■■□□□ 1
CHRNA4-208ENST00000626188 MTHFSP49914 203 aa21.29■■□□□ 1
CHRNA4-208ENST00000626188 KDM6AO15550 1401 aaPredicted RBP21.28■■□□□ 1
CHRNA4-208ENST00000626188 TM4SF1P30408 202 aa21.27■■□□□ 1
CHRNA4-208ENST00000626188 C1orf141Q5JVX7 400 aa21.27■■□□□ 1
CHRNA4-208ENST00000626188 USPL1Q5W0Q7 1092 aa21.27■■□□□ 1
CHRNA4-208ENST00000626188 AMOTQ4VCS5 1084 aa21.26■□□□□ 0.99
CHRNA4-208ENST00000626188 NFATC2IPQ8NCF5 419 aa21.26■□□□□ 0.99
CHRNA4-208ENST00000626188 DPY19L2Q6NUT2 758 aa21.25■□□□□ 0.99
CHRNA4-208ENST00000626188 TTLL6Q8N841 843 aa21.25■□□□□ 0.99
CHRNA4-208ENST00000626188 INTS5Q6P9B9 1019 aaKnown RBP21.24■□□□□ 0.99
CHRNA4-208ENST00000626188 MKRN1Q9UHC7 482 aaKnown RBP21.23■□□□□ 0.99
CHRNA4-208ENST00000626188 NFIXQ14938 502 aa21.22■□□□□ 0.99
CHRNA4-208ENST00000626188 C2CD5Q86YS7 1000 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms