RNA–Protein interactions for RNA: ENST00000625379.1

UBE2A-205, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 3

Gene UBE2A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-205	ENST00000625379	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.74	■■■□□ 2.83
UBE2A-205	ENST00000625379	ATP6V1A	P38606	617 aa		32.74	■■■□□ 2.83
UBE2A-205	ENST00000625379	SULT6B1	Q6IMI4	303 aa		32.73	■■■□□ 2.83
UBE2A-205	ENST00000625379	DCAF5	Q96JK2	942 aa		32.73	■■■□□ 2.83
UBE2A-205	ENST00000625379	CHD4	Q14839	1912 aa		32.73	■■■□□ 2.83
UBE2A-205	ENST00000625379	IL13	P35225	146 aa		32.72	■■■□□ 2.83
UBE2A-205	ENST00000625379	KDR	P35968	1356 aa		32.71	■■■□□ 2.83
UBE2A-205	ENST00000625379	ERVV-2	B6SEH9	535 aa		32.71	■■■□□ 2.83
UBE2A-205	ENST00000625379	HSP90AB1	P08238	724 aa	Known RBP	32.71	■■■□□ 2.83
UBE2A-205	ENST00000625379	AMOT	Q4VCS5	1084 aa		32.71	■■■□□ 2.83
UBE2A-205	ENST00000625379	GNPAT	O15228	680 aa		32.7	■■■□□ 2.83
UBE2A-205	ENST00000625379	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.7	■■■□□ 2.83
UBE2A-205	ENST00000625379	SSFA2	P28290	1259 aa		32.69	■■■□□ 2.82
UBE2A-205	ENST00000625379	SLC4A9	Q96Q91	983 aa		32.68	■■■□□ 2.82
UBE2A-205	ENST00000625379	CC2D1B	Q5T0F9	858 aa	Known RBP	32.67	■■■□□ 2.82
UBE2A-205	ENST00000625379	RBM42	Q9BTD8	480 aa	Known RBP	32.67	■■■□□ 2.82
UBE2A-205	ENST00000625379	PER1	O15534	1290 aa	Predicted RBP	32.66	■■■□□ 2.82
UBE2A-205	ENST00000625379	MTHFS	P49914	203 aa		32.66	■■■□□ 2.82
UBE2A-205	ENST00000625379	CABP4	P57796	275 aa		32.66	■■■□□ 2.82
UBE2A-205	ENST00000625379	C1orf141	Q5JVX7	400 aa		32.66	■■■□□ 2.82
UBE2A-205	ENST00000625379	YBX3	P16989	372 aa	Known RBP eCLIP	32.65	■■■□□ 2.82
UBE2A-205	ENST00000625379	CNGB1	Q14028	1251 aa	Predicted RBP	32.62	■■■□□ 2.81
UBE2A-205	ENST00000625379	COL5A3	P25940	1745 aa	Predicted RBP	32.62	■■■□□ 2.81
UBE2A-205	ENST00000625379	ZNF831	Q5JPB2	1677 aa		32.62	■■■□□ 2.81
UBE2A-205	ENST00000625379	CD2AP	Q9Y5K6	639 aa		32.61	■■■□□ 2.81
UBE2A-205	ENST00000625379	HMOX1	P09601	288 aa		32.59	■■■□□ 2.81
UBE2A-205	ENST00000625379	NFATC2IP	Q8NCF5	419 aa		32.58	■■■□□ 2.81
UBE2A-205	ENST00000625379	PTCD1	O75127	700 aa	Known RBP	32.57	■■■□□ 2.8
UBE2A-205	ENST00000625379	SCN11A	Q9UI33	1791 aa		32.57	■■■□□ 2.8
UBE2A-205	ENST00000625379	RTCB	Q9Y3I0	505 aa	Known RBP	32.55	■■■□□ 2.8
UBE2A-205	ENST00000625379	CNTNAP4	Q9C0A0	1308 aa		32.53	■■■□□ 2.8
UBE2A-205	ENST00000625379	WWC3	Q9ULE0	1092 aa		32.53	■■■□□ 2.8
UBE2A-205	ENST00000625379	GRIN3B	O60391	1043 aa		32.52	■■■□□ 2.8
UBE2A-205	ENST00000625379	DIAPH1	O60610	1272 aa	Known RBP	32.52	■■■□□ 2.8
UBE2A-205	ENST00000625379	AKAP4	Q5JQC9	854 aa		32.52	■■■□□ 2.8
UBE2A-205	ENST00000625379	TRAPPC3L	Q5T215	181 aa		32.52	■■■□□ 2.8
UBE2A-205	ENST00000625379	TJP1	Q07157	1748 aa		32.51	■■■□□ 2.8
UBE2A-205	ENST00000625379	MMP10	P09238	476 aa		32.51	■■■□□ 2.79
UBE2A-205	ENST00000625379	RC3H1	Q5TC82	1133 aa	Known RBP	32.51	■■■□□ 2.79
UBE2A-205	ENST00000625379	MYH14	Q7Z406	1995 aa	Known RBP	32.5	■■■□□ 2.79
UBE2A-205	ENST00000625379	COL3A1	P02461	1466 aa	Predicted RBP	32.5	■■■□□ 2.79
UBE2A-205	ENST00000625379	ARHGEF1	Q92888	912 aa	Known RBP	32.5	■■■□□ 2.79
UBE2A-205	ENST00000625379	LGR6	Q9HBX8	967 aa		32.5	■■■□□ 2.79
UBE2A-205	ENST00000625379	C4A	P0C0L4	1744 aa		32.48	■■■□□ 2.79
UBE2A-205	ENST00000625379	NPC1L1	Q9UHC9	1359 aa		32.48	■■■□□ 2.79
UBE2A-205	ENST00000625379	CIC	Q96RK0	1608 aa	Predicted RBP	32.48	■■■□□ 2.79
UBE2A-205	ENST00000625379	RPS6KA4	O75676	772 aa		32.47	■■■□□ 2.79
UBE2A-205	ENST00000625379	MRC1	P22897	1456 aa		32.47	■■■□□ 2.79
UBE2A-205	ENST00000625379	ADRA2B	P18089	450 aa		32.46	■■■□□ 2.79
UBE2A-205	ENST00000625379	CRKL	P46109	303 aa	Known RBP	32.46	■■■□□ 2.79
UBE2A-205	ENST00000625379	MTHFSD	Q2M296	383 aa	Known RBP	32.46	■■■□□ 2.79
UBE2A-205	ENST00000625379	SLC52A2	Q9HAB3	445 aa		32.46	■■■□□ 2.79
UBE2A-205	ENST00000625379	VIRMA	Q69YN4	1812 aa	Known RBP	32.45	■■■□□ 2.79
UBE2A-205	ENST00000625379	RNMT	O43148	476 aa	Known RBP	32.44	■■■□□ 2.78
UBE2A-205	ENST00000625379	RFC4	P35249	363 aa		32.44	■■■□□ 2.78
UBE2A-205	ENST00000625379	GYS1	P13807	737 aa		32.43	■■■□□ 2.78
UBE2A-205	ENST00000625379	NLGN1	Q8N2Q7	840 aa		32.42	■■■□□ 2.78
UBE2A-205	ENST00000625379	ADAMTS7	Q9UKP4	1686 aa		32.42	■■■□□ 2.78
UBE2A-205	ENST00000625379	U2SURP	O15042	1029 aa	Known RBP	32.41	■■■□□ 2.78
UBE2A-205	ENST00000625379	SLC39A6	Q13433	755 aa		32.41	■■■□□ 2.78
UBE2A-205	ENST00000625379	DNAJC10	Q8IXB1	793 aa		32.39	■■■□□ 2.78
UBE2A-205	ENST00000625379	SRP68	Q9UHB9	627 aa	Known RBP	32.39	■■■□□ 2.78
UBE2A-205	ENST00000625379	PXDNL	A1KZ92	1463 aa		32.39	■■■□□ 2.78
UBE2A-205	ENST00000625379	KIAA1551	Q9HCM1	1747 aa		32.39	■■■□□ 2.78
UBE2A-205	ENST00000625379	KIF13B	Q9NQT8	1826 aa		32.39	■■■□□ 2.78
UBE2A-205	ENST00000625379	KCP	Q6ZWJ8	1503 aa		32.38	■■■□□ 2.77
UBE2A-205	ENST00000625379	C10orf71	Q711Q0	1435 aa		32.37	■■■□□ 2.77
UBE2A-205	ENST00000625379	INTS5	Q6P9B9	1019 aa	Known RBP	32.37	■■■□□ 2.77
UBE2A-205	ENST00000625379	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.36	■■■□□ 2.77
UBE2A-205	ENST00000625379	ATP10D	Q9P241	1426 aa		32.34	■■■□□ 2.77
UBE2A-205	ENST00000625379	USP42	Q9H9J4	1324 aa	Known RBP	32.33	■■■□□ 2.77
UBE2A-205	ENST00000625379	CCDC87	Q9NVE4	849 aa		32.33	■■■□□ 2.77
UBE2A-205	ENST00000625379	PARP3	Q9Y6F1	533 aa		32.33	■■■□□ 2.77
UBE2A-205	ENST00000625379	C1QTNF8	P60827	252 aa		32.32	■■■□□ 2.76
UBE2A-205	ENST00000625379	FKBP8	Q14318	412 aa		32.32	■■■□□ 2.76
UBE2A-205	ENST00000625379		A0A0G2JLW4	131 aa		32.31	■■■□□ 2.76
UBE2A-205	ENST00000625379	GIGYF1	O75420	1035 aa	Predicted RBP	32.31	■■■□□ 2.76
UBE2A-205	ENST00000625379	CYP19A1	P11511	503 aa	Predicted RBP	32.3	■■■□□ 2.76
UBE2A-205	ENST00000625379	UBR2	Q8IWV8	1755 aa		32.3	■■■□□ 2.76
UBE2A-205	ENST00000625379	TGFB2	P61812	414 aa		32.28	■■■□□ 2.76
UBE2A-205	ENST00000625379	DDR1	Q08345	913 aa		32.28	■■■□□ 2.76
UBE2A-205	ENST00000625379	ADCY9	O60503	1353 aa		32.28	■■■□□ 2.76
UBE2A-205	ENST00000625379	SOS1	Q07889	1333 aa	Predicted RBP	32.27	■■■□□ 2.76
UBE2A-205	ENST00000625379	DPEP1	P16444	411 aa		32.26	■■■□□ 2.75
UBE2A-205	ENST00000625379	GAS2L2	Q8NHY3	880 aa		32.26	■■■□□ 2.75
UBE2A-205	ENST00000625379	CFAP53	Q96M91	514 aa		32.26	■■■□□ 2.75
UBE2A-205	ENST00000625379	GNAT3	A8MTJ3	354 aa		32.25	■■■□□ 2.75
UBE2A-205	ENST00000625379	IL17RE	Q8NFR9	667 aa		32.25	■■■□□ 2.75
UBE2A-205	ENST00000625379	ZBTB1	Q9Y2K1	713 aa		32.25	■■■□□ 2.75
UBE2A-205	ENST00000625379	USPL1	Q5W0Q7	1092 aa		32.24	■■■□□ 2.75
UBE2A-205	ENST00000625379	BCS1L	Q9Y276	419 aa		32.24	■■■□□ 2.75
UBE2A-205	ENST00000625379	PRKAR2B	P31323	418 aa		32.23	■■■□□ 2.75
UBE2A-205	ENST00000625379	TEF	Q10587	303 aa		32.23	■■■□□ 2.75
UBE2A-205	ENST00000625379	ZNF526	Q8TF50	670 aa	Predicted RBP	32.23	■■■□□ 2.75
UBE2A-205	ENST00000625379	PHACTR3	Q96KR7	559 aa		32.23	■■■□□ 2.75
UBE2A-205	ENST00000625379	SIPA1L3	O60292	1781 aa	Predicted RBP	32.22	■■■□□ 2.75
UBE2A-205	ENST00000625379	COL15A1	P39059	1388 aa		32.22	■■■□□ 2.75
UBE2A-205	ENST00000625379	SENP3-EIF4A1	A0A087X0R7	540 aa		32.22	■■■□□ 2.75
UBE2A-205	ENST00000625379	ZPR1	O75312	459 aa		32.22	■■■□□ 2.75
UBE2A-205	ENST00000625379	PPP2R1A	P30153	589 aa		32.22	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms