RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 ERBB3P21860 1342 aa24.89■■□□□ 1.58
TREX1-205ENST00000625293 SOS1Q07889 1333 aaPredicted RBP24.88■■□□□ 1.57
TREX1-205ENST00000625293 SMC5Q8IY18 1101 aa24.88■■□□□ 1.57
TREX1-205ENST00000625293 ABCC6O95255 1503 aa24.88■■□□□ 1.57
TREX1-205ENST00000625293 INTS3Q68E01 1043 aaKnown RBP24.88■■□□□ 1.57
TREX1-205ENST00000625293 COL18A1P39060 1754 aa24.87■■□□□ 1.57
TREX1-205ENST00000625293 AMOTQ4VCS5 1084 aa24.87■■□□□ 1.57
TREX1-205ENST00000625293 PLEKHO1Q53GL0 409 aaPredicted RBP24.87■■□□□ 1.57
TREX1-205ENST00000625293 PRDM11Q9NQV5 511 aa24.87■■□□□ 1.57
TREX1-205ENST00000625293 BTG4Q9NY30 223 aa24.87■■□□□ 1.57
TREX1-205ENST00000625293 SLIT2O94813 1529 aa24.86■■□□□ 1.57
TREX1-205ENST00000625293 ANP32AP39687 249 aaKnown RBP24.86■■□□□ 1.57
TREX1-205ENST00000625293 AKAP4Q5JQC9 854 aa24.86■■□□□ 1.57
TREX1-205ENST00000625293 RXRBP28702 533 aa24.85■■□□□ 1.57
TREX1-205ENST00000625293 UNC5CLQ8IV45 518 aa24.85■■□□□ 1.57
TREX1-205ENST00000625293 RGPD5Q99666 1765 aa24.84■■□□□ 1.57
TREX1-205ENST00000625293 OVOS2A0A0G2JMS6 1433 aa24.83■■□□□ 1.57
TREX1-205ENST00000625293 SLC4A2P04920 1241 aa24.83■■□□□ 1.57
TREX1-205ENST00000625293 ZNF530Q6P9A1 599 aaPredicted RBP24.83■■□□□ 1.57
TREX1-205ENST00000625293 LGR6Q9HBX8 967 aa24.82■■□□□ 1.56
TREX1-205ENST00000625293 TRPC5Q9UL62 973 aaPredicted RBP24.82■■□□□ 1.56
TREX1-205ENST00000625293 CPDO75976 1380 aa24.82■■□□□ 1.56
TREX1-205ENST00000625293 FAM208AQ9UK61 1670 aaKnown RBP24.82■■□□□ 1.56
TREX1-205ENST00000625293 KDM3BQ7LBC6 1761 aa24.8■■□□□ 1.56
TREX1-205ENST00000625293 PLCH1Q4KWH8 1693 aa24.8■■□□□ 1.56
TREX1-205ENST00000625293 G2E3Q7L622 706 aa24.8■■□□□ 1.56
TREX1-205ENST00000625293 IPO9Q96P70 1041 aaKnown RBP24.8■■□□□ 1.56
TREX1-205ENST00000625293 ATRNO75882 1429 aa24.8■■□□□ 1.56
TREX1-205ENST00000625293 ADAMTS7Q9UKP4 1686 aa24.79■■□□□ 1.56
TREX1-205ENST00000625293 RBM6P78332 1123 aaKnown RBP24.79■■□□□ 1.56
TREX1-205ENST00000625293 CCDC30Q5VVM6 783 aa24.78■■□□□ 1.56
TREX1-205ENST00000625293 SIRT2Q8IXJ6 389 aa24.78■■□□□ 1.56
TREX1-205ENST00000625293 C1orf115Q9H7X2 142 aa24.78■■□□□ 1.56
TREX1-205ENST00000625293 GJD4Q96KN9 370 aaPredicted RBP24.77■■□□□ 1.56
TREX1-205ENST00000625293 STRN4Q9NRL3 753 aa24.77■■□□□ 1.56
TREX1-205ENST00000625293 CCDC9Q9Y3X0 531 aaKnown RBP24.77■■□□□ 1.56
TREX1-205ENST00000625293 PLEKHG2Q9H7P9 1386 aa24.77■■□□□ 1.56
TREX1-205ENST00000625293 RNMTO43148 476 aaKnown RBP24.77■■□□□ 1.56
TREX1-205ENST00000625293 VIRMAQ69YN4 1812 aaKnown RBP24.77■■□□□ 1.56
TREX1-205ENST00000625293 STK31Q9BXU1 1019 aa24.76■■□□□ 1.55
TREX1-205ENST00000625293 COL14A1Q05707 1796 aaKnown RBP24.76■■□□□ 1.55
TREX1-205ENST00000625293 EIF4A1P60842 406 aaKnown RBP24.75■■□□□ 1.55
TREX1-205ENST00000625293 NUCB1Q02818 461 aa24.75■■□□□ 1.55
TREX1-205ENST00000625293 C1orf141Q5JVX7 400 aa24.75■■□□□ 1.55
TREX1-205ENST00000625293 MPRIPQ6WCQ1 1025 aa24.75■■□□□ 1.55
TREX1-205ENST00000625293 HOXB7P09629 217 aa24.74■■□□□ 1.55
TREX1-205ENST00000625293 VPS72Q15906 364 aa24.74■■□□□ 1.55
TREX1-205ENST00000625293 NPM2Q86SE8 214 aaKnown RBP24.74■■□□□ 1.55
TREX1-205ENST00000625293 GCC1Q96CN9 775 aa24.74■■□□□ 1.55
TREX1-205ENST00000625293 ATP10DQ9P241 1426 aa24.74■■□□□ 1.55
TREX1-205ENST00000625293 TEFQ10587 303 aa24.72■■□□□ 1.55
TREX1-205ENST00000625293 MEGF6O75095 1541 aa24.72■■□□□ 1.55
TREX1-205ENST00000625293 FLIIQ13045 1269 aa24.72■■□□□ 1.55
TREX1-205ENST00000625293 NLRP2Q9NX02 1062 aa24.72■■□□□ 1.55
TREX1-205ENST00000625293 NWD2Q9ULI1 1742 aa24.71■■□□□ 1.55
TREX1-205ENST00000625293 EVA1CP58658 441 aa24.71■■□□□ 1.55
TREX1-205ENST00000625293 SIPA1L3O60292 1781 aaPredicted RBP24.7■■□□□ 1.55
TREX1-205ENST00000625293 NRAPQ86VF7 1730 aa24.7■■□□□ 1.55
TREX1-205ENST00000625293 CCT4P50991 539 aaKnown RBP24.7■■□□□ 1.55
TREX1-205ENST00000625293 LARP1Q6PKG0 1096 aaKnown RBP24.7■■□□□ 1.55
TREX1-205ENST00000625293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.7■■□□□ 1.55
TREX1-205ENST00000625293 GLI3P10071 1580 aa24.7■■□□□ 1.54
TREX1-205ENST00000625293 BTBD11A6QL63 1104 aa24.7■■□□□ 1.54
TREX1-205ENST00000625293 KCNQ3O43525 872 aa24.7■■□□□ 1.54
TREX1-205ENST00000625293 RAPGEF4Q8WZA2 1011 aa24.7■■□□□ 1.54
TREX1-205ENST00000625293 USP35Q9P2H5 1018 aa24.7■■□□□ 1.54
TREX1-205ENST00000625293 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.69■■□□□ 1.54
TREX1-205ENST00000625293 CACNA1FO60840 1977 aa24.69■■□□□ 1.54
TREX1-205ENST00000625293 F6X3S4 739 aa24.69■■□□□ 1.54
TREX1-205ENST00000625293 HDGFL1Q5TGJ6 251 aa24.69■■□□□ 1.54
TREX1-205ENST00000625293 CHD1LQ86WJ1 897 aa24.69■■□□□ 1.54
TREX1-205ENST00000625293 NOP58Q9Y2X3 529 aaKnown RBP24.69■■□□□ 1.54
TREX1-205ENST00000625293 HEG1Q9ULI3 1381 aa24.68■■□□□ 1.54
TREX1-205ENST00000625293 ANKRD44Q8N8A2 993 aa24.68■■□□□ 1.54
TREX1-205ENST00000625293 MEIS3Q99687 375 aa24.68■■□□□ 1.54
TREX1-205ENST00000625293 PXDNLA1KZ92 1463 aa24.68■■□□□ 1.54
TREX1-205ENST00000625293 TATP17735 454 aaPredicted RBP24.67■■□□□ 1.54
TREX1-205ENST00000625293 SOCS7O14512 581 aa24.67■■□□□ 1.54
TREX1-205ENST00000625293 RPAP2Q8IXW5 612 aaPredicted RBP24.67■■□□□ 1.54
TREX1-205ENST00000625293 NECTIN2Q92692 538 aa24.67■■□□□ 1.54
TREX1-205ENST00000625293 KDM6AO15550 1401 aaPredicted RBP24.66■■□□□ 1.54
TREX1-205ENST00000625293 FAM98CQ17RN3 349 aaKnown RBP24.66■■□□□ 1.54
TREX1-205ENST00000625293 CEP85Q6P2H3 762 aa24.66■■□□□ 1.54
TREX1-205ENST00000625293 N4BP2Q86UW6 1770 aaPredicted RBP24.66■■□□□ 1.54
TREX1-205ENST00000625293 SPATA31A5Q5VU36 1347 aa24.66■■□□□ 1.54
TREX1-205ENST00000625293 SPATA31A7Q8IWB4 1347 aa24.66■■□□□ 1.54
TREX1-205ENST00000625293 CSB-PGBD3P0DP91 1061 aa24.65■■□□□ 1.54
TREX1-205ENST00000625293 PKD1L3Q7Z443 1732 aa24.65■■□□□ 1.54
TREX1-205ENST00000625293 FKBP5Q13451 457 aaPredicted RBP24.65■■□□□ 1.54
TREX1-205ENST00000625293 CHMP4AQ9BY43 222 aa24.65■■□□□ 1.54
TREX1-205ENST00000625293 LNPKQ9C0E8 428 aa24.65■■□□□ 1.54
TREX1-205ENST00000625293 DCTPP1Q9H773 170 aa24.65■■□□□ 1.54
TREX1-205ENST00000625293 PHKG2P15735 406 aa24.64■■□□□ 1.53
TREX1-205ENST00000625293 SPG7Q9UQ90 795 aa24.64■■□□□ 1.53
TREX1-205ENST00000625293 COL5A2P05997 1499 aaPredicted RBP24.63■■□□□ 1.53
TREX1-205ENST00000625293 SEC24BO95487 1268 aa24.63■■□□□ 1.53
TREX1-205ENST00000625293 SLC4A10Q6U841 1118 aa24.63■■□□□ 1.53
TREX1-205ENST00000625293 SEPT12Q8IYM1 358 aa24.62■■□□□ 1.53
TREX1-205ENST00000625293 ANP32EQ9BTT0 268 aa24.62■■□□□ 1.53
TREX1-205ENST00000625293 SPATA31A1Q5TZJ5 1347 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms