RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 PARD3Q8TEW0 1356 aa10.9□□□□□ -0.67
PCDHB9-203ENST00000624909 NRAPQ86VF7 1730 aa10.89□□□□□ -0.67
PCDHB9-203ENST00000624909 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
PCDHB9-203ENST00000624909 LARP1Q6PKG0 1096 aaKnown RBP10.89□□□□□ -0.67
PCDHB9-203ENST00000624909 TMC2Q8TDI7 906 aa10.89□□□□□ -0.67
PCDHB9-203ENST00000624909 CFAP53Q96M91 514 aa10.89□□□□□ -0.67
PCDHB9-203ENST00000624909 METRNQ9UJH8 293 aa10.89□□□□□ -0.67
PCDHB9-203ENST00000624909 COLQQ9Y215 455 aaPredicted RBP10.89□□□□□ -0.67
PCDHB9-203ENST00000624909 EMILIN1Q9Y6C2 1016 aa10.89□□□□□ -0.67
PCDHB9-203ENST00000624909 FAM208AQ9UK61 1670 aaKnown RBP10.89□□□□□ -0.67
PCDHB9-203ENST00000624909 PPM1GO15355 546 aaPredicted RBP10.88□□□□□ -0.67
PCDHB9-203ENST00000624909 TNNT2P45379 298 aaPredicted RBP10.88□□□□□ -0.67
PCDHB9-203ENST00000624909 MTHFSP49914 203 aa10.88□□□□□ -0.67
PCDHB9-203ENST00000624909 HSP90AB2PQ58FF8 381 aa10.88□□□□□ -0.67
PCDHB9-203ENST00000624909 PPP1R15BQ5SWA1 713 aa10.87□□□□□ -0.67
PCDHB9-203ENST00000624909 NLRP2Q9NX02 1062 aa10.87□□□□□ -0.67
PCDHB9-203ENST00000624909 MAP2P11137 1827 aaKnown RBP10.86□□□□□ -0.67
PCDHB9-203ENST00000624909 FBLN1P23142 703 aa10.86□□□□□ -0.67
PCDHB9-203ENST00000624909 PPP2R1AP30153 589 aa10.86□□□□□ -0.67
PCDHB9-203ENST00000624909 NUDCQ9Y266 331 aa10.86□□□□□ -0.67
PCDHB9-203ENST00000624909 DIAPH1O60610 1272 aaKnown RBP10.85□□□□□ -0.67
PCDHB9-203ENST00000624909 IL2RBP14784 551 aa10.85□□□□□ -0.67
PCDHB9-203ENST00000624909 CAMK2BQ13554 666 aa10.85□□□□□ -0.67
PCDHB9-203ENST00000624909 FAM98CQ17RN3 349 aaKnown RBP10.85□□□□□ -0.67
PCDHB9-203ENST00000624909 SEPT12Q8IYM1 358 aa10.85□□□□□ -0.67
PCDHB9-203ENST00000624909 PRKRIP1Q9H875 184 aaPredicted RBP10.85□□□□□ -0.67
PCDHB9-203ENST00000624909 MYBBP1AQ9BQG0 1328 aaKnown RBP10.84□□□□□ -0.67
PCDHB9-203ENST00000624909 NCAPD2Q15021 1401 aa10.84□□□□□ -0.67
PCDHB9-203ENST00000624909 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
PCDHB9-203ENST00000624909 EIF4A2Q14240 407 aaKnown RBP10.84□□□□□ -0.67
PCDHB9-203ENST00000624909 RAPGEF4Q8WZA2 1011 aa10.84□□□□□ -0.67
PCDHB9-203ENST00000624909 GLI3P10071 1580 aa10.84□□□□□ -0.67
PCDHB9-203ENST00000624909 IGSF1Q8N6C5 1336 aa10.84□□□□□ -0.67
PCDHB9-203ENST00000624909 EXOC5O00471 708 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 ANP32CO43423 234 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 IL13P35225 146 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 PDE3BQ13370 1112 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 DDB1Q16531 1140 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 NBPF6Q5VWK0 638 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 LTV1Q96GA3 475 aaPredicted RBP10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 NBPF4Q96M43 638 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 USP35Q9P2H5 1018 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 PEAK1Q9H792 1746 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 EP400Q96L91 3159 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 DISP2A7MBM2 1401 aa10.83□□□□□ -0.68
PCDHB9-203ENST00000624909 KDRP35968 1356 aa10.82□□□□□ -0.68
PCDHB9-203ENST00000624909 FOXK1P85037 733 aa10.82□□□□□ -0.68
PCDHB9-203ENST00000624909 KRT27Q7Z3Y8 459 aa10.82□□□□□ -0.68
PCDHB9-203ENST00000624909 CCDC125Q86Z20 511 aa10.82□□□□□ -0.68
PCDHB9-203ENST00000624909 EYA1Q99502 592 aa10.82□□□□□ -0.68
PCDHB9-203ENST00000624909 ARIH1Q9Y4X5 557 aaPredicted RBP10.82□□□□□ -0.68
PCDHB9-203ENST00000624909 RGPD5Q99666 1765 aa10.81□□□□□ -0.68
PCDHB9-203ENST00000624909 A0A0G2JS52 829 aa10.81□□□□□ -0.68
PCDHB9-203ENST00000624909 TATP17735 454 aaPredicted RBP10.81□□□□□ -0.68
PCDHB9-203ENST00000624909 MYT1Q01538 1121 aa10.81□□□□□ -0.68
PCDHB9-203ENST00000624909 DSG2Q14126 1118 aa10.81□□□□□ -0.68
PCDHB9-203ENST00000624909 AMOTQ4VCS5 1084 aa10.81□□□□□ -0.68
PCDHB9-203ENST00000624909 THSD7AQ9UPZ6 1657 aa10.81□□□□□ -0.68
PCDHB9-203ENST00000624909 BCL9O00512 1426 aa10.81□□□□□ -0.68
PCDHB9-203ENST00000624909 RGS12O14924 1447 aa10.81□□□□□ -0.68
PCDHB9-203ENST00000624909 C2orf72A6NCS6 295 aa10.8□□□□□ -0.68
PCDHB9-203ENST00000624909 KIF3CO14782 793 aa10.8□□□□□ -0.68
PCDHB9-203ENST00000624909 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
PCDHB9-203ENST00000624909 FAM196AQ6ZSG2 479 aa10.8□□□□□ -0.68
PCDHB9-203ENST00000624909 ZCRB1Q8TBF4 217 aaKnown RBP10.8□□□□□ -0.68
PCDHB9-203ENST00000624909 SPG7Q9UQ90 795 aa10.8□□□□□ -0.68
PCDHB9-203ENST00000624909 OVOS2A0A0G2JMS6 1433 aa10.8□□□□□ -0.68
PCDHB9-203ENST00000624909 PARP4Q9UKK3 1724 aaKnown RBP10.8□□□□□ -0.68
PCDHB9-203ENST00000624909 TNS2Q63HR2 1409 aa10.79□□□□□ -0.68
PCDHB9-203ENST00000624909 FCHSD2O94868 740 aa10.79□□□□□ -0.68
PCDHB9-203ENST00000624909 COL3A1P02461 1466 aaPredicted RBP10.79□□□□□ -0.68
PCDHB9-203ENST00000624909 TULP1O00294 542 aaPredicted RBP10.78□□□□□ -0.68
PCDHB9-203ENST00000624909 CNGB1Q14028 1251 aaPredicted RBP10.78□□□□□ -0.68
PCDHB9-203ENST00000624909 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
PCDHB9-203ENST00000624909 PCDH11XQ9BZA7 1347 aa10.78□□□□□ -0.68
PCDHB9-203ENST00000624909 PCDH11YQ9BZA8 1340 aa10.78□□□□□ -0.68
PCDHB9-203ENST00000624909 NEFMP07197 916 aa10.77□□□□□ -0.69
PCDHB9-203ENST00000624909 HSP90AB1P08238 724 aaKnown RBP10.77□□□□□ -0.69
PCDHB9-203ENST00000624909 HMGB2P26583 209 aaKnown RBP10.77□□□□□ -0.69
PCDHB9-203ENST00000624909 PLEKHO1Q53GL0 409 aaPredicted RBP10.77□□□□□ -0.69
PCDHB9-203ENST00000624909 SULT6B1Q6IMI4 303 aa10.77□□□□□ -0.69
PCDHB9-203ENST00000624909 U2SURPO15042 1029 aaKnown RBP10.76□□□□□ -0.69
PCDHB9-203ENST00000624909 ILDR2Q71H61 639 aa10.76□□□□□ -0.69
PCDHB9-203ENST00000624909 PLPP6Q8IY26 295 aa10.76□□□□□ -0.69
PCDHB9-203ENST00000624909 RGPD1P0DJD0 1748 aa10.75□□□□□ -0.69
PCDHB9-203ENST00000624909 U2AF1L5P0DN76 240 aaPredicted RBP10.75□□□□□ -0.69
PCDHB9-203ENST00000624909 PRKCSHP14314 528 aaPredicted RBP10.75□□□□□ -0.69
PCDHB9-203ENST00000624909 U2AF1Q01081 240 aaKnown RBP eCLIP10.75□□□□□ -0.69
PCDHB9-203ENST00000624909 IFNL2Q8IZJ0 200 aa10.75□□□□□ -0.69
PCDHB9-203ENST00000624909 WNK3Q9BYP7 1800 aa10.74□□□□□ -0.69
PCDHB9-203ENST00000624909 MEGF6O75095 1541 aa10.74□□□□□ -0.69
PCDHB9-203ENST00000624909 WDR43Q15061 677 aaKnown RBP eCLIP10.74□□□□□ -0.69
PCDHB9-203ENST00000624909 TMEM92Q6UXU6 159 aa10.74□□□□□ -0.69
PCDHB9-203ENST00000624909 USHBP1Q8N6Y0 703 aa10.74□□□□□ -0.69
PCDHB9-203ENST00000624909 MARCH10Q8NA82 808 aaPredicted RBP10.74□□□□□ -0.69
PCDHB9-203ENST00000624909 LRRC37A3O60309 1634 aa10.73□□□□□ -0.69
PCDHB9-203ENST00000624909 SOCS7O14512 581 aa10.73□□□□□ -0.69
PCDHB9-203ENST00000624909 SF3B2Q13435 895 aaKnown RBP10.73□□□□□ -0.69
PCDHB9-203ENST00000624909 C1orf141Q5JVX7 400 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms