RNA–Protein interactions for RNA: ENST00000623316.1

ATRX-210, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 803 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-210ENST00000623316 GIPC2Q8TF65 315 aa9.3□□□□□ -0.92
ATRX-210ENST00000623316 ARHGEF11O15085 1522 aa9.3□□□□□ -0.92
ATRX-210ENST00000623316 CHD1O14646 1710 aa9.29□□□□□ -0.92
ATRX-210ENST00000623316 NKX2-3Q8TAU0 364 aa9.29□□□□□ -0.92
ATRX-210ENST00000623316 GTF3C2Q8WUA4 911 aaPredicted RBP9.29□□□□□ -0.92
ATRX-210ENST00000623316 KCTD15Q96SI1 283 aaPredicted RBP9.29□□□□□ -0.92
ATRX-210ENST00000623316 ESF1Q9H501 851 aaKnown RBP9.29□□□□□ -0.92
ATRX-210ENST00000623316 M0R2N6 131 aa9.28□□□□□ -0.92
ATRX-210ENST00000623316 C21orf2O43822 256 aa9.28□□□□□ -0.92
ATRX-210ENST00000623316 MAPK1P28482 360 aa9.28□□□□□ -0.92
ATRX-210ENST00000623316 WEE1P30291 646 aa9.28□□□□□ -0.92
ATRX-210ENST00000623316 LCE2DQ5TA82 110 aaPredicted RBP9.28□□□□□ -0.92
ATRX-210ENST00000623316 NPAS4Q8IUM7 802 aa9.28□□□□□ -0.92
ATRX-210ENST00000623316 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.28□□□□□ -0.92
ATRX-210ENST00000623316 KIAA1522Q9P206 1035 aaPredicted RBP9.28□□□□□ -0.92
ATRX-210ENST00000623316 SEPT3Q9UH03 358 aa9.28□□□□□ -0.92
ATRX-210ENST00000623316 PBRM1Q86U86 1689 aa9.28□□□□□ -0.92
ATRX-210ENST00000623316 ERICH3Q5RHP9 1530 aa9.27□□□□□ -0.93
ATRX-210ENST00000623316 ZBTB24O43167 697 aaPredicted RBP9.27□□□□□ -0.93
ATRX-210ENST00000623316 FKBP5Q13451 457 aaPredicted RBP9.27□□□□□ -0.93
ATRX-210ENST00000623316 FHAD1B1AJZ9 1412 aa9.27□□□□□ -0.93
ATRX-210ENST00000623316 KIF27Q86VH2 1401 aa9.27□□□□□ -0.93
ATRX-210ENST00000623316 PTCD1O75127 700 aaKnown RBP9.26□□□□□ -0.93
ATRX-210ENST00000623316 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
ATRX-210ENST00000623316 ZNF326Q5BKZ1 582 aaKnown RBP9.26□□□□□ -0.93
ATRX-210ENST00000623316 ZNF358Q9NW07 568 aa9.26□□□□□ -0.93
ATRX-210ENST00000623316 DNMT3AQ9Y6K1 912 aaPredicted RBP9.26□□□□□ -0.93
ATRX-210ENST00000623316 RUSC2Q8N2Y8 1516 aa9.26□□□□□ -0.93
ATRX-210ENST00000623316 ADAMTS12P58397 1594 aa9.25□□□□□ -0.93
ATRX-210ENST00000623316 POTEMA6NI47 508 aa9.25□□□□□ -0.93
ATRX-210ENST00000623316 SF3B2Q13435 895 aaKnown RBP9.25□□□□□ -0.93
ATRX-210ENST00000623316 VASH1Q7L8A9 365 aaPredicted RBP9.25□□□□□ -0.93
ATRX-210ENST00000623316 GRIN2AQ12879 1464 aa9.25□□□□□ -0.93
ATRX-210ENST00000623316 CLASP1Q7Z460 1538 aa9.25□□□□□ -0.93
ATRX-210ENST00000623316 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
ATRX-210ENST00000623316 SCTRP47872 440 aa9.24□□□□□ -0.93
ATRX-210ENST00000623316 MTMR3Q13615 1198 aa9.24□□□□□ -0.93
ATRX-210ENST00000623316 INTS6LQ5JSJ4 861 aaKnown RBP9.24□□□□□ -0.93
ATRX-210ENST00000623316 CAPN12Q6ZSI9 719 aa9.24□□□□□ -0.93
ATRX-210ENST00000623316 ZSCAN29Q8IWY8 852 aaPredicted RBP9.24□□□□□ -0.93
ATRX-210ENST00000623316 PURBQ96QR8 312 aaKnown RBP9.24□□□□□ -0.93
ATRX-210ENST00000623316 DCTN4Q9UJW0 460 aa9.24□□□□□ -0.93
ATRX-210ENST00000623316 NUP160Q12769 1436 aa9.23□□□□□ -0.93
ATRX-210ENST00000623316 PPEF1O14829 653 aaPredicted RBP9.23□□□□□ -0.93
ATRX-210ENST00000623316 VARSP26640 1264 aaKnown RBP9.23□□□□□ -0.93
ATRX-210ENST00000623316 NAA30Q147X3 362 aaPredicted RBP9.23□□□□□ -0.93
ATRX-210ENST00000623316 GAS2L2Q8NHY3 880 aa9.23□□□□□ -0.93
ATRX-210ENST00000623316 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
ATRX-210ENST00000623316 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
ATRX-210ENST00000623316 IGSF5Q9NSI5 407 aa9.23□□□□□ -0.93
ATRX-210ENST00000623316 IGFBP4P22692 258 aa9.22□□□□□ -0.93
ATRX-210ENST00000623316 CC2D2BQ6DHV5 1058 aa9.22□□□□□ -0.93
ATRX-210ENST00000623316 CYB5RLQ6IPT4 315 aa9.22□□□□□ -0.93
ATRX-210ENST00000623316 ASB16Q96NS5 453 aa9.22□□□□□ -0.93
ATRX-210ENST00000623316 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
ATRX-210ENST00000623316 LOC105371045A0A1W2PR82 267 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 TMEM229AB2RXF0 380 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 BACH1O14867 736 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 FOXO3O43524 673 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 TRIM32Q13049 653 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 ARID5BQ14865 1188 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 ECM1Q16610 540 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 SCG3Q8WXD2 468 aaKnown RBP9.21□□□□□ -0.94
ATRX-210ENST00000623316 TRIM52Q96A61 297 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 COL26A1Q96A83 441 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 CARMIL1Q5VZK9 1371 aa9.21□□□□□ -0.94
ATRX-210ENST00000623316 CEP170Q5SW79 1584 aa9.2□□□□□ -0.94
ATRX-210ENST00000623316 GDF10P55107 478 aa9.2□□□□□ -0.94
ATRX-210ENST00000623316 ARHGAP4P98171 946 aa9.2□□□□□ -0.94
ATRX-210ENST00000623316 HELQQ8TDG4 1101 aa9.2□□□□□ -0.94
ATRX-210ENST00000623316 VTI1AQ96AJ9 217 aa9.2□□□□□ -0.94
ATRX-210ENST00000623316 USP35Q9P2H5 1018 aa9.2□□□□□ -0.94
ATRX-210ENST00000623316 ARAP1Q96P48 1450 aa9.2□□□□□ -0.94
ATRX-210ENST00000623316 WNT7BP56706 349 aa9.19□□□□□ -0.94
ATRX-210ENST00000623316 TNS4Q8IZW8 715 aa9.19□□□□□ -0.94
ATRX-210ENST00000623316 CYLDQ9NQC7 956 aa9.19□□□□□ -0.94
ATRX-210ENST00000623316 SCNN1DP51172 638 aa9.18□□□□□ -0.94
ATRX-210ENST00000623316 SKOR1P84550 965 aa9.18□□□□□ -0.94
ATRX-210ENST00000623316 ATAD2Q6PL18 1390 aa9.18□□□□□ -0.94
ATRX-210ENST00000623316 FBXO33Q7Z6M2 555 aa9.18□□□□□ -0.94
ATRX-210ENST00000623316 OSBPL3Q9H4L5 887 aa9.18□□□□□ -0.94
ATRX-210ENST00000623316 SERTAD1Q9UHV2 236 aa9.18□□□□□ -0.94
ATRX-210ENST00000623316 FAM13AO94988 1023 aa9.17□□□□□ -0.94
ATRX-210ENST00000623316 STAU1O95793 577 aaKnown RBP9.17□□□□□ -0.94
ATRX-210ENST00000623316 TCF3P15923 654 aa9.17□□□□□ -0.94
ATRX-210ENST00000623316 FSHRP23945 695 aa9.17□□□□□ -0.94
ATRX-210ENST00000623316 EHBP1Q8NDI1 1231 aa9.17□□□□□ -0.94
ATRX-210ENST00000623316 BCL11AQ9H165 835 aa9.17□□□□□ -0.94
ATRX-210ENST00000623316 TMPRSS4Q9NRS4 437 aa9.17□□□□□ -0.94
ATRX-210ENST00000623316 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
ATRX-210ENST00000623316 WASLO00401 505 aaPredicted RBP9.16□□□□□ -0.94
ATRX-210ENST00000623316 INHAP05111 366 aa9.16□□□□□ -0.94
ATRX-210ENST00000623316 TAGLNQ01995 201 aaKnown RBP9.16□□□□□ -0.94
ATRX-210ENST00000623316 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
ATRX-210ENST00000623316 RGL4Q8IZJ4 473 aa9.16□□□□□ -0.94
ATRX-210ENST00000623316 TSPAN10Q9H1Z9 355 aaPredicted RBP9.16□□□□□ -0.94
ATRX-210ENST00000623316 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.16□□□□□ -0.94
ATRX-210ENST00000623316 ERCC6L2Q5T890 1561 aa9.16□□□□□ -0.94
ATRX-210ENST00000623316 EAPPQ56P03 285 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms