RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 KIF1BPQ96EK5 621 aa10.84□□□□□ -0.67
ITSN2-213ENST00000622089 ESCO1Q5FWF5 840 aa10.84□□□□□ -0.67
ITSN2-213ENST00000622089 PYM1Q9BRP8 204 aaKnown RBP10.84□□□□□ -0.67
ITSN2-213ENST00000622089 GLRX3O76003 335 aaKnown RBP10.83□□□□□ -0.67
ITSN2-213ENST00000622089 FKBP4Q02790 459 aaKnown RBP eCLIP10.83□□□□□ -0.67
ITSN2-213ENST00000622089 SSBP05455 408 aaKnown RBP eCLIP10.83□□□□□ -0.68
ITSN2-213ENST00000622089 TOP1P11387 765 aaKnown RBP10.83□□□□□ -0.68
ITSN2-213ENST00000622089 MPHOSPH10O00566 681 aaKnown RBP10.83□□□□□ -0.68
ITSN2-213ENST00000622089 GIGYF2Q6Y7W6 1299 aaKnown RBP10.83□□□□□ -0.68
ITSN2-213ENST00000622089 NAA15Q9BXJ9 866 aaKnown RBP10.83□□□□□ -0.68
ITSN2-213ENST00000622089 ERICH4A6NGS2 130 aa10.83□□□□□ -0.68
ITSN2-213ENST00000622089 NFE2L2Q16236 605 aa10.83□□□□□ -0.68
ITSN2-213ENST00000622089 AIDAQ96BJ3 306 aa10.83□□□□□ -0.68
ITSN2-213ENST00000622089 SEC63Q9UGP8 760 aaKnown RBP10.83□□□□□ -0.68
ITSN2-213ENST00000622089 MATR3P43243 847 aaKnown RBP eCLIP10.83□□□□□ -0.68
ITSN2-213ENST00000622089 SLFN5Q08AF3 891 aa10.83□□□□□ -0.68
ITSN2-213ENST00000622089 FAM177BA6PVY3 158 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 YEATS4O95619 227 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 RAB34Q9BZG1 259 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 DDX19AQ9NUU7 478 aaKnown RBP10.82□□□□□ -0.68
ITSN2-213ENST00000622089 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.82□□□□□ -0.68
ITSN2-213ENST00000622089 MX1P20591 662 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 IGHMBP2P38935 993 aaKnown RBP10.82□□□□□ -0.68
ITSN2-213ENST00000622089 TAOK3Q9H2K8 898 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 BTBD11A6QL63 1104 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 PAFAH1B1P43034 410 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 UVSSAQ2YD98 709 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 RAI14Q9P0K7 980 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 CLIP2Q9UDT6 1046 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 LUZP1Q86V48 1076 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 CAVIN2O95810 425 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 ALS2CR12Q96Q35 445 aa10.82□□□□□ -0.68
ITSN2-213ENST00000622089 IFFO1Q0D2I5 559 aa10.81□□□□□ -0.68
ITSN2-213ENST00000622089 KIF4BQ2VIQ3 1234 aa10.81□□□□□ -0.68
ITSN2-213ENST00000622089 CACNA2D4Q7Z3S7 1137 aa10.81□□□□□ -0.68
ITSN2-213ENST00000622089 POLR3GO15318 223 aaPredicted RBP10.81□□□□□ -0.68
ITSN2-213ENST00000622089 FAM69CQ0P6D2 419 aa10.81□□□□□ -0.68
ITSN2-213ENST00000622089 TMEM266Q2M3C6 531 aa10.81□□□□□ -0.68
ITSN2-213ENST00000622089 PPP4R3AQ6IN85 833 aa10.81□□□□□ -0.68
ITSN2-213ENST00000622089 NF2P35240 595 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 SSR1P43307 286 aaKnown RBP10.8□□□□□ -0.68
ITSN2-213ENST00000622089 DDX12PQ92771 950 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 FAM114A1Q8IWE2 563 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 PPM1EQ8WY54 764 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 EHMT1Q9H9B1 1298 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 SLC52A1Q9NWF4 448 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 LRP2BPQ9P2M1 347 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 NKTRP30414 1462 aaKnown RBP10.8□□□□□ -0.68
ITSN2-213ENST00000622089 STX1AQ16623 288 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 GNAT3A8MTJ3 354 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 CCDC178Q5BJE1 867 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 GRIN2BQ13224 1484 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 SUPT6HQ7KZ85 1726 aaKnown RBP10.8□□□□□ -0.68
ITSN2-213ENST00000622089 ANKRD18BA2A2Z9 1011 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 URI1O94763 535 aaPredicted RBP10.8□□□□□ -0.68
ITSN2-213ENST00000622089 ANAPC15P60006 121 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 TXNDC2Q86VQ3 553 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 CCDC150Q8NCX0 1101 aa10.8□□□□□ -0.68
ITSN2-213ENST00000622089 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 CAMK4Q16566 473 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 MYL6BP14649 208 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 EHBP1Q8NDI1 1231 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 CCDC141Q6ZP82 1450 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 TMEM57Q8N5G2 664 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 FEZ1Q99689 392 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 CABP1Q9NZU7 370 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 RAD54L2Q9Y4B4 1467 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 C8orf76Q96K31 380 aa10.79□□□□□ -0.68
ITSN2-213ENST00000622089 KANK3Q6NY19 840 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 RNF41Q9H4P4 317 aaPredicted RBP10.78□□□□□ -0.68
ITSN2-213ENST00000622089 PAXBP1Q9Y5B6 917 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 TNNT1P13805 278 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 RBM5P52756 815 aaKnown RBP eCLIP10.78□□□□□ -0.68
ITSN2-213ENST00000622089 SPECC1LQ69YQ0 1117 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 THEMISQ8N1K5 641 aaPredicted RBP10.78□□□□□ -0.68
ITSN2-213ENST00000622089 CFTRP13569 1480 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 SSRP1Q08945 709 aaKnown RBP10.78□□□□□ -0.68
ITSN2-213ENST00000622089 PROSER2Q86WR7 435 aaPredicted RBP10.78□□□□□ -0.68
ITSN2-213ENST00000622089 LIMCH1Q9UPQ0 1083 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.78□□□□□ -0.68
ITSN2-213ENST00000622089 A0A087WZG4 1122 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 PRIMPOLQ96LW4 560 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 NUP88Q99567 741 aaPredicted RBP10.78□□□□□ -0.68
ITSN2-213ENST00000622089 CCDC175P0C221 793 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 AMPD3Q01432 767 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 PRPF40BQ6NWY9 871 aaKnown RBP10.78□□□□□ -0.68
ITSN2-213ENST00000622089 TOM1L2Q6ZVM7 507 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 HOOK3Q86VS8 718 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 MPNDQ8N594 471 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 LRRC27Q9C0I9 530 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 TMOD2Q9NZR1 351 aa10.78□□□□□ -0.68
ITSN2-213ENST00000622089 TMPOP42166 694 aaKnown RBP10.77□□□□□ -0.68
ITSN2-213ENST00000622089 LARP1Q6PKG0 1096 aaKnown RBP10.77□□□□□ -0.68
ITSN2-213ENST00000622089 CCDC113Q9H0I3 377 aa10.77□□□□□ -0.68
ITSN2-213ENST00000622089 SLC12A5Q9H2X9 1139 aa10.77□□□□□ -0.68
ITSN2-213ENST00000622089 NSD3Q9BZ95 1437 aa10.77□□□□□ -0.69
ITSN2-213ENST00000622089 NUTM1Q86Y26 1132 aa10.77□□□□□ -0.69
ITSN2-213ENST00000622089 IFI16Q16666 785 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms