RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 COL24A1Q17RW2 1714 aa12.75□□□□□ -0.37
TARDBP-227ENST00000622057 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
TARDBP-227ENST00000622057 DCAF5Q96JK2 942 aa12.75□□□□□ -0.37
TARDBP-227ENST00000622057 KNSTRNQ9Y448 316 aa12.75□□□□□ -0.37
TARDBP-227ENST00000622057 C5P01031 1676 aa12.74□□□□□ -0.37
TARDBP-227ENST00000622057 MTHFSP49914 203 aa12.74□□□□□ -0.37
TARDBP-227ENST00000622057 AMOTQ4VCS5 1084 aa12.74□□□□□ -0.37
TARDBP-227ENST00000622057 ZNF530Q6P9A1 599 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-227ENST00000622057 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
TARDBP-227ENST00000622057 CHD4Q14839 1912 aa12.74□□□□□ -0.37
TARDBP-227ENST00000622057 ITGB4P16144 1822 aa12.74□□□□□ -0.37
TARDBP-227ENST00000622057 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
TARDBP-227ENST00000622057 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
TARDBP-227ENST00000622057 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
TARDBP-227ENST00000622057 SULT6B1Q6IMI4 303 aa12.73□□□□□ -0.37
TARDBP-227ENST00000622057 AEBP1Q8IUX7 1158 aa12.73□□□□□ -0.37
TARDBP-227ENST00000622057 SLC4A9Q96Q91 983 aa12.73□□□□□ -0.37
TARDBP-227ENST00000622057 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
TARDBP-227ENST00000622057 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
TARDBP-227ENST00000622057 PTCD1O75127 700 aaKnown RBP12.71□□□□□ -0.37
TARDBP-227ENST00000622057 MMP10P09238 476 aa12.71□□□□□ -0.37
TARDBP-227ENST00000622057 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
TARDBP-227ENST00000622057 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
TARDBP-227ENST00000622057 TAF1LQ8IZX4 1826 aa12.71□□□□□ -0.38
TARDBP-227ENST00000622057 IL13P35225 146 aa12.7□□□□□ -0.38
TARDBP-227ENST00000622057 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
TARDBP-227ENST00000622057 ANKRD26Q9UPS8 1709 aa12.7□□□□□ -0.38
TARDBP-227ENST00000622057 RPS6KA4O75676 772 aa12.69□□□□□ -0.38
TARDBP-227ENST00000622057 RFC4P35249 363 aa12.69□□□□□ -0.38
TARDBP-227ENST00000622057 RC3H1Q5TC82 1133 aaKnown RBP12.69□□□□□ -0.38
TARDBP-227ENST00000622057 PIAS4Q8N2W9 510 aaPredicted RBP12.69□□□□□ -0.38
TARDBP-227ENST00000622057 ZNF526Q8TF50 670 aaPredicted RBP12.69□□□□□ -0.38
TARDBP-227ENST00000622057 PLEKHG2Q9H7P9 1386 aa12.69□□□□□ -0.38
TARDBP-227ENST00000622057 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
TARDBP-227ENST00000622057 GPBP1L1Q9HC44 474 aaPredicted RBP12.68□□□□□ -0.38
TARDBP-227ENST00000622057 CNTNAP4Q9C0A0 1308 aa12.67□□□□□ -0.38
TARDBP-227ENST00000622057 A0A0G2JLW4 131 aa12.67□□□□□ -0.38
TARDBP-227ENST00000622057 HMOX1P09601 288 aa12.67□□□□□ -0.38
TARDBP-227ENST00000622057 GYS1P13807 737 aa12.67□□□□□ -0.38
TARDBP-227ENST00000622057 ADRA2BP18089 450 aa12.67□□□□□ -0.38
TARDBP-227ENST00000622057 AMER1Q5JTC6 1135 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-227ENST00000622057 PARP3Q9Y6F1 533 aa12.67□□□□□ -0.38
TARDBP-227ENST00000622057 KDM6AO15550 1401 aaPredicted RBP12.67□□□□□ -0.38
TARDBP-227ENST00000622057 ATP10DQ9P241 1426 aa12.67□□□□□ -0.38
TARDBP-227ENST00000622057 KDRP35968 1356 aa12.67□□□□□ -0.38
TARDBP-227ENST00000622057 UBR3Q6ZT12 1888 aa12.66□□□□□ -0.38
TARDBP-227ENST00000622057 TGFB2P61812 414 aa12.66□□□□□ -0.38
TARDBP-227ENST00000622057 AKAP4Q5JQC9 854 aa12.66□□□□□ -0.38
TARDBP-227ENST00000622057 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
TARDBP-227ENST00000622057 LGR6Q9HBX8 967 aa12.66□□□□□ -0.38
TARDBP-227ENST00000622057 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
TARDBP-227ENST00000622057 BCS1LQ9Y276 419 aa12.66□□□□□ -0.38
TARDBP-227ENST00000622057 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
TARDBP-227ENST00000622057 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
TARDBP-227ENST00000622057 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
TARDBP-227ENST00000622057 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
TARDBP-227ENST00000622057 DIAPH1O60610 1272 aaKnown RBP12.63□□□□□ -0.39
TARDBP-227ENST00000622057 FCHSD2O94868 740 aa12.63□□□□□ -0.39
TARDBP-227ENST00000622057 DPEP1P16444 411 aa12.63□□□□□ -0.39
TARDBP-227ENST00000622057 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
TARDBP-227ENST00000622057 ARHGAP27Q6ZUM4 889 aa12.63□□□□□ -0.39
TARDBP-227ENST00000622057 DNAJC10Q8IXB1 793 aa12.63□□□□□ -0.39
TARDBP-227ENST00000622057 SLC52A2Q9HAB3 445 aa12.63□□□□□ -0.39
TARDBP-227ENST00000622057 PER1O15534 1290 aaPredicted RBP12.62□□□□□ -0.39
TARDBP-227ENST00000622057 FKBP8Q14318 412 aa12.62□□□□□ -0.39
TARDBP-227ENST00000622057 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
TARDBP-227ENST00000622057 INTS5Q6P9B9 1019 aaKnown RBP12.61□□□□□ -0.39
TARDBP-227ENST00000622057 PXDNLA1KZ92 1463 aa12.6□□□□□ -0.39
TARDBP-227ENST00000622057 ADCY9O60503 1353 aa12.6□□□□□ -0.39
TARDBP-227ENST00000622057 ZPR1O75312 459 aa12.6□□□□□ -0.39
TARDBP-227ENST00000622057 USPL1Q5W0Q7 1092 aa12.6□□□□□ -0.39
TARDBP-227ENST00000622057 USP42Q9H9J4 1324 aaKnown RBP12.6□□□□□ -0.39
TARDBP-227ENST00000622057 CICQ96RK0 1608 aaPredicted RBP12.59□□□□□ -0.39
TARDBP-227ENST00000622057 U2SURPO15042 1029 aaKnown RBP12.59□□□□□ -0.39
TARDBP-227ENST00000622057 KCNA3P22001 575 aa12.59□□□□□ -0.39
TARDBP-227ENST00000622057 PIM2Q9P1W9 311 aa12.59□□□□□ -0.39
TARDBP-227ENST00000622057 CYP19A1P11511 503 aaPredicted RBP12.58□□□□□ -0.4
TARDBP-227ENST00000622057 DDR1Q08345 913 aa12.58□□□□□ -0.4
TARDBP-227ENST00000622057 C10orf71Q711Q0 1435 aa12.58□□□□□ -0.4
TARDBP-227ENST00000622057 KIF3CO14782 793 aa12.57□□□□□ -0.4
TARDBP-227ENST00000622057 TM4SF1P30408 202 aa12.57□□□□□ -0.4
TARDBP-227ENST00000622057 CHRNA5P30532 468 aa12.57□□□□□ -0.4
TARDBP-227ENST00000622057 DALRD3Q5D0E6 543 aaKnown RBP12.57□□□□□ -0.4
TARDBP-227ENST00000622057 POLRMTO00411 1230 aaKnown RBP12.56□□□□□ -0.4
TARDBP-227ENST00000622057 HSPA6P17066 643 aa12.56□□□□□ -0.4
TARDBP-227ENST00000622057 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
TARDBP-227ENST00000622057 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
TARDBP-227ENST00000622057 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
TARDBP-227ENST00000622057 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-227ENST00000622057 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
TARDBP-227ENST00000622057 ZNF831Q5JPB2 1677 aa12.55□□□□□ -0.4
TARDBP-227ENST00000622057 C9orf131Q5VYM1 1079 aa12.55□□□□□ -0.4
TARDBP-227ENST00000622057 NARFQ9UHQ1 456 aa12.55□□□□□ -0.4
TARDBP-227ENST00000622057 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
TARDBP-227ENST00000622057 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-227ENST00000622057 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-227ENST00000622057 GNAT3A8MTJ3 354 aa12.54□□□□□ -0.4
TARDBP-227ENST00000622057 TEFQ10587 303 aa12.54□□□□□ -0.4
TARDBP-227ENST00000622057 NFIXQ14938 502 aa12.54□□□□□ -0.4
TARDBP-227ENST00000622057 BICDL1Q6ZP65 573 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms