RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ATG3Q9NT62 314 aa21.77■■□□□ 1.08
CD40-207ENST00000620709 COL24A1Q17RW2 1714 aa21.77■■□□□ 1.08
CD40-207ENST00000620709 HSP90AB1P08238 724 aaKnown RBP21.76■■□□□ 1.07
CD40-207ENST00000620709 AMOTQ4VCS5 1084 aa21.76■■□□□ 1.07
CD40-207ENST00000620709 C1orf141Q5JVX7 400 aa21.76■■□□□ 1.07
CD40-207ENST00000620709 AMIGO3Q86WK7 504 aa21.75■■□□□ 1.07
CD40-207ENST00000620709 DCAF5Q96JK2 942 aa21.75■■□□□ 1.07
CD40-207ENST00000620709 RBM42Q9BTD8 480 aaKnown RBP21.75■■□□□ 1.07
CD40-207ENST00000620709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.75■■□□□ 1.07
CD40-207ENST00000620709 CABP4P57796 275 aa21.75■■□□□ 1.07
CD40-207ENST00000620709 ITPK1Q13572 414 aa21.75■■□□□ 1.07
CD40-207ENST00000620709 ERVV-2B6SEH9 535 aa21.74■■□□□ 1.07
CD40-207ENST00000620709 IL13P35225 146 aa21.74■■□□□ 1.07
CD40-207ENST00000620709 MTHFSP49914 203 aa21.74■■□□□ 1.07
CD40-207ENST00000620709 GNPATO15228 680 aa21.73■■□□□ 1.07
CD40-207ENST00000620709 PLEKHG2Q9H7P9 1386 aa21.72■■□□□ 1.07
CD40-207ENST00000620709 GOLGB1Q14789 3259 aaKnown RBP21.72■■□□□ 1.07
CD40-207ENST00000620709 UBR3Q6ZT12 1888 aa21.72■■□□□ 1.07
CD40-207ENST00000620709 MIER1Q8N108 512 aa21.7■■□□□ 1.07
CD40-207ENST00000620709 KDM6AO15550 1401 aaPredicted RBP21.7■■□□□ 1.06
CD40-207ENST00000620709 CHD4Q14839 1912 aa21.7■■□□□ 1.06
CD40-207ENST00000620709 HMOX1P09601 288 aa21.7■■□□□ 1.06
CD40-207ENST00000620709 SSFA2P28290 1259 aa21.7■■□□□ 1.06
CD40-207ENST00000620709 PER1O15534 1290 aaPredicted RBP21.68■■□□□ 1.06
CD40-207ENST00000620709 NFATC2IPQ8NCF5 419 aa21.67■■□□□ 1.06
CD40-207ENST00000620709 PTCD1O75127 700 aaKnown RBP21.66■■□□□ 1.06
CD40-207ENST00000620709 ZNF784Q8NCA9 323 aaPredicted RBP21.66■■□□□ 1.06
CD40-207ENST00000620709 SLC4A9Q96Q91 983 aa21.66■■□□□ 1.06
CD40-207ENST00000620709 DIAPH1O60610 1272 aaKnown RBP21.65■■□□□ 1.06
CD40-207ENST00000620709 RTCBQ9Y3I0 505 aaKnown RBP21.65■■□□□ 1.06
CD40-207ENST00000620709 KDRP35968 1356 aa21.65■■□□□ 1.06
CD40-207ENST00000620709 CD2APQ9Y5K6 639 aa21.65■■□□□ 1.06
CD40-207ENST00000620709 YBX3P16989 372 aaKnown RBP eCLIP21.64■■□□□ 1.05
CD40-207ENST00000620709 TRAPPC3LQ5T215 181 aa21.64■■□□□ 1.05
CD40-207ENST00000620709 AKAP4Q5JQC9 854 aa21.63■■□□□ 1.05
CD40-207ENST00000620709 WWC3Q9ULE0 1092 aa21.63■■□□□ 1.05
CD40-207ENST00000620709 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
CD40-207ENST00000620709 ANP32CO43423 234 aa21.61■■□□□ 1.05
CD40-207ENST00000620709 GRIN3BO60391 1043 aa21.61■■□□□ 1.05
CD40-207ENST00000620709 LGR6Q9HBX8 967 aa21.6■■□□□ 1.05
CD40-207ENST00000620709 SCN11AQ9UI33 1791 aa21.6■■□□□ 1.05
CD40-207ENST00000620709 RFC4P35249 363 aa21.6■■□□□ 1.05
CD40-207ENST00000620709 MMP10P09238 476 aa21.59■■□□□ 1.05
CD40-207ENST00000620709 RC3H1Q5TC82 1133 aaKnown RBP21.59■■□□□ 1.05
CD40-207ENST00000620709 ARHGEF1Q92888 912 aaKnown RBP21.59■■□□□ 1.05
CD40-207ENST00000620709 CNTNAP4Q9C0A0 1308 aa21.59■■□□□ 1.05
CD40-207ENST00000620709 COL5A3P25940 1745 aaPredicted RBP21.58■■□□□ 1.05
CD40-207ENST00000620709 MTHFSDQ2M296 383 aaKnown RBP21.58■■□□□ 1.04
CD40-207ENST00000620709 ZNF831Q5JPB2 1677 aa21.57■■□□□ 1.04
CD40-207ENST00000620709 RNMTO43148 476 aaKnown RBP21.57■■□□□ 1.04
CD40-207ENST00000620709 RPS6KA4O75676 772 aa21.57■■□□□ 1.04
CD40-207ENST00000620709 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
CD40-207ENST00000620709 CRKLP46109 303 aaKnown RBP21.56■■□□□ 1.04
CD40-207ENST00000620709 SLC39A6Q13433 755 aa21.55■■□□□ 1.04
CD40-207ENST00000620709 NPC1L1Q9UHC9 1359 aa21.55■■□□□ 1.04
CD40-207ENST00000620709 ADRA2BP18089 450 aa21.55■■□□□ 1.04
CD40-207ENST00000620709 NLGN1Q8N2Q7 840 aa21.55■■□□□ 1.04
CD40-207ENST00000620709 VIRMAQ69YN4 1812 aaKnown RBP21.54■■□□□ 1.04
CD40-207ENST00000620709 MYH14Q7Z406 1995 aaKnown RBP21.54■■□□□ 1.04
CD40-207ENST00000620709 GYS1P13807 737 aa21.52■■□□□ 1.04
CD40-207ENST00000620709 DNAJC10Q8IXB1 793 aa21.52■■□□□ 1.04
CD40-207ENST00000620709 TJP1Q07157 1748 aa21.52■■□□□ 1.04
CD40-207ENST00000620709 CICQ96RK0 1608 aaPredicted RBP21.52■■□□□ 1.03
CD40-207ENST00000620709 CFAP53Q96M91 514 aa21.51■■□□□ 1.03
CD40-207ENST00000620709 SRP68Q9UHB9 627 aaKnown RBP21.51■■□□□ 1.03
CD40-207ENST00000620709 PARP3Q9Y6F1 533 aa21.51■■□□□ 1.03
CD40-207ENST00000620709 COL3A1P02461 1466 aaPredicted RBP21.51■■□□□ 1.03
CD40-207ENST00000620709 CCDC87Q9NVE4 849 aa21.5■■□□□ 1.03
CD40-207ENST00000620709 C4AP0C0L4 1744 aa21.49■■□□□ 1.03
CD40-207ENST00000620709 INTS5Q6P9B9 1019 aaKnown RBP21.49■■□□□ 1.03
CD40-207ENST00000620709 GAS2L2Q8NHY3 880 aa21.48■■□□□ 1.03
CD40-207ENST00000620709 MRC1P22897 1456 aa21.47■■□□□ 1.03
CD40-207ENST00000620709 A0A0G2JLW4 131 aa21.47■■□□□ 1.03
CD40-207ENST00000620709 GNAT3A8MTJ3 354 aa21.47■■□□□ 1.03
CD40-207ENST00000620709 TEFQ10587 303 aa21.47■■□□□ 1.03
CD40-207ENST00000620709 TTC5Q8N0Z6 440 aa21.47■■□□□ 1.03
CD40-207ENST00000620709 CCER2I3L3R5 266 aa21.46■■□□□ 1.03
CD40-207ENST00000620709 GIGYF1O75420 1035 aaPredicted RBP21.46■■□□□ 1.03
CD40-207ENST00000620709 N4BP2Q86UW6 1770 aaPredicted RBP21.46■■□□□ 1.03
CD40-207ENST00000620709 ZPR1O75312 459 aa21.45■■□□□ 1.02
CD40-207ENST00000620709 FKBP8Q14318 412 aa21.45■■□□□ 1.02
CD40-207ENST00000620709 NUDCQ9Y266 331 aa21.45■■□□□ 1.02
CD40-207ENST00000620709 USP42Q9H9J4 1324 aaKnown RBP21.45■■□□□ 1.02
CD40-207ENST00000620709 CYP19A1P11511 503 aaPredicted RBP21.45■■□□□ 1.02
CD40-207ENST00000620709 PPP2R1AP30153 589 aa21.45■■□□□ 1.02
CD40-207ENST00000620709 PRKAR2BP31323 418 aa21.45■■□□□ 1.02
CD40-207ENST00000620709 BCS1LQ9Y276 419 aa21.45■■□□□ 1.02
CD40-207ENST00000620709 KCPQ6ZWJ8 1503 aa21.44■■□□□ 1.02
CD40-207ENST00000620709 TGFB2P61812 414 aa21.44■■□□□ 1.02
CD40-207ENST00000620709 ZNF526Q8TF50 670 aaPredicted RBP21.44■■□□□ 1.02
CD40-207ENST00000620709 PRKRIP1Q9H875 184 aaPredicted RBP21.44■■□□□ 1.02
CD40-207ENST00000620709 PXDNLA1KZ92 1463 aa21.44■■□□□ 1.02
CD40-207ENST00000620709 U2AF1L5P0DN76 240 aaPredicted RBP21.43■■□□□ 1.02
CD40-207ENST00000620709 DPEP1P16444 411 aa21.43■■□□□ 1.02
CD40-207ENST00000620709 C1QTNF8P60827 252 aa21.43■■□□□ 1.02
CD40-207ENST00000620709 U2AF1Q01081 240 aaKnown RBP eCLIP21.43■■□□□ 1.02
CD40-207ENST00000620709 USPL1Q5W0Q7 1092 aa21.43■■□□□ 1.02
CD40-207ENST00000620709 IL17REQ8NFR9 667 aa21.43■■□□□ 1.02
CD40-207ENST00000620709 C10orf71Q711Q0 1435 aa21.42■■□□□ 1.02
CD40-207ENST00000620709 ADAMTS7Q9UKP4 1686 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms