RNA–Protein interactions for RNA: ENST00000619981.4

PDE4DIP-248, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 685 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-248ENST00000619981 USP21Q9UK80 565 aa13.21□□□□□ -0.29
PDE4DIP-248ENST00000619981 KCNQ3O43525 872 aa13.2□□□□□ -0.3
PDE4DIP-248ENST00000619981 ATRNO75882 1429 aa13.2□□□□□ -0.3
PDE4DIP-248ENST00000619981 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
PDE4DIP-248ENST00000619981 UBR2Q8IWV8 1755 aa13.19□□□□□ -0.3
PDE4DIP-248ENST00000619981 TCERG1O14776 1098 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-248ENST00000619981 VAMP4O75379 141 aa13.18□□□□□ -0.3
PDE4DIP-248ENST00000619981 HSP90AB1P08238 724 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-248ENST00000619981 SSH1Q8WYL5 1049 aa13.18□□□□□ -0.3
PDE4DIP-248ENST00000619981 DCAF5Q96JK2 942 aa13.18□□□□□ -0.3
PDE4DIP-248ENST00000619981 SLC52A2Q9HAB3 445 aa13.18□□□□□ -0.3
PDE4DIP-248ENST00000619981 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-248ENST00000619981 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
PDE4DIP-248ENST00000619981 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
PDE4DIP-248ENST00000619981 CT47B1P0C2W7 299 aaPredicted RBP13.17□□□□□ -0.3
PDE4DIP-248ENST00000619981 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-248ENST00000619981 C20orf194Q5TEA3 1177 aa13.17□□□□□ -0.3
PDE4DIP-248ENST00000619981 BARGINQ6ZT62 677 aa13.17□□□□□ -0.3
PDE4DIP-248ENST00000619981 SMC4Q9NTJ3 1288 aa13.17□□□□□ -0.3
PDE4DIP-248ENST00000619981 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
PDE4DIP-248ENST00000619981 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
PDE4DIP-248ENST00000619981 CDCA7Q9BWT1 371 aaPredicted RBP13.16□□□□□ -0.3
PDE4DIP-248ENST00000619981 BABAM1Q9NWV8 329 aa13.16□□□□□ -0.3
PDE4DIP-248ENST00000619981 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
PDE4DIP-248ENST00000619981 EXOC5O00471 708 aa13.15□□□□□ -0.3
PDE4DIP-248ENST00000619981 CABP4P57796 275 aa13.15□□□□□ -0.3
PDE4DIP-248ENST00000619981 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
PDE4DIP-248ENST00000619981 SLC39A6Q13433 755 aa13.15□□□□□ -0.3
PDE4DIP-248ENST00000619981 DDB1Q16531 1140 aa13.15□□□□□ -0.3
PDE4DIP-248ENST00000619981 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
PDE4DIP-248ENST00000619981 FRAT1Q92837 279 aaPredicted RBP13.15□□□□□ -0.3
PDE4DIP-248ENST00000619981 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
PDE4DIP-248ENST00000619981 BRWD3Q6RI45 1802 aa13.14□□□□□ -0.31
PDE4DIP-248ENST00000619981 FBXO41Q8TF61 875 aa13.14□□□□□ -0.31
PDE4DIP-248ENST00000619981 CACNA1FO60840 1977 aa13.13□□□□□ -0.31
PDE4DIP-248ENST00000619981 A0A0G2JS52 829 aa13.13□□□□□ -0.31
PDE4DIP-248ENST00000619981 CANXP27824 592 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-248ENST00000619981 MYT1Q01538 1121 aa13.13□□□□□ -0.31
PDE4DIP-248ENST00000619981 ALDH1L2Q3SY69 923 aa13.13□□□□□ -0.31
PDE4DIP-248ENST00000619981 MRPL50Q8N5N7 158 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-248ENST00000619981 MARCH10Q8NA82 808 aaPredicted RBP13.13□□□□□ -0.31
PDE4DIP-248ENST00000619981 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
PDE4DIP-248ENST00000619981 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
PDE4DIP-248ENST00000619981 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
PDE4DIP-248ENST00000619981 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.12□□□□□ -0.31
PDE4DIP-248ENST00000619981 GJD4Q96KN9 370 aaPredicted RBP13.12□□□□□ -0.31
PDE4DIP-248ENST00000619981 TRPC5Q9UL62 973 aaPredicted RBP13.12□□□□□ -0.31
PDE4DIP-248ENST00000619981 HEG1Q9ULI3 1381 aa13.11□□□□□ -0.31
PDE4DIP-248ENST00000619981 PRAMEF22A3QJZ6 481 aa13.11□□□□□ -0.31
PDE4DIP-248ENST00000619981 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
PDE4DIP-248ENST00000619981 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
PDE4DIP-248ENST00000619981 PANK1Q8TE04 598 aa13.11□□□□□ -0.31
PDE4DIP-248ENST00000619981 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
PDE4DIP-248ENST00000619981 NOB1Q9ULX3 412 aaKnown RBP13.11□□□□□ -0.31
PDE4DIP-248ENST00000619981 RLBP1P12271 317 aa13.1□□□□□ -0.31
PDE4DIP-248ENST00000619981 TMOD3Q9NYL9 352 aa13.1□□□□□ -0.31
PDE4DIP-248ENST00000619981 SBF2Q86WG5 1849 aa13.1□□□□□ -0.31
PDE4DIP-248ENST00000619981 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
PDE4DIP-248ENST00000619981 NHSQ6T4R5 1651 aa13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 BCL9O00512 1426 aa13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 TJP1Q07157 1748 aa13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 PIGBQ92521 554 aa13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 ACSBG1Q96GR2 724 aa13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 ZNF496Q96IT1 587 aaPredicted RBP13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 QTRT2Q9H974 415 aaKnown RBP13.09□□□□□ -0.31
PDE4DIP-248ENST00000619981 RGS12O14924 1447 aa13.08□□□□□ -0.32
PDE4DIP-248ENST00000619981 N4BP2Q86UW6 1770 aaPredicted RBP13.08□□□□□ -0.32
PDE4DIP-248ENST00000619981 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
PDE4DIP-248ENST00000619981 TRIM27P14373 513 aa13.08□□□□□ -0.32
PDE4DIP-248ENST00000619981 EIF2S2P20042 333 aaKnown RBP13.08□□□□□ -0.32
PDE4DIP-248ENST00000619981 G2E3Q7L622 706 aa13.08□□□□□ -0.32
PDE4DIP-248ENST00000619981 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
PDE4DIP-248ENST00000619981 BTAF1O14981 1849 aa13.08□□□□□ -0.32
PDE4DIP-248ENST00000619981 HOXB7P09629 217 aa13.07□□□□□ -0.32
PDE4DIP-248ENST00000619981 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
PDE4DIP-248ENST00000619981 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-248ENST00000619981 SYTL4Q96C24 671 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-248ENST00000619981 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
PDE4DIP-248ENST00000619981 ANXA1P04083 346 aa13.06□□□□□ -0.32
PDE4DIP-248ENST00000619981 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
PDE4DIP-248ENST00000619981 CCDC30Q5VVM6 783 aa13.06□□□□□ -0.32
PDE4DIP-248ENST00000619981 ATF7IPQ6VMQ6 1270 aa13.06□□□□□ -0.32
PDE4DIP-248ENST00000619981 SEPT12Q8IYM1 358 aa13.06□□□□□ -0.32
PDE4DIP-248ENST00000619981 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
PDE4DIP-248ENST00000619981 ASAP1Q9ULH1 1129 aa13.06□□□□□ -0.32
PDE4DIP-248ENST00000619981 COG6Q9Y2V7 657 aa13.06□□□□□ -0.32
PDE4DIP-248ENST00000619981 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
PDE4DIP-248ENST00000619981 PDE3AQ14432 1141 aa13.05□□□□□ -0.32
PDE4DIP-248ENST00000619981 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
PDE4DIP-248ENST00000619981 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
PDE4DIP-248ENST00000619981 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
PDE4DIP-248ENST00000619981 ATG3Q9NT62 314 aa13.05□□□□□ -0.32
PDE4DIP-248ENST00000619981 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
PDE4DIP-248ENST00000619981 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
PDE4DIP-248ENST00000619981 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
PDE4DIP-248ENST00000619981 TMEM57Q8N5G2 664 aa13.04□□□□□ -0.32
PDE4DIP-248ENST00000619981 ABCC4O15439 1325 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms