RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 SMIM5Q71RC9 77 aa10.99□□□□□ -0.65
CBWD1-227ENST00000618361 SMC1BQ8NDV3 1235 aa10.99□□□□□ -0.65
CBWD1-227ENST00000618361 CCDC87Q9NVE4 849 aa10.99□□□□□ -0.65
CBWD1-227ENST00000618361 UBR3Q6ZT12 1888 aa10.99□□□□□ -0.65
CBWD1-227ENST00000618361 TRAPPC3LQ5T215 181 aa10.98□□□□□ -0.65
CBWD1-227ENST00000618361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.651e-6■■■■□ 25.6
CBWD1-227ENST00000618361 FYB1O15117 783 aa10.97□□□□□ -0.65
CBWD1-227ENST00000618361 DPEP1P16444 411 aa10.97□□□□□ -0.65
CBWD1-227ENST00000618361 HOXD11P31277 338 aaPredicted RBP10.97□□□□□ -0.65
CBWD1-227ENST00000618361 ATP6V1AP38606 617 aa10.97□□□□□ -0.65
CBWD1-227ENST00000618361 ITPK1Q13572 414 aa10.97□□□□□ -0.65
CBWD1-227ENST00000618361 HSP90AB2PQ58FF8 381 aa10.97□□□□□ -0.65
CBWD1-227ENST00000618361 RRAGCQ9HB90 399 aa10.97□□□□□ -0.65
CBWD1-227ENST00000618361 TMOD3Q9NYL9 352 aa10.97□□□□□ -0.65
CBWD1-227ENST00000618361 SPG7Q9UQ90 795 aa10.97□□□□□ -0.65
CBWD1-227ENST00000618361 RTCBQ9Y3I0 505 aaKnown RBP10.97□□□□□ -0.65
CBWD1-227ENST00000618361 KIF13BQ9NQT8 1826 aa10.97□□□□□ -0.65
CBWD1-227ENST00000618361 FLT4P35916 1363 aa10.96□□□□□ -0.65
CBWD1-227ENST00000618361 ZC3H4Q9UPT8 1303 aaKnown RBP10.96□□□□□ -0.65
CBWD1-227ENST00000618361 SLC34A2O95436 690 aa10.96□□□□□ -0.65
CBWD1-227ENST00000618361 KCNA3P22001 575 aa10.96□□□□□ -0.65
CBWD1-227ENST00000618361 RC3H1Q5TC82 1133 aaKnown RBP10.96□□□□□ -0.65
CBWD1-227ENST00000618361 CNKSR2Q8WXI2 1034 aa10.96□□□□□ -0.65
CBWD1-227ENST00000618361 DCAF5Q96JK2 942 aa10.96□□□□□ -0.65
CBWD1-227ENST00000618361 SIN3AQ96ST3 1273 aa10.96□□□□□ -0.65
CBWD1-227ENST00000618361 PIM2Q9P1W9 311 aa10.96□□□□□ -0.65
CBWD1-227ENST00000618361 MAP2P11137 1827 aaKnown RBP10.95□□□□□ -0.66
CBWD1-227ENST00000618361 RGPD2P0DJD1 1756 aa10.95□□□□□ -0.66
CBWD1-227ENST00000618361 KIAA1551Q9HCM1 1747 aa10.95□□□□□ -0.66
CBWD1-227ENST00000618361 NCAPD2Q15021 1401 aa10.95□□□□□ -0.66
CBWD1-227ENST00000618361 HSPA1AP0DMV8 641 aaKnown RBP10.95□□□□□ -0.66
CBWD1-227ENST00000618361 HSPA1BP0DMV9 641 aaKnown RBP10.95□□□□□ -0.66
CBWD1-227ENST00000618361 PCDH10Q9P2E7 1040 aa10.95□□□□□ -0.66
CBWD1-227ENST00000618361 ASAP1Q9ULH1 1129 aa10.95□□□□□ -0.66
CBWD1-227ENST00000618361 PARP3Q9Y6F1 533 aa10.95□□□□□ -0.66
CBWD1-227ENST00000618361 GYS1P13807 737 aa10.94□□□□□ -0.66
CBWD1-227ENST00000618361 DALRD3Q5D0E6 543 aaKnown RBP10.94□□□□□ -0.66
CBWD1-227ENST00000618361 ARHGEF1Q92888 912 aaKnown RBP10.94□□□□□ -0.66
CBWD1-227ENST00000618361 TESK2Q96S53 571 aa10.94□□□□□ -0.66
CBWD1-227ENST00000618361 ATG3Q9NT62 314 aa10.94□□□□□ -0.66
CBWD1-227ENST00000618361 RNF181Q9P0P0 153 aa10.94□□□□□ -0.66
CBWD1-227ENST00000618361 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
CBWD1-227ENST00000618361 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
CBWD1-227ENST00000618361 CNTNAP4Q9C0A0 1308 aa10.93□□□□□ -0.66
CBWD1-227ENST00000618361 RPS6KA4O75676 772 aa10.93□□□□□ -0.66
CBWD1-227ENST00000618361 RFC4P35249 363 aa10.93□□□□□ -0.66
CBWD1-227ENST00000618361 NEUROD1Q13562 356 aa10.93□□□□□ -0.66
CBWD1-227ENST00000618361 IFNL2Q8IZJ0 200 aa10.93□□□□□ -0.66
CBWD1-227ENST00000618361 GGNBP2Q9H3C7 697 aa10.93□□□□□ -0.66
CBWD1-227ENST00000618361 KDRP35968 1356 aa10.92□□□□□ -0.66
CBWD1-227ENST00000618361 PHKG2P15735 406 aa10.92□□□□□ -0.66
CBWD1-227ENST00000618361 PKD1L3Q7Z443 1732 aa10.92□□□□□ -0.66
CBWD1-227ENST00000618361 ITGB4P16144 1822 aa10.91□□□□□ -0.66
CBWD1-227ENST00000618361 VEGFAP15692 232 aaPredicted RBP10.91□□□□□ -0.66
CBWD1-227ENST00000618361 C4AP0C0L4 1744 aa10.91□□□□□ -0.66
CBWD1-227ENST00000618361 N4BP2Q86UW6 1770 aaPredicted RBP10.9□□□□□ -0.66
CBWD1-227ENST00000618361 ERVV-2B6SEH9 535 aa10.9□□□□□ -0.66
CBWD1-227ENST00000618361 PCNTO95613 3336 aa10.9□□□□□ -0.66
CBWD1-227ENST00000618361 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
CBWD1-227ENST00000618361 ZNF831Q5JPB2 1677 aa10.89□□□□□ -0.67
CBWD1-227ENST00000618361 TNRC6CQ9HCJ0 1690 aaKnown RBP10.89□□□□□ -0.67
CBWD1-227ENST00000618361 ST20-MTHFSA0A0A6YYL1 179 aa10.89□□□□□ -0.67
CBWD1-227ENST00000618361 GLTPD2A6NH11 291 aa10.89□□□□□ -0.67
CBWD1-227ENST00000618361 SLC4A9Q96Q91 983 aa10.89□□□□□ -0.67
CBWD1-227ENST00000618361 KDM6AO15550 1401 aaPredicted RBP10.89□□□□□ -0.67
CBWD1-227ENST00000618361 BRCA1P38398 1863 aaKnown RBP10.89□□□□□ -0.67
CBWD1-227ENST00000618361 ARFGEF1Q9Y6D6 1849 aa10.88□□□□□ -0.67
CBWD1-227ENST00000618361 HSP90AB1P08238 724 aaKnown RBP10.88□□□□□ -0.67
CBWD1-227ENST00000618361 CACNB1Q02641 598 aaPredicted RBP10.88□□□□□ -0.67
CBWD1-227ENST00000618361 EYA1Q99502 592 aa10.88□□□□□ -0.67
CBWD1-227ENST00000618361 LMNB1P20700 586 aa10.87□□□□□ -0.67
CBWD1-227ENST00000618361 RBM42Q9BTD8 480 aaKnown RBP10.87□□□□□ -0.67
CBWD1-227ENST00000618361 PRDM10Q9NQV6 1147 aa10.87□□□□□ -0.67
CBWD1-227ENST00000618361 RNF216Q9NWF9 866 aaPredicted RBP10.87□□□□□ -0.67
CBWD1-227ENST00000618361 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
CBWD1-227ENST00000618361 USP42Q9H9J4 1324 aaKnown RBP10.86□□□□□ -0.67
CBWD1-227ENST00000618361 TM4SF1P30408 202 aa10.86□□□□□ -0.67
CBWD1-227ENST00000618361 DDR1Q08345 913 aa10.86□□□□□ -0.67
CBWD1-227ENST00000618361 FKBP8Q14318 412 aa10.86□□□□□ -0.67
CBWD1-227ENST00000618361 DPY19L2Q6NUT2 758 aa10.86□□□□□ -0.67
CBWD1-227ENST00000618361 AIDAQ96BJ3 306 aa10.86□□□□□ -0.67
CBWD1-227ENST00000618361 POLRMTO00411 1230 aaKnown RBP10.85□□□□□ -0.67
CBWD1-227ENST00000618361 CHRNA5P30532 468 aa10.85□□□□□ -0.67
CBWD1-227ENST00000618361 CDCA8Q53HL2 280 aa10.85□□□□□ -0.67
CBWD1-227ENST00000618361 CREBZFQ9NS37 354 aa10.85□□□□□ -0.67
CBWD1-227ENST00000618361 CRKLP46109 303 aaKnown RBP10.84□□□□□ -0.67
CBWD1-227ENST00000618361 CTCFP49711 727 aaPredicted RBP10.84□□□□□ -0.67
CBWD1-227ENST00000618361 PPM1GO15355 546 aaPredicted RBP10.83□□□□□ -0.68
CBWD1-227ENST00000618361 CABP4P57796 275 aa10.83□□□□□ -0.68
CBWD1-227ENST00000618361 RASSF7Q02833 373 aa10.83□□□□□ -0.68
CBWD1-227ENST00000618361 SRP68Q9UHB9 627 aaKnown RBP10.83□□□□□ -0.68
CBWD1-227ENST00000618361 POTECB2RU33 542 aa10.82□□□□□ -0.68
CBWD1-227ENST00000618361 AMOTQ4VCS5 1084 aa10.82□□□□□ -0.68
CBWD1-227ENST00000618361 TTLL6Q8N841 843 aa10.82□□□□□ -0.68
CBWD1-227ENST00000618361 CARD14Q9BXL6 1004 aa10.82□□□□□ -0.68
CBWD1-227ENST00000618361 MKRN1Q9UHC7 482 aaKnown RBP10.82□□□□□ -0.68
CBWD1-227ENST00000618361 COL5A3P25940 1745 aaPredicted RBP10.81□□□□□ -0.68
CBWD1-227ENST00000618361 FOXN1O15353 648 aa10.81□□□□□ -0.68
CBWD1-227ENST00000618361 ZPR1O75312 459 aa10.81□□□□□ -0.68
CBWD1-227ENST00000618361 PLEKHO1Q53GL0 409 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms