RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 RTL5Q5HYW3 569 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P24-202ENST00000615653 LBRQ14739 615 aaKnown RBP6.61□□□□□ -1.35
HMGB1P24-202ENST00000615653 PPP2R2DQ66LE6 453 aa6.61□□□□□ -1.35
HMGB1P24-202ENST00000615653 TAS1R3Q7RTX0 852 aa6.61□□□□□ -1.35
HMGB1P24-202ENST00000615653 RNF135Q8IUD6 432 aa6.61□□□□□ -1.35
HMGB1P24-202ENST00000615653 KRTAP4-9Q9BYQ8 210 aa6.61□□□□□ -1.35
HMGB1P24-202ENST00000615653 WASLO00401 505 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P24-202ENST00000615653 MCTP1Q6DN14 999 aa6.6□□□□□ -1.35
HMGB1P24-202ENST00000615653 SEPT12Q8IYM1 358 aa6.6□□□□□ -1.35
HMGB1P24-202ENST00000615653 TRIM11Q96F44 468 aa6.6□□□□□ -1.35
HMGB1P24-202ENST00000615653 ATXN7L1Q9ULK2 861 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P24-202ENST00000615653 ARAFP10398 606 aa6.59□□□□□ -1.35
HMGB1P24-202ENST00000615653 CTBSQ01459 385 aa6.59□□□□□ -1.35
HMGB1P24-202ENST00000615653 CHSY3Q70JA7 882 aa6.59□□□□□ -1.35
HMGB1P24-202ENST00000615653 NLRP3Q96P20 1036 aa6.59□□□□□ -1.35
HMGB1P24-202ENST00000615653 YBX3P16989 372 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGB1P24-202ENST00000615653 CTDSPL2Q05D32 466 aa6.58□□□□□ -1.36
HMGB1P24-202ENST00000615653 MYSM1Q5VVJ2 828 aa6.58□□□□□ -1.36
HMGB1P24-202ENST00000615653 DZIP3Q86Y13 1208 aaKnown RBP6.58□□□□□ -1.36
HMGB1P24-202ENST00000615653 PLVAPQ9BX97 442 aa6.58□□□□□ -1.36
HMGB1P24-202ENST00000615653 NDFIP2Q9NV92 336 aa6.58□□□□□ -1.36
HMGB1P24-202ENST00000615653 FGFR3P22607 806 aa6.57□□□□□ -1.36
HMGB1P24-202ENST00000615653 TXKP42681 527 aa6.57□□□□□ -1.36
HMGB1P24-202ENST00000615653 CLN3Q13286 438 aa6.57□□□□□ -1.36
HMGB1P24-202ENST00000615653 GPAMQ9HCL2 828 aa6.57□□□□□ -1.36
HMGB1P24-202ENST00000615653 NEURL1BA8MQ27 555 aa6.56□□□□□ -1.36
HMGB1P24-202ENST00000615653 ABHD17AQ96GS6 310 aa6.56□□□□□ -1.36
HMGB1P24-202ENST00000615653 PARP9Q8IXQ6 854 aa6.55□□□□□ -1.36
HMGB1P24-202ENST00000615653 FMNL2Q96PY5 1086 aa6.55□□□□□ -1.36
HMGB1P24-202ENST00000615653 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
HMGB1P24-202ENST00000615653 A0A1B0GTH6 734 aa6.54□□□□□ -1.36
HMGB1P24-202ENST00000615653 PAX4O43316 350 aa6.54□□□□□ -1.36
HMGB1P24-202ENST00000615653 BNIP3LO60238 219 aa6.54□□□□□ -1.36
HMGB1P24-202ENST00000615653 H2AFB1P0C5Y9 115 aa6.54□□□□□ -1.36
HMGB1P24-202ENST00000615653 H2AFB2P0C5Z0 115 aa6.54□□□□□ -1.36
HMGB1P24-202ENST00000615653 NR6A1Q15406 480 aa6.54□□□□□ -1.36
HMGB1P24-202ENST00000615653 LRRN4Q8WUT4 740 aa6.54□□□□□ -1.36
HMGB1P24-202ENST00000615653 COL17A1Q9UMD9 1497 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P24-202ENST00000615653 APBA3O96018 575 aa6.53□□□□□ -1.36
HMGB1P24-202ENST00000615653 ERVK-9P63128 1117 aa6.53□□□□□ -1.36
HMGB1P24-202ENST00000615653 CC2D2BQ6DHV5 1058 aa6.52□□□□□ -1.37
HMGB1P24-202ENST00000615653 BARGINQ6ZT62 677 aa6.52□□□□□ -1.37
HMGB1P24-202ENST00000615653 KLF15Q9UIH9 416 aa6.52□□□□□ -1.37
HMGB1P24-202ENST00000615653 SPDYE3A6NKU9 549 aa6.51□□□□□ -1.37
HMGB1P24-202ENST00000615653 CSB-PGBD3P0DP91 1061 aa6.51□□□□□ -1.37
HMGB1P24-202ENST00000615653 EFHC2Q5JST6 749 aa6.51□□□□□ -1.37
HMGB1P24-202ENST00000615653 PGBD3Q8N328 593 aa6.51□□□□□ -1.37
HMGB1P24-202ENST00000615653 RUBCNLQ9H714 662 aa6.51□□□□□ -1.37
HMGB1P24-202ENST00000615653 ADH6P28332 368 aa6.5□□□□□ -1.37
HMGB1P24-202ENST00000615653 PRRT3Q5FWE3 981 aa6.5□□□□□ -1.37
HMGB1P24-202ENST00000615653 CYP2U1Q7Z449 544 aa6.5□□□□□ -1.37
HMGB1P24-202ENST00000615653 FCHSD1Q86WN1 690 aa6.5□□□□□ -1.37
HMGB1P24-202ENST00000615653 CCDC125Q86Z20 511 aa6.5□□□□□ -1.37
HMGB1P24-202ENST00000615653 AVENQ9NQS1 362 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P24-202ENST00000615653 PHKA2P46019 1235 aa6.49□□□□□ -1.37
HMGB1P24-202ENST00000615653 FZD5Q13467 585 aa6.49□□□□□ -1.37
HMGB1P24-202ENST00000615653 MSX1P28360 303 aa6.48□□□□□ -1.37
HMGB1P24-202ENST00000615653 CLK2P49760 499 aaKnown RBP6.48□□□□□ -1.37
HMGB1P24-202ENST00000615653 NACC1Q96RE7 527 aa6.48□□□□□ -1.37
HMGB1P24-202ENST00000615653 ARHGEF10LQ9HCE6 1279 aa6.48□□□□□ -1.37
HMGB1P24-202ENST00000615653 SLC24A1O60721 1099 aa6.47□□□□□ -1.37
HMGB1P24-202ENST00000615653 CRISPLD1Q9H336 500 aa6.47□□□□□ -1.37
HMGB1P24-202ENST00000615653 TRAK2O60296 914 aa6.46□□□□□ -1.38
HMGB1P24-202ENST00000615653 GIGYF1O75420 1035 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P24-202ENST00000615653 CENPCQ03188 943 aa6.46□□□□□ -1.38
HMGB1P24-202ENST00000615653 FAM182BQ5T319 152 aa6.46□□□□□ -1.38
HMGB1P24-202ENST00000615653 ESYT1Q9BSJ8 1104 aa6.46□□□□□ -1.38
HMGB1P24-202ENST00000615653 ZMYND10O75800 440 aa6.45□□□□□ -1.38
HMGB1P24-202ENST00000615653 ELNP15502 786 aa6.45□□□□□ -1.38
HMGB1P24-202ENST00000615653 FIGNL1Q6PIW4 674 aa6.45□□□□□ -1.38
HMGB1P24-202ENST00000615653 PNMA1Q8ND90 353 aa6.45□□□□□ -1.38
HMGB1P24-202ENST00000615653 OSBPL3Q9H4L5 887 aa6.45□□□□□ -1.38
HMGB1P24-202ENST00000615653 PCDHGC4Q9Y5F7 938 aa6.45□□□□□ -1.38
HMGB1P24-202ENST00000615653 HRH3Q9Y5N1 445 aa6.45□□□□□ -1.38
HMGB1P24-202ENST00000615653 C4orf17Q53FE4 359 aa6.44□□□□□ -1.38
HMGB1P24-202ENST00000615653 CNKSR1Q969H4 720 aa6.44□□□□□ -1.38
HMGB1P24-202ENST00000615653 ZSCAN10Q96SZ4 725 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P24-202ENST00000615653 ZCCHC2Q9C0B9 1178 aaKnown RBP6.44□□□□□ -1.38
HMGB1P24-202ENST00000615653 DNAAF2Q9NVR5 837 aaKnown RBP6.44□□□□□ -1.38
HMGB1P24-202ENST00000615653 HCN2Q9UL51 889 aa6.44□□□□□ -1.38
HMGB1P24-202ENST00000615653 IL2RAP01589 272 aa6.43□□□□□ -1.38
HMGB1P24-202ENST00000615653 SCTRP47872 440 aa6.43□□□□□ -1.38
HMGB1P24-202ENST00000615653 GNASQ5JWF2 1037 aa6.43□□□□□ -1.38
HMGB1P24-202ENST00000615653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGB1P24-202ENST00000615653 FAM229AH3BQW9 127 aa6.42□□□□□ -1.38
HMGB1P24-202ENST00000615653 GNRH1P01148 92 aa6.42□□□□□ -1.38
HMGB1P24-202ENST00000615653 COL9A3Q14050 684 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P24-202ENST00000615653 EPS8L1Q8TE68 723 aa6.42□□□□□ -1.38
HMGB1P24-202ENST00000615653 FHDC1Q9C0D6 1143 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P24-202ENST00000615653 RNF112Q9ULX5 631 aa6.42□□□□□ -1.38
HMGB1P24-202ENST00000615653 TRIM66O15016 1216 aa6.41□□□□□ -1.38
HMGB1P24-202ENST00000615653 TRIM28Q13263 835 aaKnown RBP6.41□□□□□ -1.38
HMGB1P24-202ENST00000615653 ADGRE1Q14246 886 aa6.41□□□□□ -1.38
HMGB1P24-202ENST00000615653 RAB6BQ9NRW1 208 aa6.41□□□□□ -1.38
HMGB1P24-202ENST00000615653 C9orf172C9J069 976 aa6.4□□□□□ -1.38
HMGB1P24-202ENST00000615653 GRIK4Q16099 956 aa6.4□□□□□ -1.38
HMGB1P24-202ENST00000615653 ZNF468Q5VIY5 522 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P24-202ENST00000615653 RNF20Q5VTR2 975 aa6.4□□□□□ -1.38
HMGB1P24-202ENST00000615653 NLRP8Q86W28 1048 aa6.4□□□□□ -1.38
HMGB1P24-202ENST00000615653 XAGE2Q96GT9 111 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms