RNA–Protein interactions for RNA: ENST00000614096.4

UBE3A-207, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE3A, Length 8,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-207ENST00000614096 TSNARE1Q96NA8 513 aa17.12■□□□□ 0.33
UBE3A-207ENST00000614096 RAB34Q9BZG1 259 aa17.12■□□□□ 0.33
UBE3A-207ENST00000614096 HLTFQ14527 1009 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■□□ 14.6
UBE3A-207ENST00000614096 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
UBE3A-207ENST00000614096 TACC1O75410 805 aa17.11■□□□□ 0.33
UBE3A-207ENST00000614096 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
UBE3A-207ENST00000614096 CCDC178Q5BJE1 867 aa17.11■□□□□ 0.33
UBE3A-207ENST00000614096 TSPYL4Q9UJ04 414 aa17.11■□□□□ 0.33
UBE3A-207ENST00000614096 CETN1Q12798 172 aa17.11■□□□□ 0.33
UBE3A-207ENST00000614096 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
UBE3A-207ENST00000614096 B4GALNT4Q76KP1 1039 aa17.11■□□□□ 0.33
UBE3A-207ENST00000614096 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
UBE3A-207ENST00000614096 DHX57Q6P158 1386 aaKnown RBP17.11■□□□□ 0.33
UBE3A-207ENST00000614096 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
UBE3A-207ENST00000614096 RIC3Q7Z5B4 369 aa17.11■□□□□ 0.33
UBE3A-207ENST00000614096 DHX29Q7Z478 1369 aaKnown RBP17.11■□□□□ 0.33
UBE3A-207ENST00000614096 UVSSAQ2YD98 709 aa17.1■□□□□ 0.33
UBE3A-207ENST00000614096 MIPOL1Q8TD10 442 aa17.1■□□□□ 0.33
UBE3A-207ENST00000614096 SH2B1Q9NRF2 756 aaPredicted RBP17.1■□□□□ 0.33
UBE3A-207ENST00000614096 ZHX1Q9UKY1 873 aaPredicted RBP17.1■□□□□ 0.33
UBE3A-207ENST00000614096 CCDC160A6NGH7 325 aa17.1■□□□□ 0.33
UBE3A-207ENST00000614096 MKRN1Q9UHC7 482 aaKnown RBP17.1■□□□□ 0.33
UBE3A-207ENST00000614096 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
UBE3A-207ENST00000614096 KIF4AO95239 1232 aa17.1■□□□□ 0.33
UBE3A-207ENST00000614096 RNF168Q8IYW5 571 aaPredicted RBP17.1■□□□□ 0.33
UBE3A-207ENST00000614096 C16orf45Q96MC5 204 aaPredicted RBP17.1■□□□□ 0.33
UBE3A-207ENST00000614096 SMC6Q96SB8 1091 aa17.1■□□□□ 0.33
UBE3A-207ENST00000614096 HS1BP3Q53T59 392 aa17.1■□□□□ 0.33
UBE3A-207ENST00000614096 STX1AQ16623 288 aa17.09■□□□□ 0.33
UBE3A-207ENST00000614096 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
UBE3A-207ENST00000614096 SETD1BQ9UPS6 1966 aaKnown RBP17.09■□□□□ 0.33
UBE3A-207ENST00000614096 CCDC196A0A1B0GTZ2 297 aa17.09■□□□□ 0.33
UBE3A-207ENST00000614096 SOGA3Q5TF21 947 aa17.09■□□□□ 0.33
UBE3A-207ENST00000614096 CEP135Q66GS9 1140 aa17.09■□□□□ 0.33
UBE3A-207ENST00000614096 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
UBE3A-207ENST00000614096 NUP88Q99567 741 aaPredicted RBP17.09■□□□□ 0.33
UBE3A-207ENST00000614096 SMG6Q86US8 1419 aaKnown RBP17.09■□□□□ 0.33
UBE3A-207ENST00000614096 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.33
UBE3A-207ENST00000614096 OTUD6BQ8N6M0 293 aa17.08■□□□□ 0.33
UBE3A-207ENST00000614096 PANK1Q8TE04 598 aa17.08■□□□□ 0.33
UBE3A-207ENST00000614096 CCDC121Q6ZUS5 278 aa17.08■□□□□ 0.32
UBE3A-207ENST00000614096 LTV1Q96GA3 475 aaPredicted RBP17.08■□□□□ 0.32
UBE3A-207ENST00000614096 ZNF287Q9HBT7 754 aa17.08■□□□□ 0.32
UBE3A-207ENST00000614096 TCHPQ9BT92 498 aa17.08■□□□□ 0.32
UBE3A-207ENST00000614096 RASSF4Q9H2L5 321 aa17.08■□□□□ 0.32
UBE3A-207ENST00000614096 MAP3K9P80192 1104 aa17.08■□□□□ 0.32
UBE3A-207ENST00000614096 LUC7L2Q9Y383 392 aaKnown RBP17.08■□□□□ 0.32
UBE3A-207ENST00000614096 KANK3Q6NY19 840 aa17.08■□□□□ 0.32
UBE3A-207ENST00000614096 RASAL2Q9UJF2 1139 aa17.08■□□□□ 0.32
UBE3A-207ENST00000614096 PRPHP41219 470 aa17.07■□□□□ 0.32
UBE3A-207ENST00000614096 TTC12Q9H892 705 aaPredicted RBP17.07■□□□□ 0.32
UBE3A-207ENST00000614096 CFAP65Q6ZU64 1925 aaKnown RBP17.07■□□□□ 0.32
UBE3A-207ENST00000614096 RBM25P49756 843 aaKnown RBP17.07■□□□□ 0.32
UBE3A-207ENST00000614096 DHX37Q8IY37 1157 aaKnown RBP17.07■□□□□ 0.32
UBE3A-207ENST00000614096 IFT74Q96LB3 600 aa17.07■□□□□ 0.32
UBE3A-207ENST00000614096 EVA1CP58658 441 aa17.07■□□□□ 0.32
UBE3A-207ENST00000614096 PPP1R14CQ8TAE6 165 aa17.07■□□□□ 0.32
UBE3A-207ENST00000614096 A0A1W2PRG0 241 aa17.06■□□□□ 0.32
UBE3A-207ENST00000614096 DDX19AQ9NUU7 478 aaKnown RBP17.06■□□□□ 0.32
UBE3A-207ENST00000614096 LRRC45Q96CN5 670 aa17.06■□□□□ 0.32
UBE3A-207ENST00000614096 ZBTB17Q13105 803 aa17.05■□□□□ 0.32
UBE3A-207ENST00000614096 CCDC94Q9BW85 323 aaPredicted RBP17.05■□□□□ 0.32
UBE3A-207ENST00000614096 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
UBE3A-207ENST00000614096 JAKMIP2Q96AA8 810 aa17.05■□□□□ 0.32
UBE3A-207ENST00000614096 SELENOOQ9BVL4 669 aa17.05■□□□□ 0.32
UBE3A-207ENST00000614096 MAP4K4O95819 1239 aaPredicted RBP17.05■□□□□ 0.32
UBE3A-207ENST00000614096 ATP2B1P20020 1258 aa17.05■□□□□ 0.32
UBE3A-207ENST00000614096 IQCGQ9H095 443 aaKnown RBP17.05■□□□□ 0.32
UBE3A-207ENST00000614096 MAATS1Q7Z4T9 603 aa17.05■□□□□ 0.32
UBE3A-207ENST00000614096 CLCN1P35523 988 aa17.05■□□□□ 0.32
UBE3A-207ENST00000614096 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
UBE3A-207ENST00000614096 CTNNA2P26232 953 aa17.04■□□□□ 0.32
UBE3A-207ENST00000614096 ATP11AP98196 1134 aa17.04■□□□□ 0.32
UBE3A-207ENST00000614096 ZHX3Q9H4I2 956 aa17.04■□□□□ 0.32
UBE3A-207ENST00000614096 KIF21BO75037 1637 aa17.04■□□□□ 0.32
UBE3A-207ENST00000614096 RAB3IL1Q8TBN0 382 aa17.04■□□□□ 0.32
UBE3A-207ENST00000614096 A0A1B0GUL7 405 aa17.04■□□□□ 0.32
UBE3A-207ENST00000614096 CTAGE9A4FU28 777 aa17.04■□□□□ 0.32
UBE3A-207ENST00000614096 LACTBP83111 547 aaPredicted RBP17.03■□□□□ 0.32
UBE3A-207ENST00000614096 CEP128Q6ZU80 1094 aa17.03■□□□□ 0.32
UBE3A-207ENST00000614096 ARFGAP2Q8N6H7 521 aa17.03■□□□□ 0.32
UBE3A-207ENST00000614096 VCX3BQ9H321 246 aa17.03■□□□□ 0.32
UBE3A-207ENST00000614096 FAM114A2Q9NRY5 505 aa17.03■□□□□ 0.32
UBE3A-207ENST00000614096 TNIP1Q15025 636 aa17.03■□□□□ 0.32
UBE3A-207ENST00000614096 CTAGE1Q96RT6 745 aa17.03■□□□□ 0.32
UBE3A-207ENST00000614096 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
UBE3A-207ENST00000614096 SUDS3Q9H7L9 328 aaPredicted RBP17.03■□□□□ 0.32
UBE3A-207ENST00000614096 PDRG1Q9NUG6 133 aa17.03■□□□□ 0.32
UBE3A-207ENST00000614096 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
UBE3A-207ENST00000614096 CEP57Q86XR8 500 aa17.02■□□□□ 0.32
UBE3A-207ENST00000614096 ACTN2P35609 894 aa17.02■□□□□ 0.32
UBE3A-207ENST00000614096 CACNA2D3Q8IZS8 1091 aa17.02■□□□□ 0.32
UBE3A-207ENST00000614096 CWC25Q9NXE8 425 aaPredicted RBP17.02■□□□□ 0.32
UBE3A-207ENST00000614096 CAPN2P17655 700 aa17.02■□□□□ 0.32
UBE3A-207ENST00000614096 KIF6Q6ZMV9 814 aa17.02■□□□□ 0.32
UBE3A-207ENST00000614096 CHD1LQ86WJ1 897 aa17.02■□□□□ 0.32
UBE3A-207ENST00000614096 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
UBE3A-207ENST00000614096 CCDC77Q9BR77 488 aa17.02■□□□□ 0.31
UBE3A-207ENST00000614096 KIAA0753Q2KHM9 967 aa17.02■□□□□ 0.31
UBE3A-207ENST00000614096 JADE2Q9NQC1 790 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms