RNA–Protein interactions for RNA: ENST00000612093.1

CSPG4P10-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

TSL 2 BASIC

Gene CSPG4P10, Length 3,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-202ENST00000612093 ZNF428Q96B54 188 aa14□□□□□ -0.17
CSPG4P10-202ENST00000612093 COL18A1P39060 1754 aa14□□□□□ -0.17
CSPG4P10-202ENST00000612093 FOXD4L6Q3SYB3 417 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P10-202ENST00000612093 FOXD4L3Q6VB84 417 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P10-202ENST00000612093 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
CSPG4P10-202ENST00000612093 NECTIN2Q92692 538 aa13.99□□□□□ -0.17
CSPG4P10-202ENST00000612093 C1orf141Q5JVX7 400 aa13.99□□□□□ -0.17
CSPG4P10-202ENST00000612093 NCAPD2Q15021 1401 aa13.99□□□□□ -0.17
CSPG4P10-202ENST00000612093 TAF7Q15545 349 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P10-202ENST00000612093 LRRC37A3O60309 1634 aa13.98□□□□□ -0.17
CSPG4P10-202ENST00000612093 CPDO75976 1380 aa13.98□□□□□ -0.17
CSPG4P10-202ENST00000612093 AMOTQ4VCS5 1084 aa13.98□□□□□ -0.17
CSPG4P10-202ENST00000612093 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
CSPG4P10-202ENST00000612093 RRAGDQ9NQL2 400 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P10-202ENST00000612093 NHSL1Q5SYE7 1610 aa13.97□□□□□ -0.17
CSPG4P10-202ENST00000612093 CAMTA1Q9Y6Y1 1673 aa13.97□□□□□ -0.17
CSPG4P10-202ENST00000612093 MEGF6O75095 1541 aa13.97□□□□□ -0.17
CSPG4P10-202ENST00000612093 BRPF1P55201 1214 aaPredicted RBP13.96□□□□□ -0.17
CSPG4P10-202ENST00000612093 TEFQ10587 303 aa13.96□□□□□ -0.17
CSPG4P10-202ENST00000612093 STRN4Q9NRL3 753 aa13.96□□□□□ -0.17
CSPG4P10-202ENST00000612093 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.17
CSPG4P10-202ENST00000612093 LTBP4Q8N2S1 1624 aa13.96□□□□□ -0.17
CSPG4P10-202ENST00000612093 NOL8Q76FK4 1167 aaKnown RBP13.96□□□□□ -0.17
CSPG4P10-202ENST00000612093 KCNQ3O43525 872 aa13.96□□□□□ -0.18
CSPG4P10-202ENST00000612093 TATP17735 454 aaPredicted RBP13.96□□□□□ -0.18
CSPG4P10-202ENST00000612093 ROBO1Q9Y6N7 1651 aa13.96□□□□□ -0.18
CSPG4P10-202ENST00000612093 RNMTO43148 476 aaKnown RBP13.95□□□□□ -0.18
CSPG4P10-202ENST00000612093 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
CSPG4P10-202ENST00000612093 TOM1L2Q6ZVM7 507 aa13.95□□□□□ -0.18
CSPG4P10-202ENST00000612093 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
CSPG4P10-202ENST00000612093 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
CSPG4P10-202ENST00000612093 LMO7Q8WWI1 1683 aa13.95□□□□□ -0.18
CSPG4P10-202ENST00000612093 C22orf23Q9BZE7 217 aa13.95□□□□□ -0.18
CSPG4P10-202ENST00000612093 HSP90AB1P08238 724 aaKnown RBP13.95□□□□□ -0.18
CSPG4P10-202ENST00000612093 FAM208AQ9UK61 1670 aaKnown RBP13.94□□□□□ -0.18
CSPG4P10-202ENST00000612093 RWDD1Q9H446 243 aaPredicted RBP13.94□□□□□ -0.18
CSPG4P10-202ENST00000612093 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
CSPG4P10-202ENST00000612093 PIP4K2BP78356 416 aa13.94□□□□□ -0.18
CSPG4P10-202ENST00000612093 ANKRD45Q5TZF3 282 aa13.94□□□□□ -0.18
CSPG4P10-202ENST00000612093 MPNDQ8N594 471 aa13.94□□□□□ -0.18
CSPG4P10-202ENST00000612093 ABCA3Q99758 1704 aa13.94□□□□□ -0.18
CSPG4P10-202ENST00000612093 G2E3Q7L622 706 aa13.93□□□□□ -0.18
CSPG4P10-202ENST00000612093 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
CSPG4P10-202ENST00000612093 ARHGAP45Q92619 1136 aa13.93□□□□□ -0.18
CSPG4P10-202ENST00000612093 WDR17Q8IZU2 1322 aa13.92□□□□□ -0.18
CSPG4P10-202ENST00000612093 LARP1Q6PKG0 1096 aaKnown RBP13.92□□□□□ -0.18
CSPG4P10-202ENST00000612093 API5Q9BZZ5 524 aaKnown RBP13.92□□□□□ -0.18
CSPG4P10-202ENST00000612093 ABCC4O15439 1325 aa13.92□□□□□ -0.18
CSPG4P10-202ENST00000612093 DTNBO60941 627 aa13.92□□□□□ -0.18
CSPG4P10-202ENST00000612093 EVA1CP58658 441 aa13.92□□□□□ -0.18
CSPG4P10-202ENST00000612093 SPG7Q9UQ90 795 aa13.92□□□□□ -0.18
CSPG4P10-202ENST00000612093 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P10-202ENST00000612093 EIF2S2P20042 333 aaKnown RBP13.91□□□□□ -0.18
CSPG4P10-202ENST00000612093 HSCBQ8IWL3 235 aa13.91□□□□□ -0.18
CSPG4P10-202ENST00000612093 ZBTB40Q9NUA8 1239 aa13.91□□□□□ -0.18
CSPG4P10-202ENST00000612093 CHAMP1Q96JM3 812 aa13.91□□□□□ -0.18
CSPG4P10-202ENST00000612093 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
CSPG4P10-202ENST00000612093 ABCC6O95255 1503 aa13.91□□□□□ -0.18
CSPG4P10-202ENST00000612093 CYP27B1O15528 508 aa13.9□□□□□ -0.18
CSPG4P10-202ENST00000612093 PHKG2P15735 406 aa13.9□□□□□ -0.18
CSPG4P10-202ENST00000612093 EIF4A1P60842 406 aaKnown RBP13.9□□□□□ -0.18
CSPG4P10-202ENST00000612093 STK31Q9BXU1 1019 aa13.9□□□□□ -0.18
CSPG4P10-202ENST00000612093 F6X3S4 739 aa13.9□□□□□ -0.18
CSPG4P10-202ENST00000612093 XRCC6P12956 609 aaKnown RBP eCLIP13.9□□□□□ -0.18
CSPG4P10-202ENST00000612093 TRAK2O60296 914 aa13.9□□□□□ -0.18
CSPG4P10-202ENST00000612093 AAMPQ13685 434 aa13.9□□□□□ -0.18
CSPG4P10-202ENST00000612093 HDGFL1Q5TGJ6 251 aa13.9□□□□□ -0.18
CSPG4P10-202ENST00000612093 BABAM1Q9NWV8 329 aa13.89□□□□□ -0.19
CSPG4P10-202ENST00000612093 BTG4Q9NY30 223 aa13.89□□□□□ -0.19
CSPG4P10-202ENST00000612093 RGS12O14924 1447 aa13.89□□□□□ -0.19
CSPG4P10-202ENST00000612093 KDM6AO15550 1401 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P10-202ENST00000612093 SLC39A6Q13433 755 aa13.89□□□□□ -0.19
CSPG4P10-202ENST00000612093 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
CSPG4P10-202ENST00000612093 ZBTB7BO15156 539 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P10-202ENST00000612093 SLC4A10Q6U841 1118 aa13.89□□□□□ -0.19
CSPG4P10-202ENST00000612093 IFNL2Q8IZJ0 200 aa13.88□□□□□ -0.19
CSPG4P10-202ENST00000612093 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
CSPG4P10-202ENST00000612093 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
CSPG4P10-202ENST00000612093 ANXA1P04083 346 aa13.87□□□□□ -0.19
CSPG4P10-202ENST00000612093 KDM3BQ7LBC6 1761 aa13.87□□□□□ -0.19
CSPG4P10-202ENST00000612093 ADAMTS2O95450 1211 aa13.87□□□□□ -0.19
CSPG4P10-202ENST00000612093 FKBP5Q13451 457 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P10-202ENST00000612093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
CSPG4P10-202ENST00000612093 PTPRCP08575 1304 aa13.87□□□□□ -0.19
CSPG4P10-202ENST00000612093 MCM4P33991 863 aa13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 FLIIQ13045 1269 aa13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 TRIM44Q96DX7 344 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 AHDC1Q5TGY3 1603 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 PHAXQ9H814 394 aaKnown RBP13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 OVOS2A0A0G2JMS6 1433 aa13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 DDX54Q8TDD1 881 aaKnown RBP13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 TBC1D32Q96NH3 1257 aa13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 CARD10Q9BWT7 1032 aa13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 SLC52A2Q9HAB3 445 aa13.86□□□□□ -0.19
CSPG4P10-202ENST00000612093 ZCRB1Q8TBF4 217 aaKnown RBP13.85□□□□□ -0.19
CSPG4P10-202ENST00000612093 CHPF2Q9P2E5 772 aa13.85□□□□□ -0.19
CSPG4P10-202ENST00000612093 NUTM2BA6NNL0 878 aaPredicted RBP13.85□□□□□ -0.19
CSPG4P10-202ENST00000612093 NUTM2EB1AL46 878 aaPredicted RBP13.85□□□□□ -0.19
CSPG4P10-202ENST00000612093 IL2RBP14784 551 aa13.85□□□□□ -0.19
CSPG4P10-202ENST00000612093 NUTM2AQ8IVF1 878 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms