RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 NUTM2EB1AL46 878 aaPredicted RBP15.73■□□□□ 0.11
CBWD1-220ENST00000612045 NUTM2AQ8IVF1 878 aaPredicted RBP15.73■□□□□ 0.11
CBWD1-220ENST00000612045 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
CBWD1-220ENST00000612045 ARHGAP45Q92619 1136 aa15.73■□□□□ 0.11
CBWD1-220ENST00000612045 SOS1Q07889 1333 aaPredicted RBP15.72■□□□□ 0.11
CBWD1-220ENST00000612045 SIPA1L3O60292 1781 aaPredicted RBP15.72■□□□□ 0.11
CBWD1-220ENST00000612045 SCN11AQ9UI33 1791 aa15.72■□□□□ 0.11
CBWD1-220ENST00000612045 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
CBWD1-220ENST00000612045 DCAF5Q96JK2 942 aa15.72■□□□□ 0.11
CBWD1-220ENST00000612045 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
CBWD1-220ENST00000612045 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
CBWD1-220ENST00000612045 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
CBWD1-220ENST00000612045 EIF4A1P60842 406 aaKnown RBP15.71■□□□□ 0.11
CBWD1-220ENST00000612045 JCADQ9P266 1359 aa15.71■□□□□ 0.11
CBWD1-220ENST00000612045 PLCH1Q4KWH8 1693 aa15.71■□□□□ 0.11
CBWD1-220ENST00000612045 MVPQ14764 893 aaKnown RBP15.71■□□□□ 0.1
CBWD1-220ENST00000612045 SLC52A2Q9HAB3 445 aa15.71■□□□□ 0.1
CBWD1-220ENST00000612045 KCNQ3O43525 872 aa15.7■□□□□ 0.1
CBWD1-220ENST00000612045 AAMPQ13685 434 aa15.69■□□□□ 0.1
CBWD1-220ENST00000612045 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
CBWD1-220ENST00000612045 TMEM57Q8N5G2 664 aa15.68■□□□□ 0.1
CBWD1-220ENST00000612045 MRC1P22897 1456 aa15.68■□□□□ 0.1
CBWD1-220ENST00000612045 HOXB7P09629 217 aa15.68■□□□□ 0.1
CBWD1-220ENST00000612045 CCDC30Q5VVM6 783 aa15.68■□□□□ 0.1
CBWD1-220ENST00000612045 NRAPQ86VF7 1730 aa15.68■□□□□ 0.1
CBWD1-220ENST00000612045 NFATC2IPQ8NCF5 419 aa15.68■□□□□ 0.1
CBWD1-220ENST00000612045 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
CBWD1-220ENST00000612045 API5Q9BZZ5 524 aaKnown RBP15.68■□□□□ 0.1
CBWD1-220ENST00000612045 DISP2A7MBM2 1401 aa15.67■□□□□ 0.1
CBWD1-220ENST00000612045 NKX1-1Q15270 411 aaPredicted RBP15.67■□□□□ 0.1
CBWD1-220ENST00000612045 ITPRIPQ8IWB1 547 aa15.67■□□□□ 0.1
CBWD1-220ENST00000612045 ABCC4O15439 1325 aa15.66■□□□□ 0.1
CBWD1-220ENST00000612045 DDX54Q8TDD1 881 aaKnown RBP15.66■□□□□ 0.1
CBWD1-220ENST00000612045 STK31Q9BXU1 1019 aa15.66■□□□□ 0.1
CBWD1-220ENST00000612045 DDX19BQ9UMR2 479 aa15.66■□□□□ 0.1
CBWD1-220ENST00000612045 SLIT2O94813 1529 aa15.66■□□□□ 0.1
CBWD1-220ENST00000612045 PTPRCP08575 1304 aa15.66■□□□□ 0.1
CBWD1-220ENST00000612045 NWD2Q9ULI1 1742 aa15.66■□□□□ 0.1
CBWD1-220ENST00000612045 HEG1Q9ULI3 1381 aa15.65■□□□□ 0.1
CBWD1-220ENST00000612045 HDGFL1Q5TGJ6 251 aa15.65■□□□□ 0.1
CBWD1-220ENST00000612045 ZNF790Q6PG37 636 aa15.65■□□□□ 0.1
CBWD1-220ENST00000612045 NECTIN2Q92692 538 aa15.65■□□□□ 0.1
CBWD1-220ENST00000612045 CABP4P57796 275 aa15.64■□□□□ 0.09
CBWD1-220ENST00000612045 CHMP4AQ9BY43 222 aa15.64■□□□□ 0.09
CBWD1-220ENST00000612045 SPATA31A1Q5TZJ5 1347 aa15.64■□□□□ 0.09
CBWD1-220ENST00000612045 KDM2BQ8NHM5 1336 aa15.64■□□□□ 0.09
CBWD1-220ENST00000612045 ERVV-2B6SEH9 535 aa15.64■□□□□ 0.09
CBWD1-220ENST00000612045 GIGYF1O75420 1035 aaPredicted RBP15.64■□□□□ 0.09
CBWD1-220ENST00000612045 SLC39A6Q13433 755 aa15.64■□□□□ 0.09
CBWD1-220ENST00000612045 RGS12O14924 1447 aa15.63■□□□□ 0.09
CBWD1-220ENST00000612045 CACNA1FO60840 1977 aa15.63■□□□□ 0.09
CBWD1-220ENST00000612045 SPATA31A6Q5VVP1 1343 aa15.63■□□□□ 0.09
CBWD1-220ENST00000612045 G2E3Q7L622 706 aa15.63■□□□□ 0.09
CBWD1-220ENST00000612045 THRAP3Q9Y2W1 955 aaKnown RBP15.63■□□□□ 0.09
CBWD1-220ENST00000612045 EIF2S2P20042 333 aaKnown RBP15.62■□□□□ 0.09
CBWD1-220ENST00000612045 CENPQQ7L2Z9 268 aaPredicted RBP15.62■□□□□ 0.09
CBWD1-220ENST00000612045 WNK3Q9BYP7 1800 aa15.62■□□□□ 0.09
CBWD1-220ENST00000612045 HSPA1LP34931 641 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 C8orf37Q96NL8 207 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 CDCA7Q9BWT1 371 aaPredicted RBP15.61■□□□□ 0.09
CBWD1-220ENST00000612045 PCDHB15Q9Y5E8 787 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 SPATA31A5Q5VU36 1347 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 SPATA31A7Q8IWB4 1347 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 FLIIQ13045 1269 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 UNC5CLQ8IV45 518 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 TTC5Q8N0Z6 440 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 NGLY1Q96IV0 654 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 ZBTB40Q9NUA8 1239 aa15.61■□□□□ 0.09
CBWD1-220ENST00000612045 EXOC5O00471 708 aa15.6■□□□□ 0.09
CBWD1-220ENST00000612045 INTS3Q68E01 1043 aaKnown RBP15.6■□□□□ 0.09
CBWD1-220ENST00000612045 LRP6O75581 1613 aa15.6■□□□□ 0.09
CBWD1-220ENST00000612045 PRAMEF22A3QJZ6 481 aa15.59■□□□□ 0.09
CBWD1-220ENST00000612045 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
CBWD1-220ENST00000612045 ZNF496Q96IT1 587 aaPredicted RBP15.59■□□□□ 0.09
CBWD1-220ENST00000612045 CHMP4BQ9H444 224 aaKnown RBP15.59■□□□□ 0.09
CBWD1-220ENST00000612045 CHPF2Q9P2E5 772 aa15.59■□□□□ 0.09
CBWD1-220ENST00000612045 TNS2Q63HR2 1409 aa15.59■□□□□ 0.09
CBWD1-220ENST00000612045 BCL9LQ86UU0 1499 aa15.59■□□□□ 0.09
CBWD1-220ENST00000612045 IGHDP01880 384 aa15.59■□□□□ 0.09
CBWD1-220ENST00000612045 FNBP4Q8N3X1 1017 aaPredicted RBP15.59■□□□□ 0.09
CBWD1-220ENST00000612045 CCDC9Q9Y3X0 531 aaKnown RBP15.59■□□□□ 0.09
CBWD1-220ENST00000612045 FKBP5Q13451 457 aaPredicted RBP15.58■□□□□ 0.08
CBWD1-220ENST00000612045 FMNL2Q96PY5 1086 aa15.58■□□□□ 0.08
CBWD1-220ENST00000612045 TOGARAM1Q9Y4F4 1720 aa15.58■□□□□ 0.08
CBWD1-220ENST00000612045 BARGINQ6ZT62 677 aa15.57■□□□□ 0.08
CBWD1-220ENST00000612045 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
CBWD1-220ENST00000612045 F6X3S4 739 aa15.57■□□□□ 0.08
CBWD1-220ENST00000612045 SNRPA1P09661 255 aaKnown RBP15.57■□□□□ 0.08
CBWD1-220ENST00000612045 VPS72Q15906 364 aa15.57■□□□□ 0.08
CBWD1-220ENST00000612045 PHAXQ9H814 394 aaKnown RBP15.57■□□□□ 0.08
CBWD1-220ENST00000612045 C5P01031 1676 aa15.56■□□□□ 0.08
CBWD1-220ENST00000612045 DDB1Q16531 1140 aa15.56■□□□□ 0.08
CBWD1-220ENST00000612045 TMOD3Q9NYL9 352 aa15.56■□□□□ 0.08
CBWD1-220ENST00000612045 CCT4P50991 539 aaKnown RBP15.55■□□□□ 0.08
CBWD1-220ENST00000612045 SLC4A10Q6U841 1118 aa15.55■□□□□ 0.08
CBWD1-220ENST00000612045 RWDD1Q9H446 243 aaPredicted RBP15.55■□□□□ 0.08
CBWD1-220ENST00000612045 PAPPAQ13219 1627 aa15.55■□□□□ 0.08
CBWD1-220ENST00000612045 ANXA1P04083 346 aa15.54■□□□□ 0.08
CBWD1-220ENST00000612045 GLI3P10071 1580 aa15.54■□□□□ 0.08
CBWD1-220ENST00000612045 PROSER3Q2NL68 480 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms