RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	GDF11	O95390	407 aa		8.8	□□□□□ -1
LAMA4-222	ENST00000604740	MCM6	Q14566	821 aa		8.8	□□□□□ -1
LAMA4-222	ENST00000604740	WASHC4	Q2M389	1173 aa		8.8	□□□□□ -1
LAMA4-222	ENST00000604740	KCTD17	Q8N5Z5	321 aa		8.8	□□□□□ -1
LAMA4-222	ENST00000604740	FHDC1	Q9C0D6	1143 aa	Predicted RBP	8.8	□□□□□ -1
LAMA4-222	ENST00000604740	HRH3	Q9Y5N1	445 aa		8.8	□□□□□ -1
LAMA4-222	ENST00000604740	PRKCSH	P14314	528 aa	Predicted RBP	8.79	□□□□□ -1
LAMA4-222	ENST00000604740	SIRT1	Q96EB6	747 aa		8.79	□□□□□ -1
LAMA4-222	ENST00000604740	ETNK1	Q9HBU6	452 aa		8.79	□□□□□ -1
LAMA4-222	ENST00000604740		A0A1B0GTH6	734 aa		8.78	□□□□□ -1
LAMA4-222	ENST00000604740	MX2	P20592	715 aa		8.78	□□□□□ -1
LAMA4-222	ENST00000604740	IRS1	P35568	1242 aa		8.78	□□□□□ -1
LAMA4-222	ENST00000604740	SEMA3F	Q13275	785 aa		8.78	□□□□□ -1
LAMA4-222	ENST00000604740	TLR1	Q15399	786 aa		8.78	□□□□□ -1
LAMA4-222	ENST00000604740	C4orf17	Q53FE4	359 aa		8.78	□□□□□ -1
LAMA4-222	ENST00000604740	ENAM	Q9NRM1	1142 aa		8.78	□□□□□ -1
LAMA4-222	ENST00000604740	PLPP7	Q8NBV4	271 aa		8.77	□□□□□ -1.01
LAMA4-222	ENST00000604740	SCARF2	Q96GP6	870 aa	Predicted RBP	8.77	□□□□□ -1.01
LAMA4-222	ENST00000604740	THBS1	P07996	1170 aa		8.76	□□□□□ -1.01
LAMA4-222	ENST00000604740	RHBDD1	Q8TEB9	315 aa		8.76	□□□□□ -1.01
LAMA4-222	ENST00000604740	CHIC2	Q9UKJ5	165 aa		8.76	□□□□□ -1.01
LAMA4-222	ENST00000604740	NSFL1C	Q9UNZ2	370 aa	Known RBP	8.76	□□□□□ -1.01
LAMA4-222	ENST00000604740	CSB-PGBD3	P0DP91	1061 aa		8.75	□□□□□ -1.01
LAMA4-222	ENST00000604740	MAP7D1	Q3KQU3	841 aa		8.75	□□□□□ -1.01
LAMA4-222	ENST00000604740	PGBD3	Q8N328	593 aa		8.75	□□□□□ -1.01
LAMA4-222	ENST00000604740	ACD	Q96AP0	544 aa		8.75	□□□□□ -1.01
LAMA4-222	ENST00000604740	RUBCNL	Q9H714	662 aa		8.75	□□□□□ -1.01
LAMA4-222	ENST00000604740	BCR	P11274	1271 aa		8.74	□□□□□ -1.01
LAMA4-222	ENST00000604740	SOX11	P35716	441 aa		8.74	□□□□□ -1.01
LAMA4-222	ENST00000604740	GDF10	P55107	478 aa		8.74	□□□□□ -1.01
LAMA4-222	ENST00000604740	NEDD1	Q8NHV4	660 aa		8.74	□□□□□ -1.01
LAMA4-222	ENST00000604740	MSX1	P28360	303 aa		8.73	□□□□□ -1.01
LAMA4-222	ENST00000604740	PLA2G4A	P47712	749 aa		8.73	□□□□□ -1.01
LAMA4-222	ENST00000604740	SCNN1D	P51172	638 aa		8.73	□□□□□ -1.01
LAMA4-222	ENST00000604740	KANK3	Q6NY19	840 aa		8.73	□□□□□ -1.01
LAMA4-222	ENST00000604740	PPARGC1B	Q86YN6	1023 aa	Known RBP	8.73	□□□□□ -1.01
LAMA4-222	ENST00000604740	PHF24	Q9UPV7	400 aa		8.73	□□□□□ -1.01
LAMA4-222	ENST00000604740	COG6	Q9Y2V7	657 aa		8.73	□□□□□ -1.01
LAMA4-222	ENST00000604740	INHA	P05111	366 aa		8.72	□□□□□ -1.01
LAMA4-222	ENST00000604740	LBR	Q14739	615 aa	Known RBP	8.72	□□□□□ -1.01
LAMA4-222	ENST00000604740	EFHC2	Q5JST6	749 aa		8.72	□□□□□ -1.01
LAMA4-222	ENST00000604740	CFHR5	Q9BXR6	569 aa		8.72	□□□□□ -1.01
LAMA4-222	ENST00000604740	PIK3CD	O00329	1044 aa		8.71	□□□□□ -1.02
LAMA4-222	ENST00000604740	MAP2K3	P46734	347 aa		8.71	□□□□□ -1.02
LAMA4-222	ENST00000604740	TBC1D9	Q6ZT07	1266 aa		8.71	□□□□□ -1.02
LAMA4-222	ENST00000604740	OXCT2	Q9BYC2	517 aa	Predicted RBP	8.71	□□□□□ -1.02
LAMA4-222	ENST00000604740	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	8.71	□□□□□ -1.02
LAMA4-222	ENST00000604740	PODN	Q7Z5L7	613 aa		8.7	□□□□□ -1.02
LAMA4-222	ENST00000604740	SERTAD1	Q9UHV2	236 aa		8.7	□□□□□ -1.02
LAMA4-222	ENST00000604740	UBAP2L	Q14157	1087 aa	Known RBP	8.69	□□□□□ -1.02
LAMA4-222	ENST00000604740	WWC1	Q8IX03	1113 aa		8.69	□□□□□ -1.02
LAMA4-222	ENST00000604740	CNTNAP5	Q8WYK1	1306 aa		8.69	□□□□□ -1.02
LAMA4-222	ENST00000604740	PHF20L1	A8MW92	1017 aa		8.68	□□□□□ -1.02
LAMA4-222	ENST00000604740	SKI	P12755	728 aa		8.68	□□□□□ -1.02
LAMA4-222	ENST00000604740	SMTN	P53814	917 aa		8.68	□□□□□ -1.02
LAMA4-222	ENST00000604740	GPAT2	Q6NUI2	795 aa		8.68	□□□□□ -1.02
LAMA4-222	ENST00000604740	AIDA	Q96BJ3	306 aa		8.68	□□□□□ -1.02
LAMA4-222	ENST00000604740	ABHD17A	Q96GS6	310 aa		8.68	□□□□□ -1.02
LAMA4-222	ENST00000604740	POM121	Q96HA1	1249 aa		8.68	□□□□□ -1.02
LAMA4-222	ENST00000604740	NIFK	Q9BYG3	293 aa	Known RBP	8.68	□□□□□ -1.02
LAMA4-222	ENST00000604740	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	8.68	□□□□□ -1.02
LAMA4-222	ENST00000604740	OIP5	O43482	229 aa		8.67	□□□□□ -1.02
LAMA4-222	ENST00000604740	EML3	Q32P44	896 aa		8.67	□□□□□ -1.02
LAMA4-222	ENST00000604740	KLRG1	Q96E93	195 aa		8.67	□□□□□ -1.02
LAMA4-222	ENST00000604740	CRISPLD1	Q9H336	500 aa		8.67	□□□□□ -1.02
LAMA4-222	ENST00000604740	LRRC4B	Q9NT99	713 aa		8.67	□□□□□ -1.02
LAMA4-222	ENST00000604740	TMEM229A	B2RXF0	380 aa		8.66	□□□□□ -1.02
LAMA4-222	ENST00000604740	BMP4	P12644	408 aa		8.66	□□□□□ -1.02
LAMA4-222	ENST00000604740	FGFR3	P22607	806 aa		8.66	□□□□□ -1.02
LAMA4-222	ENST00000604740	BEND7	Q8N7W2	519 aa	Predicted RBP	8.66	□□□□□ -1.02
LAMA4-222	ENST00000604740	RAD21	O60216	631 aa		8.65	□□□□□ -1.02
LAMA4-222	ENST00000604740	BNIP3L	O60238	219 aa		8.65	□□□□□ -1.02
LAMA4-222	ENST00000604740	ATP4A	P20648	1035 aa		8.65	□□□□□ -1.02
LAMA4-222	ENST00000604740	PSME1	Q06323	249 aa		8.65	□□□□□ -1.02
LAMA4-222	ENST00000604740	ALG2	Q9H553	416 aa		8.65	□□□□□ -1.02
LAMA4-222	ENST00000604740	GDF2	Q9UK05	429 aa	Predicted RBP	8.65	□□□□□ -1.02
LAMA4-222	ENST00000604740		A6NJY4	79 aa		8.64	□□□□□ -1.03
LAMA4-222	ENST00000604740	NBPF1	Q3BBV0	1214 aa		8.64	□□□□□ -1.03
LAMA4-222	ENST00000604740	FIGNL1	Q6PIW4	674 aa		8.64	□□□□□ -1.03
LAMA4-222	ENST00000604740	GALNT6	Q8NCL4	622 aa		8.64	□□□□□ -1.03
LAMA4-222	ENST00000604740	C1orf216	Q8TAB5	229 aa		8.64	□□□□□ -1.03
LAMA4-222	ENST00000604740	NDFIP2	Q9NV92	336 aa		8.64	□□□□□ -1.03
LAMA4-222	ENST00000604740	CABP1	Q9NZU7	370 aa		8.64	□□□□□ -1.03
LAMA4-222	ENST00000604740	NOD1	Q9Y239	953 aa		8.64	□□□□□ -1.03
LAMA4-222	ENST00000604740	PCDHGA11	Q9Y5H2	935 aa		8.64	□□□□□ -1.03
LAMA4-222	ENST00000604740	SHISA8	B8ZZ34	492 aa		8.63	□□□□□ -1.03
LAMA4-222	ENST00000604740	GTF2I	P78347	998 aa		8.63	□□□□□ -1.03
LAMA4-222	ENST00000604740	FOXK2	Q01167	660 aa		8.63	□□□□□ -1.03
LAMA4-222	ENST00000604740	NCOA4	Q13772	614 aa		8.63	□□□□□ -1.03
LAMA4-222	ENST00000604740	ARSJ	Q5FYB0	599 aa	Predicted RBP	8.63	□□□□□ -1.03
LAMA4-222	ENST00000604740	SLC4A9	Q96Q91	983 aa		8.63	□□□□□ -1.03
LAMA4-222	ENST00000604740	DNAAF2	Q9NVR5	837 aa	Known RBP	8.63	□□□□□ -1.03
LAMA4-222	ENST00000604740	USP3	Q9Y6I4	520 aa		8.63	□□□□□ -1.03
LAMA4-222	ENST00000604740	CDK2AP1	O14519	115 aa		8.62	□□□□□ -1.03
LAMA4-222	ENST00000604740	C2CD2L	O14523	706 aa		8.62	□□□□□ -1.03
LAMA4-222	ENST00000604740	UBTF	P17480	764 aa	Known RBP	8.62	□□□□□ -1.03
LAMA4-222	ENST00000604740	TAT	P17735	454 aa	Predicted RBP	8.62	□□□□□ -1.03
LAMA4-222	ENST00000604740	CTBS	Q01459	385 aa		8.62	□□□□□ -1.03
LAMA4-222	ENST00000604740	MTFR1	Q15390	333 aa		8.62	□□□□□ -1.03
LAMA4-222	ENST00000604740	C1orf229	Q6ZS94	237 aa	Predicted RBP	8.62	□□□□□ -1.03

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