RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 TRIM52Q96A61 297 aa6.31□□□□□ -1.4
SGMS1-207ENST00000602619 C2CD2LO14523 706 aa6.3□□□□□ -1.4
SGMS1-207ENST00000602619 DOC2BQ14184 412 aa6.3□□□□□ -1.4
SGMS1-207ENST00000602619 CC2D2BQ6DHV5 1058 aa6.3□□□□□ -1.4
SGMS1-207ENST00000602619 TAS1R3Q7RTX0 852 aa6.3□□□□□ -1.4
SGMS1-207ENST00000602619 GOLGA6L1Q8N7Z2 621 aa6.3□□□□□ -1.4
SGMS1-207ENST00000602619 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.3□□□□□ -1.4
SGMS1-207ENST00000602619 GNB5O14775 395 aa6.29□□□□□ -1.4
SGMS1-207ENST00000602619 AMPD1P23109 780 aa6.29□□□□□ -1.4
SGMS1-207ENST00000602619 SKIV2LQ15477 1246 aaKnown RBP6.29□□□□□ -1.4
SGMS1-207ENST00000602619 ZMYM1Q5SVZ6 1142 aa6.29□□□□□ -1.4
SGMS1-207ENST00000602619 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
SGMS1-207ENST00000602619 PNMA1Q8ND90 353 aa6.29□□□□□ -1.4
SGMS1-207ENST00000602619 BTBD6Q96KE9 485 aa6.29□□□□□ -1.4
SGMS1-207ENST00000602619 KRTAP4-12Q9BQ66 201 aa6.29□□□□□ -1.4
SGMS1-207ENST00000602619 GPAMQ9HCL2 828 aa6.29□□□□□ -1.4
SGMS1-207ENST00000602619 GGA1Q9UJY5 639 aa6.28□□□□□ -1.4
SGMS1-207ENST00000602619 PHF24Q9UPV7 400 aa6.28□□□□□ -1.4
SGMS1-207ENST00000602619 PHKA2P46019 1235 aa6.27□□□□□ -1.41
SGMS1-207ENST00000602619 SCTRP47872 440 aa6.27□□□□□ -1.41
SGMS1-207ENST00000602619 CTBSQ01459 385 aa6.27□□□□□ -1.41
SGMS1-207ENST00000602619 ARHGEF10LQ9HCE6 1279 aa6.27□□□□□ -1.41
SGMS1-207ENST00000602619 BMP4P12644 408 aa6.26□□□□□ -1.41
SGMS1-207ENST00000602619 CYP2U1Q7Z449 544 aa6.26□□□□□ -1.41
SGMS1-207ENST00000602619 IL27Q8NEV9 243 aa6.26□□□□□ -1.41
SGMS1-207ENST00000602619 OSBPL3Q9H4L5 887 aa6.26□□□□□ -1.41
SGMS1-207ENST00000602619 PIK3R2O00459 728 aa6.25□□□□□ -1.41
SGMS1-207ENST00000602619 TRAK2O60296 914 aa6.25□□□□□ -1.41
SGMS1-207ENST00000602619 USP17L8P0C7I0 530 aa6.25□□□□□ -1.41
SGMS1-207ENST00000602619 EPXP11678 715 aa6.25□□□□□ -1.41
SGMS1-207ENST00000602619 DGKGP49619 791 aa6.25□□□□□ -1.41
SGMS1-207ENST00000602619 CENPCQ03188 943 aa6.25□□□□□ -1.41
SGMS1-207ENST00000602619 SLCO4C1Q6ZQN7 724 aa6.25□□□□□ -1.41
SGMS1-207ENST00000602619 RUBCNLQ9H714 662 aa6.25□□□□□ -1.41
SGMS1-207ENST00000602619 PCDHB9Q9Y5E1 797 aa6.25□□□□□ -1.41
SGMS1-207ENST00000602619 A0A1B0GTH6 734 aa6.24□□□□□ -1.41
SGMS1-207ENST00000602619 BNIP3LO60238 219 aa6.24□□□□□ -1.41
SGMS1-207ENST00000602619 FOXD4L6Q3SYB3 417 aaPredicted RBP6.24□□□□□ -1.41
SGMS1-207ENST00000602619 FOXD4L3Q6VB84 417 aaPredicted RBP6.24□□□□□ -1.41
SGMS1-207ENST00000602619 CCDC125Q86Z20 511 aa6.24□□□□□ -1.41
SGMS1-207ENST00000602619 ABHD17AQ96GS6 310 aa6.24□□□□□ -1.41
SGMS1-207ENST00000602619 TRIM34Q9BYJ4 488 aa6.24□□□□□ -1.41
SGMS1-207ENST00000602619 RAB6BQ9NRW1 208 aa6.24□□□□□ -1.41
SGMS1-207ENST00000602619 NDFIP2Q9NV92 336 aa6.24□□□□□ -1.41
SGMS1-207ENST00000602619 ATXN7L1Q9ULK2 861 aaPredicted RBP6.24□□□□□ -1.41
SGMS1-207ENST00000602619 FGFR3P22607 806 aa6.23□□□□□ -1.41
SGMS1-207ENST00000602619 LBRQ14739 615 aaKnown RBP6.23□□□□□ -1.41
SGMS1-207ENST00000602619 CNKSR1Q969H4 720 aa6.23□□□□□ -1.41
SGMS1-207ENST00000602619 ESYT1Q9BSJ8 1104 aa6.23□□□□□ -1.41
SGMS1-207ENST00000602619 NOP53Q9NZM5 478 aaKnown RBP6.23□□□□□ -1.41
SGMS1-207ENST00000602619 ATP1B4Q9UN42 357 aaPredicted RBP6.23□□□□□ -1.41
SGMS1-207ENST00000602619 HRH3Q9Y5N1 445 aa6.23□□□□□ -1.41
SGMS1-207ENST00000602619 ZBBXA8MT70 800 aa6.22□□□□□ -1.41
SGMS1-207ENST00000602619 IL2RAP01589 272 aa6.22□□□□□ -1.41
SGMS1-207ENST00000602619 MSX1P28360 303 aa6.22□□□□□ -1.41
SGMS1-207ENST00000602619 GATA4P43694 442 aa6.22□□□□□ -1.41
SGMS1-207ENST00000602619 RNF20Q5VTR2 975 aa6.22□□□□□ -1.41
SGMS1-207ENST00000602619 RNF135Q8IUD6 432 aa6.22□□□□□ -1.41
SGMS1-207ENST00000602619 NEURL1BA8MQ27 555 aa6.21□□□□□ -1.42
SGMS1-207ENST00000602619 FBXO45P0C2W1 286 aa6.21□□□□□ -1.42
SGMS1-207ENST00000602619 CSB-PGBD3P0DP91 1061 aa6.21□□□□□ -1.42
SGMS1-207ENST00000602619 RSPO4Q2I0M5 234 aaPredicted RBP6.21□□□□□ -1.42
SGMS1-207ENST00000602619 PGBD3Q8N328 593 aa6.21□□□□□ -1.42
SGMS1-207ENST00000602619 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
SGMS1-207ENST00000602619 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
SGMS1-207ENST00000602619 PCDHB11Q9Y5F2 797 aa6.21□□□□□ -1.42
SGMS1-207ENST00000602619 GNRH1P01148 92 aa6.2□□□□□ -1.42
SGMS1-207ENST00000602619 ARAFP10398 606 aa6.2□□□□□ -1.42
SGMS1-207ENST00000602619 C4orf17Q53FE4 359 aa6.2□□□□□ -1.42
SGMS1-207ENST00000602619 NKAPLQ5M9Q1 402 aa6.2□□□□□ -1.42
SGMS1-207ENST00000602619 CHSY3Q70JA7 882 aa6.2□□□□□ -1.42
SGMS1-207ENST00000602619 ZSCAN10Q96SZ4 725 aaPredicted RBP6.2□□□□□ -1.42
SGMS1-207ENST00000602619 KLF15Q9UIH9 416 aa6.2□□□□□ -1.42
SGMS1-207ENST00000602619 SCO2A0A1W2PP80 73 aa6.19□□□□□ -1.42
SGMS1-207ENST00000602619 EFHC2Q5JST6 749 aa6.19□□□□□ -1.42
SGMS1-207ENST00000602619 TRIM11Q96F44 468 aa6.19□□□□□ -1.42
SGMS1-207ENST00000602619 XAGE2Q96GT9 111 aa6.19□□□□□ -1.42
SGMS1-207ENST00000602619 PCMTD1Q96MG8 357 aaPredicted RBP6.19□□□□□ -1.42
SGMS1-207ENST00000602619 FHDC1Q9C0D6 1143 aaPredicted RBP6.19□□□□□ -1.42
SGMS1-207ENST00000602619 PLVAPQ9BX97 442 aa6.18□□□□□ -1.42
SGMS1-207ENST00000602619 ESF1Q9H501 851 aaKnown RBP6.18□□□□□ -1.42
SGMS1-207ENST00000602619 HCN2Q9UL51 889 aa6.18□□□□□ -1.42
SGMS1-207ENST00000602619 SOCS7O14512 581 aa6.17□□□□□ -1.42
SGMS1-207ENST00000602619 RFC5P40937 340 aa6.17□□□□□ -1.42
SGMS1-207ENST00000602619 GNASQ5JWF2 1037 aa6.17□□□□□ -1.42
SGMS1-207ENST00000602619 ARTNQ5T4W7 220 aa6.17□□□□□ -1.42
SGMS1-207ENST00000602619 TMEM214Q6NUQ4 689 aaKnown RBP6.17□□□□□ -1.42
SGMS1-207ENST00000602619 CRISPLD1Q9H336 500 aa6.17□□□□□ -1.42
SGMS1-207ENST00000602619 ZFP64Q9NPA5 681 aa6.17□□□□□ -1.42
SGMS1-207ENST00000602619 FCHSD1Q86WN1 690 aa6.16□□□□□ -1.42
SGMS1-207ENST00000602619 ZCCHC2Q9C0B9 1178 aaKnown RBP6.16□□□□□ -1.42
SGMS1-207ENST00000602619 TPSG1Q9NRR2 321 aa6.16□□□□□ -1.42
SGMS1-207ENST00000602619 DNAAF2Q9NVR5 837 aaKnown RBP6.16□□□□□ -1.42
SGMS1-207ENST00000602619 SPATA31C1P0DKV0 1188 aa6.15□□□□□ -1.42
SGMS1-207ENST00000602619 MCCD1P59942 119 aaPredicted RBP6.15□□□□□ -1.42
SGMS1-207ENST00000602619 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
SGMS1-207ENST00000602619 GJD4Q96KN9 370 aaPredicted RBP6.15□□□□□ -1.42
SGMS1-207ENST00000602619 CDCA7Q9BWT1 371 aaPredicted RBP6.15□□□□□ -1.42
SGMS1-207ENST00000602619 PCDHGC4Q9Y5F7 938 aa6.15□□□□□ -1.42
SGMS1-207ENST00000602619 ADH6P28332 368 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms