RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 GPSM3Q9Y4H4 160 aa11.77□□□□□ -0.53
LINC00343-207ENST00000599179 C9orf84Q5VXU9 1444 aa11.77□□□□□ -0.53
LINC00343-207ENST00000599179 SCAPERQ9BY12 1400 aa11.76□□□□□ -0.53
LINC00343-207ENST00000599179 PLEKHD1A6NEE1 506 aa11.75□□□□□ -0.53
LINC00343-207ENST00000599179 PTK2Q05397 1052 aa11.75□□□□□ -0.53
LINC00343-207ENST00000599179 PPP2R2DQ66LE6 453 aa11.75□□□□□ -0.53
LINC00343-207ENST00000599179 LRRN4Q8WUT4 740 aa11.75□□□□□ -0.53
LINC00343-207ENST00000599179 NCOA1Q15788 1441 aa11.75□□□□□ -0.53
LINC00343-207ENST00000599179 CFAP74Q9C0B2 1584 aa11.75□□□□□ -0.53
LINC00343-207ENST00000599179 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
LINC00343-207ENST00000599179 SPINT1O43278 529 aa11.74□□□□□ -0.53
LINC00343-207ENST00000599179 ZNF335Q9H4Z2 1342 aaPredicted RBP11.74□□□□□ -0.53
LINC00343-207ENST00000599179 PRXQ9BXM0 1461 aa11.74□□□□□ -0.53
LINC00343-207ENST00000599179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00343-207ENST00000599179 MED1Q15648 1581 aaPredicted RBP11.73□□□□□ -0.53
LINC00343-207ENST00000599179 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00343-207ENST00000599179 HSPA1LP34931 641 aa11.72□□□□□ -0.53
LINC00343-207ENST00000599179 NR6A1Q15406 480 aa11.72□□□□□ -0.53
LINC00343-207ENST00000599179 NBPF20Q3BBV1 942 aa11.72□□□□□ -0.53
LINC00343-207ENST00000599179 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
LINC00343-207ENST00000599179 PTSQ03393 145 aa11.71□□□□□ -0.53
LINC00343-207ENST00000599179 CBLBQ13191 982 aa11.71□□□□□ -0.53
LINC00343-207ENST00000599179 KDM4CQ9H3R0 1056 aa11.71□□□□□ -0.53
LINC00343-207ENST00000599179 TRAPPC8Q9Y2L5 1435 aa11.69□□□□□ -0.54
LINC00343-207ENST00000599179 INTS6LQ5JSJ4 861 aaKnown RBP11.69□□□□□ -0.54
LINC00343-207ENST00000599179 SAMD9Q5K651 1589 aa11.68□□□□□ -0.54
LINC00343-207ENST00000599179 NANOS1Q8WY41 292 aaKnown RBP11.68□□□□□ -0.54
LINC00343-207ENST00000599179 TRIM52Q96A61 297 aa11.68□□□□□ -0.54
LINC00343-207ENST00000599179 PLCH2O75038 1416 aa11.68□□□□□ -0.54
LINC00343-207ENST00000599179 AP1G2O75843 785 aa11.67□□□□□ -0.54
LINC00343-207ENST00000599179 PIP4K2BP78356 416 aa11.67□□□□□ -0.54
LINC00343-207ENST00000599179 ADAM32Q8TC27 787 aa11.67□□□□□ -0.54
LINC00343-207ENST00000599179 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
LINC00343-207ENST00000599179 FIGNL2A6NMB9 653 aa11.66□□□□□ -0.54
LINC00343-207ENST00000599179 RANGAP1P46060 587 aaPredicted RBP11.66□□□□□ -0.54
LINC00343-207ENST00000599179 AFAP1Q8N556 730 aa11.66□□□□□ -0.54
LINC00343-207ENST00000599179 CCDC155Q8N6L0 562 aa11.66□□□□□ -0.54
LINC00343-207ENST00000599179 PROCA1Q8NCQ7 364 aaPredicted RBP11.66□□□□□ -0.54
LINC00343-207ENST00000599179 ESF1Q9H501 851 aaKnown RBP11.66□□□□□ -0.54
LINC00343-207ENST00000599179 CAMSAP1Q5T5Y3 1602 aa11.65□□□□□ -0.54
LINC00343-207ENST00000599179 EFCAB2Q5VUJ9 269 aa11.64□□□□□ -0.55
LINC00343-207ENST00000599179 OCSTAMPQ9BR26 566 aa11.64□□□□□ -0.55
LINC00343-207ENST00000599179 FAM117AQ9C073 453 aa11.64□□□□□ -0.55
LINC00343-207ENST00000599179 GPBP1L1Q9HC44 474 aaPredicted RBP11.64□□□□□ -0.55
LINC00343-207ENST00000599179 C3P01024 1663 aa11.64□□□□□ -0.55
LINC00343-207ENST00000599179 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
LINC00343-207ENST00000599179 SLC35F4A4IF30 521 aa11.63□□□□□ -0.55
LINC00343-207ENST00000599179 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
LINC00343-207ENST00000599179 RNF225M0QZC1 329 aaPredicted RBP11.62□□□□□ -0.55
LINC00343-207ENST00000599179 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
LINC00343-207ENST00000599179 RELBQ01201 579 aa11.62□□□□□ -0.55
LINC00343-207ENST00000599179 KCNMA1Q12791 1236 aa11.62□□□□□ -0.55
LINC00343-207ENST00000599179 CNTNAP3BQ96NU0 1288 aa11.62□□□□□ -0.55
LINC00343-207ENST00000599179 CNTNAP3Q9BZ76 1288 aa11.62□□□□□ -0.55
LINC00343-207ENST00000599179 POLMQ9NP87 494 aaPredicted RBP11.62□□□□□ -0.55
LINC00343-207ENST00000599179 DIP2CQ9Y2E4 1556 aa11.62□□□□□ -0.55
LINC00343-207ENST00000599179 ITGA6P23229 1130 aa11.61□□□□□ -0.55
LINC00343-207ENST00000599179 KRT76Q01546 638 aa11.61□□□□□ -0.55
LINC00343-207ENST00000599179 DZIP3Q86Y13 1208 aaKnown RBP11.61□□□□□ -0.55
LINC00343-207ENST00000599179 GPR161Q8N6U8 529 aaKnown RBP11.61□□□□□ -0.55
LINC00343-207ENST00000599179 AGBL1Q96MI9 1066 aa11.61□□□□□ -0.55
LINC00343-207ENST00000599179 CDK13Q14004 1512 aaKnown RBP11.6□□□□□ -0.55
LINC00343-207ENST00000599179 KDM5CP41229 1560 aa11.6□□□□□ -0.55
LINC00343-207ENST00000599179 ADH1AP07327 375 aa11.6□□□□□ -0.55
LINC00343-207ENST00000599179 CTSOP43234 321 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-207ENST00000599179 INSM2Q96T92 566 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-207ENST00000599179 COL25A1Q9BXS0 654 aaPredicted RBP11.6□□□□□ -0.55
LINC00343-207ENST00000599179 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
LINC00343-207ENST00000599179 TOM1O60784 492 aa11.59□□□□□ -0.55
LINC00343-207ENST00000599179 SEPT12Q8IYM1 358 aa11.59□□□□□ -0.55
LINC00343-207ENST00000599179 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
LINC00343-207ENST00000599179 NPATQ14207 1427 aa11.59□□□□□ -0.55
LINC00343-207ENST00000599179 REREQ9P2R6 1566 aa11.58□□□□□ -0.55
LINC00343-207ENST00000599179 SV2AQ7L0J3 742 aa11.58□□□□□ -0.56
LINC00343-207ENST00000599179 RNF217Q8TC41 542 aa11.58□□□□□ -0.56
LINC00343-207ENST00000599179 AGLP35573 1532 aa11.58□□□□□ -0.56
LINC00343-207ENST00000599179 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
LINC00343-207ENST00000599179 TCOF1Q13428 1488 aaKnown RBP11.57□□□□□ -0.56
LINC00343-207ENST00000599179 EPS8L1Q8TE68 723 aa11.57□□□□□ -0.56
LINC00343-207ENST00000599179 HMX1Q9NP08 348 aaPredicted RBP11.57□□□□□ -0.56
LINC00343-207ENST00000599179 ABCA6Q8N139 1617 aa11.57□□□□□ -0.56
LINC00343-207ENST00000599179 RFC5P40937 340 aa11.56□□□□□ -0.56
LINC00343-207ENST00000599179 GOPCQ9HD26 462 aa11.56□□□□□ -0.56
LINC00343-207ENST00000599179 TMPRSS4Q9NRS4 437 aa11.56□□□□□ -0.56
LINC00343-207ENST00000599179 MLH3Q9UHC1 1453 aa11.56□□□□□ -0.56
LINC00343-207ENST00000599179 ZMYM3Q14202 1370 aa11.55□□□□□ -0.56
LINC00343-207ENST00000599179 CDC14CA4D256 554 aa11.55□□□□□ -0.56
LINC00343-207ENST00000599179 ESPNB1AK53 854 aa11.55□□□□□ -0.56
LINC00343-207ENST00000599179 ERVH48-1M5A8F1 160 aa11.55□□□□□ -0.56
LINC00343-207ENST00000599179 RAB15P59190 212 aa11.55□□□□□ -0.56
LINC00343-207ENST00000599179 ZNF395Q9H8N7 513 aaPredicted RBP11.55□□□□□ -0.56
LINC00343-207ENST00000599179 ARHGAP5Q13017 1502 aa11.55□□□□□ -0.56
LINC00343-207ENST00000599179 PTGIRP43119 386 aa11.54□□□□□ -0.56
LINC00343-207ENST00000599179 CCDC125Q86Z20 511 aa11.54□□□□□ -0.56
LINC00343-207ENST00000599179 RGS17Q9UGC6 210 aaPredicted RBP11.54□□□□□ -0.56
LINC00343-207ENST00000599179 LILRA1O75019 489 aa11.53□□□□□ -0.56
LINC00343-207ENST00000599179 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
LINC00343-207ENST00000599179 TMEM259Q4ZIN3 620 aa11.53□□□□□ -0.56
LINC00343-207ENST00000599179 VWA5B2Q8N398 1253 aa11.53□□□□□ -0.56
LINC00343-207ENST00000599179 SVOPQ8N4V2 548 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms