RNA–Protein interactions for RNA: ENST00000593044.5

TMC6-224, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 3,070 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-224ENST00000593044 PTPRCP08575 1304 aa20.18■□□□□ 0.82
TMC6-224ENST00000593044 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
TMC6-224ENST00000593044 TEFQ10587 303 aa20.18■□□□□ 0.82
TMC6-224ENST00000593044 MED1Q15648 1581 aaPredicted RBP20.18■□□□□ 0.82
TMC6-224ENST00000593044 RGS12O14924 1447 aa20.18■□□□□ 0.82
TMC6-224ENST00000593044 AKAP4Q5JQC9 854 aa20.18■□□□□ 0.82
TMC6-224ENST00000593044 ERBB3P21860 1342 aa20.17■□□□□ 0.82
TMC6-224ENST00000593044 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
TMC6-224ENST00000593044 ANKRD45Q5TZF3 282 aa20.17■□□□□ 0.82
TMC6-224ENST00000593044 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
TMC6-224ENST00000593044 NCOA3Q9Y6Q9 1424 aa20.17■□□□□ 0.82
TMC6-224ENST00000593044 KCNQ3O43525 872 aa20.17■□□□□ 0.82
TMC6-224ENST00000593044 EIF2S2P20042 333 aaKnown RBP20.17■□□□□ 0.82
TMC6-224ENST00000593044 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
TMC6-224ENST00000593044 BRINP3Q76B58 766 aa20.16■□□□□ 0.82
TMC6-224ENST00000593044 ALS2Q96Q42 1657 aa20.16■□□□□ 0.82
TMC6-224ENST00000593044 AMOTQ4VCS5 1084 aa20.16■□□□□ 0.82
TMC6-224ENST00000593044 FKBP5Q13451 457 aaPredicted RBP20.16■□□□□ 0.82
TMC6-224ENST00000593044 LRRC37A3O60309 1634 aa20.15■□□□□ 0.82
TMC6-224ENST00000593044 NUCB1Q02818 461 aa20.15■□□□□ 0.82
TMC6-224ENST00000593044 MEIS3Q99687 375 aa20.15■□□□□ 0.82
TMC6-224ENST00000593044 STRCQ7RTU9 1775 aa20.15■□□□□ 0.82
TMC6-224ENST00000593044 CEMIPQ8WUJ3 1361 aa20.15■□□□□ 0.82
TMC6-224ENST00000593044 BTBD11A6QL63 1104 aa20.14■□□□□ 0.82
TMC6-224ENST00000593044 CHD1LQ86WJ1 897 aa20.14■□□□□ 0.82
TMC6-224ENST00000593044 FLIIQ13045 1269 aa20.14■□□□□ 0.81
TMC6-224ENST00000593044 HDGFL1Q5TGJ6 251 aa20.14■□□□□ 0.81
TMC6-224ENST00000593044 SPATA31A3Q5VYP0 1347 aa20.14■□□□□ 0.81
TMC6-224ENST00000593044 PXDNQ92626 1479 aa20.14■□□□□ 0.81
TMC6-224ENST00000593044 SLAIN2Q9P270 581 aa20.13■□□□□ 0.81
TMC6-224ENST00000593044 XIRP1Q702N8 1843 aaKnown RBP20.13■□□□□ 0.81
TMC6-224ENST00000593044 RNMTO43148 476 aaKnown RBP20.13■□□□□ 0.81
TMC6-224ENST00000593044 RAPGEF4Q8WZA2 1011 aa20.13■□□□□ 0.81
TMC6-224ENST00000593044 TNS3Q68CZ2 1445 aa20.13■□□□□ 0.81
TMC6-224ENST00000593044 C22orf23Q9BZE7 217 aa20.12■□□□□ 0.81
TMC6-224ENST00000593044 BABAM1Q9NWV8 329 aa20.12■□□□□ 0.81
TMC6-224ENST00000593044 GLIPR1L2Q4G1C9 344 aa20.12■□□□□ 0.81
TMC6-224ENST00000593044 GCC1Q96CN9 775 aa20.12■□□□□ 0.81
TMC6-224ENST00000593044 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
TMC6-224ENST00000593044 PHAXQ9H814 394 aaKnown RBP20.11■□□□□ 0.81
TMC6-224ENST00000593044 GZF1Q9H116 711 aaPredicted RBP20.1■□□□□ 0.81
TMC6-224ENST00000593044 APBB1O00213 710 aa20.09■□□□□ 0.81
TMC6-224ENST00000593044 ANXA1P04083 346 aa20.08■□□□□ 0.81
TMC6-224ENST00000593044 PODXL2Q9NZ53 605 aa20.08■□□□□ 0.81
TMC6-224ENST00000593044 CCT4P50991 539 aaKnown RBP20.08■□□□□ 0.8
TMC6-224ENST00000593044 CEP85Q6P2H3 762 aa20.07■□□□□ 0.8
TMC6-224ENST00000593044 TATP17735 454 aaPredicted RBP20.07■□□□□ 0.8
TMC6-224ENST00000593044 ANKRD44Q8N8A2 993 aa20.07■□□□□ 0.8
TMC6-224ENST00000593044 NCAPD2Q15021 1401 aa20.07■□□□□ 0.8
TMC6-224ENST00000593044 CHPF2Q9P2E5 772 aa20.06■□□□□ 0.8
TMC6-224ENST00000593044 RPAP2Q8IXW5 612 aaPredicted RBP20.05■□□□□ 0.8
TMC6-224ENST00000593044 LMO7Q8WWI1 1683 aa20.05■□□□□ 0.8
TMC6-224ENST00000593044 PRAMEF22A3QJZ6 481 aa20.04■□□□□ 0.8
TMC6-224ENST00000593044 PRDM11Q9NQV5 511 aa20.04■□□□□ 0.8
TMC6-224ENST00000593044 DCTPP1Q9H773 170 aa20.04■□□□□ 0.8
TMC6-224ENST00000593044 ATP10DQ9P241 1426 aa20.04■□□□□ 0.8
TMC6-224ENST00000593044 FAM208AQ9UK61 1670 aaKnown RBP20.04■□□□□ 0.8
TMC6-224ENST00000593044 SOS1Q07889 1333 aaPredicted RBP20.03■□□□□ 0.8
TMC6-224ENST00000593044 SLC39A6Q13433 755 aa20.03■□□□□ 0.8
TMC6-224ENST00000593044 SPG7Q9UQ90 795 aa20.02■□□□□ 0.8
TMC6-224ENST00000593044 MCM4P33991 863 aa20.02■□□□□ 0.8
TMC6-224ENST00000593044 C16orf71Q8IYS4 520 aaPredicted RBP20.02■□□□□ 0.8
TMC6-224ENST00000593044 SMARCA5O60264 1052 aaPredicted RBP20.01■□□□□ 0.79
TMC6-224ENST00000593044 VSIG10Q8N0Z9 540 aa20.01■□□□□ 0.79
TMC6-224ENST00000593044 MEGF6O75095 1541 aa20.01■□□□□ 0.79
TMC6-224ENST00000593044 COL18A1P39060 1754 aa20.01■□□□□ 0.79
TMC6-224ENST00000593044 NFATC2IPQ8NCF5 419 aa20.01■□□□□ 0.79
TMC6-224ENST00000593044 GNAI2P04899 355 aa20.01■□□□□ 0.79
TMC6-224ENST00000593044 PHKG2P15735 406 aa20.01■□□□□ 0.79
TMC6-224ENST00000593044 CACNA1FO60840 1977 aa20■□□□□ 0.79
TMC6-224ENST00000593044 SOS2Q07890 1332 aaPredicted RBP20■□□□□ 0.79
TMC6-224ENST00000593044 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
TMC6-224ENST00000593044 GIGYF1O75420 1035 aaPredicted RBP20■□□□□ 0.79
TMC6-224ENST00000593044 KDM3BQ7LBC6 1761 aa20■□□□□ 0.79
TMC6-224ENST00000593044 PI4KAP2A4QPH2 592 aa19.99■□□□□ 0.79
TMC6-224ENST00000593044 TOM1L2Q6ZVM7 507 aa19.99■□□□□ 0.79
TMC6-224ENST00000593044 IFNL2Q8IZJ0 200 aa19.99■□□□□ 0.79
TMC6-224ENST00000593044 PI4KAP1Q8N8J0 262 aa19.99■□□□□ 0.79
TMC6-224ENST00000593044 HOXB7P09629 217 aa19.98■□□□□ 0.79
TMC6-224ENST00000593044 HSCBQ8IWL3 235 aa19.98■□□□□ 0.79
TMC6-224ENST00000593044 PANK2Q9BZ23 570 aa19.98■□□□□ 0.79
TMC6-224ENST00000593044 ZMYND15Q9H091 742 aa19.98■□□□□ 0.79
TMC6-224ENST00000593044 CYP27B1O15528 508 aa19.98■□□□□ 0.79
TMC6-224ENST00000593044 PROSER3Q2NL68 480 aa19.98■□□□□ 0.79
TMC6-224ENST00000593044 CHMP5Q9NZZ3 219 aa19.98■□□□□ 0.79
TMC6-224ENST00000593044 GNAI3P08754 354 aa19.97■□□□□ 0.79
TMC6-224ENST00000593044 FAM43AQ8N2R8 423 aa19.97■□□□□ 0.79
TMC6-224ENST00000593044 OTUD7AQ8TE49 926 aaPredicted RBP19.97■□□□□ 0.79
TMC6-224ENST00000593044 STRN4Q9NRL3 753 aa19.97■□□□□ 0.79
TMC6-224ENST00000593044 HMMRO75330 724 aa19.97■□□□□ 0.79
TMC6-224ENST00000593044 USP44Q9H0E7 712 aa19.97■□□□□ 0.79
TMC6-224ENST00000593044 SLC52A2Q9HAB3 445 aa19.97■□□□□ 0.79
TMC6-224ENST00000593044 LRRFIP2Q9Y608 721 aaKnown RBP19.97■□□□□ 0.79
TMC6-224ENST00000593044 CPDO75976 1380 aa19.97■□□□□ 0.79
TMC6-224ENST00000593044 DBF4Q9UBU7 674 aaPredicted RBP19.96■□□□□ 0.79
TMC6-224ENST00000593044 XRCC6P12956 609 aaKnown RBP eCLIP19.96■□□□□ 0.791e-6■■□□□ 12.5
TMC6-224ENST00000593044 ZNF790Q6PG37 636 aa19.96■□□□□ 0.79
TMC6-224ENST00000593044 SRCIN1Q9C0H9 1055 aa19.96■□□□□ 0.79
TMC6-224ENST00000593044 RRAGDQ9NQL2 400 aaPredicted RBP19.96■□□□□ 0.79
TMC6-224ENST00000593044 EXOC6BQ9Y2D4 811 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms