RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 POLKQ9UBT6 870 aa12.68□□□□□ -0.38
APOC1-207ENST00000592176 ERVV-2B6SEH9 535 aa12.67□□□□□ -0.38
APOC1-207ENST00000592176 APLP1P51693 650 aa12.67□□□□□ -0.38
APOC1-207ENST00000592176 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
APOC1-207ENST00000592176 ARHGEF1Q92888 912 aaKnown RBP12.67□□□□□ -0.38
APOC1-207ENST00000592176 TOMM70O94826 608 aa12.66□□□□□ -0.38
APOC1-207ENST00000592176 FCHSD2O94868 740 aa12.66□□□□□ -0.38
APOC1-207ENST00000592176 RFC4P35249 363 aa12.66□□□□□ -0.38
APOC1-207ENST00000592176 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
APOC1-207ENST00000592176 PARP3Q9Y6F1 533 aa12.66□□□□□ -0.38
APOC1-207ENST00000592176 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
APOC1-207ENST00000592176 RPS6KA4O75676 772 aa12.65□□□□□ -0.38
APOC1-207ENST00000592176 HSP90AB1P08238 724 aaKnown RBP12.65□□□□□ -0.38
APOC1-207ENST00000592176 DPEP1P16444 411 aa12.65□□□□□ -0.38
APOC1-207ENST00000592176 ADRA2BP18089 450 aa12.65□□□□□ -0.38
APOC1-207ENST00000592176 TNNT2P45379 298 aaPredicted RBP12.65□□□□□ -0.38
APOC1-207ENST00000592176 EIF4A2Q14240 407 aaKnown RBP12.65□□□□□ -0.38
APOC1-207ENST00000592176 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
APOC1-207ENST00000592176 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.39
APOC1-207ENST00000592176 GYS1P13807 737 aa12.64□□□□□ -0.39
APOC1-207ENST00000592176 CABP4P57796 275 aa12.64□□□□□ -0.39
APOC1-207ENST00000592176 PLEKHO1Q53GL0 409 aaPredicted RBP12.64□□□□□ -0.39
APOC1-207ENST00000592176 DCAF5Q96JK2 942 aa12.64□□□□□ -0.39
APOC1-207ENST00000592176 DNAJC5GQ8N7S2 189 aa12.63□□□□□ -0.39
APOC1-207ENST00000592176 POLR3GLQ9BT43 218 aa12.63□□□□□ -0.39
APOC1-207ENST00000592176 ITGB4P16144 1822 aa12.62□□□□□ -0.39
APOC1-207ENST00000592176 NMRK2Q9NPI5 230 aa12.62□□□□□ -0.39
APOC1-207ENST00000592176 PIM2Q9P1W9 311 aa12.62□□□□□ -0.39
APOC1-207ENST00000592176 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
APOC1-207ENST00000592176 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
APOC1-207ENST00000592176 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
APOC1-207ENST00000592176 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
APOC1-207ENST00000592176 PTCD1O75127 700 aaKnown RBP12.61□□□□□ -0.39
APOC1-207ENST00000592176 KCNA3P22001 575 aa12.61□□□□□ -0.39
APOC1-207ENST00000592176 MTHFSP49914 203 aa12.61□□□□□ -0.39
APOC1-207ENST00000592176 AMOTQ4VCS5 1084 aa12.61□□□□□ -0.39
APOC1-207ENST00000592176 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
APOC1-207ENST00000592176 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
APOC1-207ENST00000592176 PKD1L3Q7Z443 1732 aa12.6□□□□□ -0.39
APOC1-207ENST00000592176 ZNF530Q6P9A1 599 aaPredicted RBP12.6□□□□□ -0.39
APOC1-207ENST00000592176 MAP2P11137 1827 aaKnown RBP12.6□□□□□ -0.39
APOC1-207ENST00000592176 DALRD3Q5D0E6 543 aaKnown RBP12.59□□□□□ -0.39
APOC1-207ENST00000592176 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
APOC1-207ENST00000592176 RBM46Q8TBY0 533 aaKnown RBP12.59□□□□□ -0.39
APOC1-207ENST00000592176 KDRP35968 1356 aa12.58□□□□□ -0.4
APOC1-207ENST00000592176 PLEKHG2Q9H7P9 1386 aa12.58□□□□□ -0.4
APOC1-207ENST00000592176 KIF20BQ96Q89 1820 aa12.58□□□□□ -0.4
APOC1-207ENST00000592176 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.4
APOC1-207ENST00000592176 FKBP8Q14318 412 aa12.58□□□□□ -0.4
APOC1-207ENST00000592176 C1orf141Q5JVX7 400 aa12.58□□□□□ -0.4
APOC1-207ENST00000592176 C10orf71Q711Q0 1435 aa12.58□□□□□ -0.4
APOC1-207ENST00000592176 SRP68Q9UHB9 627 aaKnown RBP12.58□□□□□ -0.4
APOC1-207ENST00000592176 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
APOC1-207ENST00000592176 FSTL1Q12841 308 aa12.57□□□□□ -0.4
APOC1-207ENST00000592176 PANK3Q9H999 370 aa12.57□□□□□ -0.4
APOC1-207ENST00000592176 RRAGCQ9HB90 399 aa12.57□□□□□ -0.4
APOC1-207ENST00000592176 CICQ96RK0 1608 aaPredicted RBP12.57□□□□□ -0.4
APOC1-207ENST00000592176 KDM2BQ8NHM5 1336 aa12.57□□□□□ -0.4
APOC1-207ENST00000592176 RNF181Q9P0P0 153 aa12.56□□□□□ -0.4
APOC1-207ENST00000592176 ZPR1O75312 459 aa12.55□□□□□ -0.4
APOC1-207ENST00000592176 TM4SF1P30408 202 aa12.55□□□□□ -0.4
APOC1-207ENST00000592176 CHRNA5P30532 468 aa12.55□□□□□ -0.4
APOC1-207ENST00000592176 DDR1Q08345 913 aa12.55□□□□□ -0.4
APOC1-207ENST00000592176 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
APOC1-207ENST00000592176 INTS5Q6P9B9 1019 aaKnown RBP12.55□□□□□ -0.4
APOC1-207ENST00000592176 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
APOC1-207ENST00000592176 HTRA3P83110 453 aa12.54□□□□□ -0.4
APOC1-207ENST00000592176 AEBP1Q8IUX7 1158 aa12.54□□□□□ -0.4
APOC1-207ENST00000592176 KLRG1Q96E93 195 aa12.54□□□□□ -0.4
APOC1-207ENST00000592176 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
APOC1-207ENST00000592176 KDM6AO15550 1401 aaPredicted RBP12.54□□□□□ -0.4
APOC1-207ENST00000592176 POLRMTO00411 1230 aaKnown RBP12.53□□□□□ -0.4
APOC1-207ENST00000592176 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
APOC1-207ENST00000592176 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
APOC1-207ENST00000592176 N4BP2Q86UW6 1770 aaPredicted RBP12.52□□□□□ -0.41
APOC1-207ENST00000592176 JMYQ8N9B5 988 aa12.52□□□□□ -0.41
APOC1-207ENST00000592176 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
APOC1-207ENST00000592176 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
APOC1-207ENST00000592176 AKAP4Q5JQC9 854 aa12.51□□□□□ -0.41
APOC1-207ENST00000592176 DNAJC10Q8IXB1 793 aa12.51□□□□□ -0.41
APOC1-207ENST00000592176 SMC1BQ8NDV3 1235 aa12.51□□□□□ -0.41
APOC1-207ENST00000592176 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
APOC1-207ENST00000592176 CYP19A1P11511 503 aaPredicted RBP12.5□□□□□ -0.41
APOC1-207ENST00000592176 IL13P35225 146 aa12.5□□□□□ -0.41
APOC1-207ENST00000592176 EIF4G2P78344 907 aaKnown RBP eCLIP12.5□□□□□ -0.41
APOC1-207ENST00000592176 COL13A1Q5TAT6 717 aaPredicted RBP12.5□□□□□ -0.41
APOC1-207ENST00000592176 LGR6Q9HBX8 967 aa12.5□□□□□ -0.41
APOC1-207ENST00000592176 NARFQ9UHQ1 456 aa12.5□□□□□ -0.41
APOC1-207ENST00000592176 KIAA1551Q9HCM1 1747 aa12.49□□□□□ -0.41
APOC1-207ENST00000592176 ZNF831Q5JPB2 1677 aa12.49□□□□□ -0.41
APOC1-207ENST00000592176 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
APOC1-207ENST00000592176 SERPINB2P05120 415 aa12.49□□□□□ -0.41
APOC1-207ENST00000592176 VEGFAP15692 232 aaPredicted RBP12.49□□□□□ -0.41
APOC1-207ENST00000592176 NFIXQ14938 502 aa12.49□□□□□ -0.41
APOC1-207ENST00000592176 SLC52A2Q9HAB3 445 aa12.49□□□□□ -0.41
APOC1-207ENST00000592176 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
APOC1-207ENST00000592176 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
APOC1-207ENST00000592176 GLTPD2A6NH11 291 aa12.48□□□□□ -0.41
APOC1-207ENST00000592176 HSPA5P11021 654 aaKnown RBP12.48□□□□□ -0.41
APOC1-207ENST00000592176 LMNB1P20700 586 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms