RNA–Protein interactions for RNA: ENST00000591611.5

TUBD1-212, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-212ENST00000591611 TNS2Q63HR2 1409 aa11.71□□□□□ -0.53
TUBD1-212ENST00000591611 POTEMA6NI47 508 aa11.71□□□□□ -0.53
TUBD1-212ENST00000591611 DDB1Q16531 1140 aa11.71□□□□□ -0.53
TUBD1-212ENST00000591611 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.53
TUBD1-212ENST00000591611 BRWD3Q6RI45 1802 aa11.71□□□□□ -0.54
TUBD1-212ENST00000591611 PLEKHG2Q9H7P9 1386 aa11.7□□□□□ -0.54
TUBD1-212ENST00000591611 PKD1L3Q7Z443 1732 aa11.7□□□□□ -0.54
TUBD1-212ENST00000591611 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
TUBD1-212ENST00000591611 EXOC5O00471 708 aa11.7□□□□□ -0.54
TUBD1-212ENST00000591611 FCHSD2O94868 740 aa11.7□□□□□ -0.54
TUBD1-212ENST00000591611 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
TUBD1-212ENST00000591611 WDR43Q15061 677 aaKnown RBP eCLIP11.7□□□□□ -0.54
TUBD1-212ENST00000591611 ZCRB1Q8TBF4 217 aaKnown RBP11.7□□□□□ -0.54
TUBD1-212ENST00000591611 PNISRQ8TF01 805 aaKnown RBP11.7□□□□□ -0.54
TUBD1-212ENST00000591611 CCER2I3L3R5 266 aa11.69□□□□□ -0.54
TUBD1-212ENST00000591611 PDE3BQ13370 1112 aa11.69□□□□□ -0.54
TUBD1-212ENST00000591611 KRT27Q7Z3Y8 459 aa11.69□□□□□ -0.54
TUBD1-212ENST00000591611 MARCH10Q8NA82 808 aaPredicted RBP11.69□□□□□ -0.54
TUBD1-212ENST00000591611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.69□□□□□ -0.547e-6■■□□□ 12.8
TUBD1-212ENST00000591611 ADAMTS8Q9UP79 889 aa11.69□□□□□ -0.54
TUBD1-212ENST00000591611 SHANK3Q9BYB0 1731 aa11.69□□□□□ -0.54
TUBD1-212ENST00000591611 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
TUBD1-212ENST00000591611 FAM182BQ5T319 152 aa11.68□□□□□ -0.54
TUBD1-212ENST00000591611 DDX54Q8TDD1 881 aaKnown RBP11.68□□□□□ -0.54
TUBD1-212ENST00000591611 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
TUBD1-212ENST00000591611 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
TUBD1-212ENST00000591611 SPG7Q9UQ90 795 aa11.68□□□□□ -0.54
TUBD1-212ENST00000591611 CYP27B1O15528 508 aa11.67□□□□□ -0.54
TUBD1-212ENST00000591611 AMOTQ4VCS5 1084 aa11.67□□□□□ -0.54
TUBD1-212ENST00000591611 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
TUBD1-212ENST00000591611 PLEKHF1Q96S99 279 aa11.67□□□□□ -0.54
TUBD1-212ENST00000591611 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
TUBD1-212ENST00000591611 PCDH11XQ9BZA7 1347 aa11.66□□□□□ -0.54
TUBD1-212ENST00000591611 PCDH11YQ9BZA8 1340 aa11.66□□□□□ -0.54
TUBD1-212ENST00000591611 SEC24BO95487 1268 aa11.66□□□□□ -0.54
TUBD1-212ENST00000591611 MTHFSDQ2M296 383 aaKnown RBP11.66□□□□□ -0.54
TUBD1-212ENST00000591611 ZNF530Q6P9A1 599 aaPredicted RBP11.66□□□□□ -0.54
TUBD1-212ENST00000591611 PHKG2P15735 406 aa11.65□□□□□ -0.54
TUBD1-212ENST00000591611 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
TUBD1-212ENST00000591611 CCDC146Q8IYE0 955 aa11.65□□□□□ -0.54
TUBD1-212ENST00000591611 IFNL2Q8IZJ0 200 aa11.64□□□□□ -0.55
TUBD1-212ENST00000591611 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
TUBD1-212ENST00000591611 BCL9O00512 1426 aa11.63□□□□□ -0.55
TUBD1-212ENST00000591611 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
TUBD1-212ENST00000591611 FAM196AQ6ZSG2 479 aa11.63□□□□□ -0.55
TUBD1-212ENST00000591611 FAM9BQ8IZU0 186 aa11.63□□□□□ -0.55
TUBD1-212ENST00000591611 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
TUBD1-212ENST00000591611 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
TUBD1-212ENST00000591611 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
TUBD1-212ENST00000591611 NEFMP07197 916 aa11.62□□□□□ -0.55
TUBD1-212ENST00000591611 AKAP4Q5JQC9 854 aa11.62□□□□□ -0.55
TUBD1-212ENST00000591611 C1orf141Q5JVX7 400 aa11.62□□□□□ -0.55
TUBD1-212ENST00000591611 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
TUBD1-212ENST00000591611 KDM6AO15550 1401 aaPredicted RBP11.61□□□□□ -0.55
TUBD1-212ENST00000591611 NFE2L2Q16236 605 aa11.61□□□□□ -0.55
TUBD1-212ENST00000591611 MAP3K5Q99683 1374 aa11.61□□□□□ -0.55
TUBD1-212ENST00000591611 TOGARAM1Q9Y4F4 1720 aa11.6□□□□□ -0.55
TUBD1-212ENST00000591611 GNAT3A8MTJ3 354 aa11.6□□□□□ -0.55
TUBD1-212ENST00000591611 HSP90AB1P08238 724 aaKnown RBP11.6□□□□□ -0.55
TUBD1-212ENST00000591611 TMPOP42166 694 aaKnown RBP11.6□□□□□ -0.55
TUBD1-212ENST00000591611 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
TUBD1-212ENST00000591611 PTF1AQ7RTS3 328 aa11.6□□□□□ -0.55
TUBD1-212ENST00000591611 ACSBG1Q96GR2 724 aa11.6□□□□□ -0.55
TUBD1-212ENST00000591611 DCAF5Q96JK2 942 aa11.6□□□□□ -0.55
TUBD1-212ENST00000591611 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
TUBD1-212ENST00000591611 ADAMTS7Q9UKP4 1686 aa11.59□□□□□ -0.55
TUBD1-212ENST00000591611 SBF2Q86WG5 1849 aa11.59□□□□□ -0.55
TUBD1-212ENST00000591611 APAF1O14727 1248 aa11.59□□□□□ -0.55
TUBD1-212ENST00000591611 KCNQ2O43526 872 aa11.59□□□□□ -0.55
TUBD1-212ENST00000591611 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
TUBD1-212ENST00000591611 LGR6Q9HBX8 967 aa11.59□□□□□ -0.55
TUBD1-212ENST00000591611 RRP7AQ9Y3A4 280 aaKnown RBP11.59□□□□□ -0.55
TUBD1-212ENST00000591611 EP400Q96L91 3159 aa11.58□□□□□ -0.56
TUBD1-212ENST00000591611 RNMTO43148 476 aaKnown RBP11.58□□□□□ -0.56
TUBD1-212ENST00000591611 TRIM37O94972 964 aa11.58□□□□□ -0.56
TUBD1-212ENST00000591611 PRIM1P49642 420 aaKnown RBP11.58□□□□□ -0.56
TUBD1-212ENST00000591611 RIPK4P57078 832 aa11.58□□□□□ -0.56
TUBD1-212ENST00000591611 IL17REQ8NFR9 667 aa11.58□□□□□ -0.56
TUBD1-212ENST00000591611 NHSQ6T4R5 1651 aa11.58□□□□□ -0.56
TUBD1-212ENST00000591611 DLG5Q8TDM6 1919 aa11.58□□□□□ -0.56
TUBD1-212ENST00000591611 SCN11AQ9UI33 1791 aa11.57□□□□□ -0.56
TUBD1-212ENST00000591611 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
TUBD1-212ENST00000591611 ERVV-2B6SEH9 535 aa11.57□□□□□ -0.56
TUBD1-212ENST00000591611 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
TUBD1-212ENST00000591611 DCTN1Q14203 1278 aa11.57□□□□□ -0.56
TUBD1-212ENST00000591611 NEUROD2Q15784 382 aa11.57□□□□□ -0.56
TUBD1-212ENST00000591611 LCE2DQ5TA82 110 aaPredicted RBP11.57□□□□□ -0.56
TUBD1-212ENST00000591611 MCM10Q7L590 875 aa11.57□□□□□ -0.56
TUBD1-212ENST00000591611 BCL11BQ9C0K0 894 aaPredicted RBP11.57□□□□□ -0.56
TUBD1-212ENST00000591611 CEMIPQ8WUJ3 1361 aa11.56□□□□□ -0.56
TUBD1-212ENST00000591611 PIGBQ92521 554 aa11.56□□□□□ -0.56
TUBD1-212ENST00000591611 RTF1Q92541 710 aaKnown RBP11.56□□□□□ -0.56
TUBD1-212ENST00000591611 SYTL4Q96C24 671 aaPredicted RBP11.56□□□□□ -0.56
TUBD1-212ENST00000591611 MRC1P22897 1456 aa11.56□□□□□ -0.56
TUBD1-212ENST00000591611 ITGB4P16144 1822 aa11.56□□□□□ -0.56
TUBD1-212ENST00000591611 TNS1Q9HBL0 1735 aaKnown RBP11.55□□□□□ -0.56
TUBD1-212ENST00000591611 CABP4P57796 275 aa11.55□□□□□ -0.56
TUBD1-212ENST00000591611 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
TUBD1-212ENST00000591611 THUMPD2Q9BTF0 503 aaKnown RBP11.55□□□□□ -0.56
TUBD1-212ENST00000591611 TMOD3Q9NYL9 352 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms