RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 FAM98CQ17RN3 349 aaKnown RBP21.83■■□□□ 1.09
GCDH-212ENST00000590530 EXOC6Q8TAG9 804 aa21.83■■□□□ 1.08
GCDH-212ENST00000590530 SLC52A2Q9HAB3 445 aa21.83■■□□□ 1.08
GCDH-212ENST00000590530 TNNQ9UQP3 1299 aa21.82■■□□□ 1.08
GCDH-212ENST00000590530 THRAP3Q9Y2W1 955 aaKnown RBP21.82■■□□□ 1.08
GCDH-212ENST00000590530 EXOC5O00471 708 aa21.81■■□□□ 1.08
GCDH-212ENST00000590530 SLC39A6Q13433 755 aa21.81■■□□□ 1.08
GCDH-212ENST00000590530 NKX1-1Q15270 411 aaPredicted RBP21.81■■□□□ 1.08
GCDH-212ENST00000590530 VIRMAQ69YN4 1812 aaKnown RBP21.81■■□□□ 1.08
GCDH-212ENST00000590530 BARGINQ6ZT62 677 aa21.8■■□□□ 1.08
GCDH-212ENST00000590530 FRAT1Q92837 279 aaPredicted RBP21.8■■□□□ 1.08
GCDH-212ENST00000590530 SMC4Q9NTJ3 1288 aa21.8■■□□□ 1.08
GCDH-212ENST00000590530 SCN11AQ9UI33 1791 aa21.8■■□□□ 1.08
GCDH-212ENST00000590530 HSP90AB1P08238 724 aaKnown RBP21.79■■□□□ 1.08
GCDH-212ENST00000590530 EIF4A1P60842 406 aaKnown RBP21.79■■□□□ 1.08
GCDH-212ENST00000590530 B4GALNT3Q6L9W6 998 aa21.79■■□□□ 1.08
GCDH-212ENST00000590530 CRBNQ96SW2 442 aa21.79■■□□□ 1.08
GCDH-212ENST00000590530 BABAM1Q9NWV8 329 aa21.79■■□□□ 1.08
GCDH-212ENST00000590530 WNK3Q9BYP7 1800 aa21.79■■□□□ 1.08
GCDH-212ENST00000590530 CABP4P57796 275 aa21.78■■□□□ 1.08
GCDH-212ENST00000590530 DDB1Q16531 1140 aa21.78■■□□□ 1.08
GCDH-212ENST00000590530 ZNF428Q96B54 188 aa21.78■■□□□ 1.08
GCDH-212ENST00000590530 TNS2Q63HR2 1409 aa21.78■■□□□ 1.08
GCDH-212ENST00000590530 PDE3AQ14432 1141 aa21.77■■□□□ 1.08
GCDH-212ENST00000590530 SIPA1L3O60292 1781 aaPredicted RBP21.77■■□□□ 1.08
GCDH-212ENST00000590530 MARCH10Q8NA82 808 aaPredicted RBP21.77■■□□□ 1.08
GCDH-212ENST00000590530 CCDC136Q96JN2 1154 aa21.77■■□□□ 1.08
GCDH-212ENST00000590530 MRC1P22897 1456 aa21.77■■□□□ 1.07
GCDH-212ENST00000590530 PRAMEF22A3QJZ6 481 aa21.76■■□□□ 1.07
GCDH-212ENST00000590530 MRPL50Q8N5N7 158 aaKnown RBP21.76■■□□□ 1.07
GCDH-212ENST00000590530 NECTIN2Q92692 538 aa21.76■■□□□ 1.07
GCDH-212ENST00000590530 CDCA7Q9BWT1 371 aaPredicted RBP21.76■■□□□ 1.07
GCDH-212ENST00000590530 KDM3BQ7LBC6 1761 aa21.75■■□□□ 1.07
GCDH-212ENST00000590530 FBXO41Q8TF61 875 aa21.75■■□□□ 1.07
GCDH-212ENST00000590530 GJD4Q96KN9 370 aaPredicted RBP21.75■■□□□ 1.07
GCDH-212ENST00000590530 NOB1Q9ULX3 412 aaKnown RBP21.75■■□□□ 1.07
GCDH-212ENST00000590530 ALDH1L2Q3SY69 923 aa21.74■■□□□ 1.07
GCDH-212ENST00000590530 ZNF790Q6PG37 636 aa21.74■■□□□ 1.07
GCDH-212ENST00000590530 TOGARAM1Q9Y4F4 1720 aa21.74■■□□□ 1.07
GCDH-212ENST00000590530 ERVV-2B6SEH9 535 aa21.73■■□□□ 1.07
GCDH-212ENST00000590530 ATRNO75882 1429 aa21.73■■□□□ 1.07
GCDH-212ENST00000590530 GLI3P10071 1580 aa21.73■■□□□ 1.07
GCDH-212ENST00000590530 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.73■■□□□ 1.07
GCDH-212ENST00000590530 RLBP1P12271 317 aa21.73■■□□□ 1.07
GCDH-212ENST00000590530 CANXP27824 592 aaKnown RBP21.73■■□□□ 1.07
GCDH-212ENST00000590530 PANK1Q8TE04 598 aa21.73■■□□□ 1.07
GCDH-212ENST00000590530 CLUAP1Q96AJ1 413 aa21.72■■□□□ 1.07
GCDH-212ENST00000590530 QTRT2Q9H974 415 aaKnown RBP21.72■■□□□ 1.07
GCDH-212ENST00000590530 A0A0G2JS52 829 aa21.71■■□□□ 1.07
GCDH-212ENST00000590530 MYT1Q01538 1121 aa21.71■■□□□ 1.07
GCDH-212ENST00000590530 ZNF496Q96IT1 587 aaPredicted RBP21.71■■□□□ 1.07
GCDH-212ENST00000590530 PIGBQ92521 554 aa21.71■■□□□ 1.07
GCDH-212ENST00000590530 TRPC5Q9UL62 973 aaPredicted RBP21.71■■□□□ 1.07
GCDH-212ENST00000590530 HEG1Q9ULI3 1381 aa21.7■■□□□ 1.06
GCDH-212ENST00000590530 BRPF1P55201 1214 aaPredicted RBP21.7■■□□□ 1.06
GCDH-212ENST00000590530 GIGYF1O75420 1035 aaPredicted RBP21.69■■□□□ 1.06
GCDH-212ENST00000590530 EIF2S2P20042 333 aaKnown RBP21.69■■□□□ 1.06
GCDH-212ENST00000590530 KIF16BQ96L93 1317 aa21.69■■□□□ 1.06
GCDH-212ENST00000590530 TRIM27P14373 513 aa21.69■■□□□ 1.06
GCDH-212ENST00000590530 FAM182BQ5T319 152 aa21.69■■□□□ 1.06
GCDH-212ENST00000590530 ACSBG1Q96GR2 724 aa21.69■■□□□ 1.06
GCDH-212ENST00000590530 PRIM1P49642 420 aaKnown RBP21.68■■□□□ 1.06
GCDH-212ENST00000590530 G2E3Q7L622 706 aa21.68■■□□□ 1.06
GCDH-212ENST00000590530 TMOD3Q9NYL9 352 aa21.68■■□□□ 1.06
GCDH-212ENST00000590530 SLC4A2P04920 1241 aa21.67■■□□□ 1.06
GCDH-212ENST00000590530 MS4A1P11836 297 aa21.67■■□□□ 1.06
GCDH-212ENST00000590530 ZKSCAN2Q63HK3 967 aa21.67■■□□□ 1.06
GCDH-212ENST00000590530 SYTL4Q96C24 671 aaPredicted RBP21.67■■□□□ 1.06
GCDH-212ENST00000590530 ASAP1Q9ULH1 1129 aa21.67■■□□□ 1.06
GCDH-212ENST00000590530 HDGFL1Q5TGJ6 251 aa21.66■■□□□ 1.06
GCDH-212ENST00000590530 COG6Q9Y2V7 657 aa21.66■■□□□ 1.06
GCDH-212ENST00000590530 ANXA1P04083 346 aa21.65■■□□□ 1.06
GCDH-212ENST00000590530 ATF7IPQ6VMQ6 1270 aa21.65■■□□□ 1.06
GCDH-212ENST00000590530 TTC5Q8N0Z6 440 aa21.65■■□□□ 1.06
GCDH-212ENST00000590530 THSD7AQ9UPZ6 1657 aa21.65■■□□□ 1.06
GCDH-212ENST00000590530 PTCD1O75127 700 aaKnown RBP21.64■■□□□ 1.06
GCDH-212ENST00000590530 AAMPQ13685 434 aa21.64■■□□□ 1.06
GCDH-212ENST00000590530 KCNQ2O43526 872 aa21.64■■□□□ 1.05
GCDH-212ENST00000590530 ONECUT3O60422 494 aaPredicted RBP21.64■■□□□ 1.05
GCDH-212ENST00000590530 SEPT12Q8IYM1 358 aa21.64■■□□□ 1.05
GCDH-212ENST00000590530 ATG3Q9NT62 314 aa21.64■■□□□ 1.05
GCDH-212ENST00000590530 CCDC30Q5VVM6 783 aa21.63■■□□□ 1.05
GCDH-212ENST00000590530 PTF1AQ7RTS3 328 aa21.63■■□□□ 1.05
GCDH-212ENST00000590530 CHPF2Q9P2E5 772 aa21.63■■□□□ 1.05
GCDH-212ENST00000590530 USP16Q9Y5T5 823 aa21.63■■□□□ 1.05
GCDH-212ENST00000590530 BCL9O00512 1426 aa21.63■■□□□ 1.05
GCDH-212ENST00000590530 PROSER3Q2NL68 480 aa21.62■■□□□ 1.05
GCDH-212ENST00000590530 IPO8O15397 1037 aaKnown RBP21.62■■□□□ 1.05
GCDH-212ENST00000590530 HOXB7P09629 217 aa21.62■■□□□ 1.05
GCDH-212ENST00000590530 DZIP1LQ8IYY4 767 aaKnown RBP21.62■■□□□ 1.05
GCDH-212ENST00000590530 FMNL2Q96PY5 1086 aa21.62■■□□□ 1.05
GCDH-212ENST00000590530 PHAXQ9H814 394 aaKnown RBP21.62■■□□□ 1.05
GCDH-212ENST00000590530 KCPQ6ZWJ8 1503 aa21.62■■□□□ 1.05
GCDH-212ENST00000590530 DOT1LQ8TEK3 1739 aa21.61■■□□□ 1.05
GCDH-212ENST00000590530 SOS1Q07889 1333 aaPredicted RBP21.61■■□□□ 1.05
GCDH-212ENST00000590530 ITGB4P16144 1822 aa21.61■■□□□ 1.05
GCDH-212ENST00000590530 PIP4K2AP48426 406 aaPredicted RBP21.6■■□□□ 1.05
GCDH-212ENST00000590530 C5P01031 1676 aa21.6■■□□□ 1.05
GCDH-212ENST00000590530 TMEM57Q8N5G2 664 aa21.6■■□□□ 1.05
GCDH-212ENST00000590530 STK31Q9BXU1 1019 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms