RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 MIPOL1Q8TD10 442 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.11□□□□□ -0.95
LAMA3-210ENST00000588770 RAD50Q92878 1312 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 ZNF692Q9BU19 519 aaPredicted RBP9.11□□□□□ -0.95
LAMA3-210ENST00000588770 PLEKHH1Q9ULM0 1364 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 GOLGA6CA6NDK9 693 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 GOLGA6BA6NDN3 693 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 GOLGA6DP0CG33 693 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 CASTP20810 708 aaKnown RBP9.11□□□□□ -0.95
LAMA3-210ENST00000588770 MCM6Q14566 821 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 EXOC4Q96A65 974 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 GOLGA6AQ9NYA3 693 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 CCDC171Q6TFL3 1326 aa9.11□□□□□ -0.95
LAMA3-210ENST00000588770 CDKL5O76039 1030 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 GCFC2P16383 781 aaKnown RBP9.1□□□□□ -0.95
LAMA3-210ENST00000588770 RANBP1P43487 201 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 NAA30Q147X3 362 aaPredicted RBP9.1□□□□□ -0.95
LAMA3-210ENST00000588770 INF2Q27J81 1249 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 POTEDQ86YR6 584 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 VPS18Q9P253 973 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 CLIP2Q9UDT6 1046 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 ZCRB1Q8TBF4 217 aaKnown RBP9.1□□□□□ -0.95
LAMA3-210ENST00000588770 RSRC1Q96IZ7 334 aaKnown RBP9.1□□□□□ -0.95
LAMA3-210ENST00000588770 RUFY1Q96T51 708 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 MPHOSPH9Q99550 1183 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 DHX8Q14562 1220 aaKnown RBP9.1□□□□□ -0.95
LAMA3-210ENST00000588770 SMC1AQ14683 1233 aaKnown RBP9.1□□□□□ -0.95
LAMA3-210ENST00000588770 CCDC102AQ96A19 550 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 MIEF2Q96C03 454 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 IQCGQ9H095 443 aaKnown RBP9.1□□□□□ -0.95
LAMA3-210ENST00000588770 G3BP2Q9UN86 482 aaKnown RBP9.1□□□□□ -0.95
LAMA3-210ENST00000588770 FRMD3A2A2Y4 597 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 LIG3P49916 1009 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 ANKRD23Q86SG2 305 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 RASSF8Q8NHQ8 419 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 SMC3Q9UQE7 1217 aa9.1□□□□□ -0.95
LAMA3-210ENST00000588770 SHTN1A0MZ66 631 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 SNUPNO95149 360 aaKnown RBP9.09□□□□□ -0.95
LAMA3-210ENST00000588770 ANKRD45Q5TZF3 282 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 FAM114A1Q8IWE2 563 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 CFAP53Q96M91 514 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 ARFGAP3Q9NP61 516 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 SAAL1Q96ER3 474 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 THOC1Q96FV9 657 aaKnown RBP9.09□□□□□ -0.95
LAMA3-210ENST00000588770 EBAG9O00559 213 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 PPFIA2O75334 1257 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 SLFNL1Q499Z3 407 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 MICALCLQ6ZW33 695 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 ERICH3Q5RHP9 1530 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 PNMA6AP0CW24 399 aaPredicted RBP9.09□□□□□ -0.95
LAMA3-210ENST00000588770 ZC3H12AQ5D1E8 599 aaKnown RBP9.09□□□□□ -0.95
LAMA3-210ENST00000588770 HHATQ5VTY9 493 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 KIF1BPQ96EK5 621 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 LNPKQ9C0E8 428 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 PYCARDQ9ULZ3 195 aa9.09□□□□□ -0.95
LAMA3-210ENST00000588770 BRD4O60885 1362 aaPredicted RBP9.09□□□□□ -0.95
LAMA3-210ENST00000588770 HCLS1P14317 486 aaPredicted RBP9.08□□□□□ -0.96
LAMA3-210ENST00000588770 PAX3P23760 479 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 NUTM2GQ5VZR2 741 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 DZIP1Q86YF9 867 aaKnown RBP9.08□□□□□ -0.96
LAMA3-210ENST00000588770 MYLK4Q86YV6 388 aaPredicted RBP9.08□□□□□ -0.96
LAMA3-210ENST00000588770 RNF168Q8IYW5 571 aaPredicted RBP9.08□□□□□ -0.96
LAMA3-210ENST00000588770 LMBRD1Q9NUN5 540 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 INPP5BP32019 993 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 SH3BGRP55822 239 aaPredicted RBP9.08□□□□□ -0.96
LAMA3-210ENST00000588770 CCDC181Q5TID7 509 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 ROCK1Q13464 1354 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 BECN2A8MW95 431 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 AP1G2O75843 785 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 ECM2O94769 699 aaPredicted RBP9.08□□□□□ -0.96
LAMA3-210ENST00000588770 ZNF446Q9NWS9 450 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 PLEKHG2Q9H7P9 1386 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 ANKRD65E5RJM6 399 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 APAF1O14727 1248 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 PTGS1P23219 599 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 ARMC9Q7Z3E5 817 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 EXOC8Q8IYI6 725 aa9.08□□□□□ -0.96
LAMA3-210ENST00000588770 ERLIN1O75477 346 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 IGHDP01880 384 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 TMF1P82094 1093 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 CRYMQ14894 314 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 RUSC2Q8N2Y8 1516 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 ST20-MTHFSA0A0A6YYL1 179 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 ST5P78524 1137 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 HSP90AB2PQ58FF8 381 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 RRP7AQ9Y3A4 280 aaKnown RBP9.07□□□□□ -0.96
LAMA3-210ENST00000588770 LRRC23Q53EV4 343 aaPredicted RBP9.07□□□□□ -0.96
LAMA3-210ENST00000588770 ARL10Q8N8L6 244 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 CABS1Q96KC9 395 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 CCDC114Q96M63 670 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 TMEM63CQ9P1W3 806 aa9.07□□□□□ -0.96
LAMA3-210ENST00000588770 SPAG9O60271 1321 aaKnown RBP9.07□□□□□ -0.96
LAMA3-210ENST00000588770 ECEL1O95672 775 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 CORO7P57737 925 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 TSPAN18Q96SJ8 248 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 CCDC183Q5T5S1 534 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 CCDC70Q6NSX1 233 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 TRMT1Q9NXH9 659 aaKnown RBP9.06□□□□□ -0.96
LAMA3-210ENST00000588770 MAPKBP1O60336 1514 aa9.06□□□□□ -0.96
LAMA3-210ENST00000588770 SCAPERQ9BY12 1400 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms