RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 KIAA1551Q9HCM1 1747 aa11.98□□□□□ -0.49
SDF2-204ENST00000587338 C10orf71Q711Q0 1435 aa11.98□□□□□ -0.49
SDF2-204ENST00000587338 ST20-MTHFSA0A0A6YYL1 179 aa11.98□□□□□ -0.49
SDF2-204ENST00000587338 FCHSD2O94868 740 aa11.98□□□□□ -0.49
SDF2-204ENST00000587338 TGFB2P61812 414 aa11.98□□□□□ -0.49
SDF2-204ENST00000587338 RBM46Q8TBY0 533 aaKnown RBP11.98□□□□□ -0.49
SDF2-204ENST00000587338 KLRG1Q96E93 195 aa11.98□□□□□ -0.49
SDF2-204ENST00000587338 ASAP1Q9ULH1 1129 aa11.98□□□□□ -0.49
SDF2-204ENST00000587338 SPG7Q9UQ90 795 aa11.98□□□□□ -0.49
SDF2-204ENST00000587338 KIF13BQ9NQT8 1826 aa11.97□□□□□ -0.49
SDF2-204ENST00000587338 DPEP1P16444 411 aa11.97□□□□□ -0.49
SDF2-204ENST00000587338 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
SDF2-204ENST00000587338 C9orf131Q5VYM1 1079 aa11.97□□□□□ -0.49
SDF2-204ENST00000587338 KIF24Q5T7B8 1368 aa11.96□□□□□ -0.49
SDF2-204ENST00000587338 TONSLQ96HA7 1378 aa11.96□□□□□ -0.49
SDF2-204ENST00000587338 PLEKHG2Q9H7P9 1386 aa11.96□□□□□ -0.49
SDF2-204ENST00000587338 TMF1P82094 1093 aa11.96□□□□□ -0.49
SDF2-204ENST00000587338 TNS4Q8IZW8 715 aa11.96□□□□□ -0.49
SDF2-204ENST00000587338 NLGN1Q8N2Q7 840 aa11.96□□□□□ -0.49
SDF2-204ENST00000587338 CCDC87Q9NVE4 849 aa11.96□□□□□ -0.49
SDF2-204ENST00000587338 RTCBQ9Y3I0 505 aaKnown RBP11.96□□□□□ -0.49
SDF2-204ENST00000587338 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
SDF2-204ENST00000587338 PPM1GO15355 546 aaPredicted RBP11.95□□□□□ -0.5
SDF2-204ENST00000587338 FSTL1Q12841 308 aa11.95□□□□□ -0.5
SDF2-204ENST00000587338 TRAPPC3LQ5T215 181 aa11.95□□□□□ -0.5
SDF2-204ENST00000587338 JMYQ8N9B5 988 aa11.95□□□□□ -0.5
SDF2-204ENST00000587338 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
SDF2-204ENST00000587338 KIF20BQ96Q89 1820 aa11.95□□□□□ -0.5
SDF2-204ENST00000587338 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
SDF2-204ENST00000587338 KDM2BQ8NHM5 1336 aa11.94□□□□□ -0.5
SDF2-204ENST00000587338 ADRA2BP18089 450 aa11.94□□□□□ -0.5
SDF2-204ENST00000587338 ATG3Q9NT62 314 aa11.94□□□□□ -0.5
SDF2-204ENST00000587338 PARP3Q9Y6F1 533 aa11.94□□□□□ -0.5
SDF2-204ENST00000587338 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
SDF2-204ENST00000587338 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
SDF2-204ENST00000587338 ARHGEF1Q92888 912 aaKnown RBP11.93□□□□□ -0.5
SDF2-204ENST00000587338 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
SDF2-204ENST00000587338 RNF181Q9P0P0 153 aa11.93□□□□□ -0.5
SDF2-204ENST00000587338 KDRP35968 1356 aa11.92□□□□□ -0.5
SDF2-204ENST00000587338 GYS1P13807 737 aa11.92□□□□□ -0.5
SDF2-204ENST00000587338 PHKG2P15735 406 aa11.92□□□□□ -0.5
SDF2-204ENST00000587338 RFC4P35249 363 aa11.92□□□□□ -0.5
SDF2-204ENST00000587338 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
SDF2-204ENST00000587338 BRCA1P38398 1863 aaKnown RBP11.91□□□□□ -0.5
SDF2-204ENST00000587338 KCNA3P22001 575 aa11.91□□□□□ -0.5
SDF2-204ENST00000587338 PRELPP51888 382 aa11.91□□□□□ -0.5
SDF2-204ENST00000587338 EYA1Q99502 592 aa11.91□□□□□ -0.5
SDF2-204ENST00000587338 RRAGCQ9HB90 399 aa11.91□□□□□ -0.5
SDF2-204ENST00000587338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
SDF2-204ENST00000587338 PIM2Q9P1W9 311 aa11.91□□□□□ -0.5
SDF2-204ENST00000587338 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
SDF2-204ENST00000587338 DALRD3Q5D0E6 543 aaKnown RBP11.9□□□□□ -0.5
SDF2-204ENST00000587338 SMC1BQ8NDV3 1235 aa11.9□□□□□ -0.5
SDF2-204ENST00000587338 DCAF5Q96JK2 942 aa11.9□□□□□ -0.5
SDF2-204ENST00000587338 SLC4A9Q96Q91 983 aa11.9□□□□□ -0.5
SDF2-204ENST00000587338 ARFGEF1Q9Y6D6 1849 aa11.9□□□□□ -0.5
SDF2-204ENST00000587338 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
SDF2-204ENST00000587338 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
SDF2-204ENST00000587338 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
SDF2-204ENST00000587338 WASHC2AQ641Q2 1341 aa11.88□□□□□ -0.51
SDF2-204ENST00000587338 CHRNA5P30532 468 aa11.88□□□□□ -0.51
SDF2-204ENST00000587338 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
SDF2-204ENST00000587338 ANKRD26Q9UPS8 1709 aa11.87□□□□□ -0.51
SDF2-204ENST00000587338 HSPA1AP0DMV8 641 aaKnown RBP11.87□□□□□ -0.51
SDF2-204ENST00000587338 HSPA1BP0DMV9 641 aaKnown RBP11.87□□□□□ -0.51
SDF2-204ENST00000587338 DDR1Q08345 913 aa11.87□□□□□ -0.51
SDF2-204ENST00000587338 CARD14Q9BXL6 1004 aa11.87□□□□□ -0.51
SDF2-204ENST00000587338 SRP68Q9UHB9 627 aaKnown RBP11.87□□□□□ -0.51
SDF2-204ENST00000587338 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
SDF2-204ENST00000587338 ERVV-2B6SEH9 535 aa11.86□□□□□ -0.51
SDF2-204ENST00000587338 RASSF7Q02833 373 aa11.86□□□□□ -0.51
SDF2-204ENST00000587338 FKBP8Q14318 412 aa11.86□□□□□ -0.51
SDF2-204ENST00000587338 CDCA8Q53HL2 280 aa11.86□□□□□ -0.51
SDF2-204ENST00000587338 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
SDF2-204ENST00000587338 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
SDF2-204ENST00000587338 CRKLP46109 303 aaKnown RBP11.85□□□□□ -0.51
SDF2-204ENST00000587338 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
SDF2-204ENST00000587338 HSP90AB1P08238 724 aaKnown RBP11.84□□□□□ -0.51
SDF2-204ENST00000587338 CABP4P57796 275 aa11.84□□□□□ -0.51
SDF2-204ENST00000587338 EIF4A2Q14240 407 aaKnown RBP11.84□□□□□ -0.51
SDF2-204ENST00000587338 ZNF530Q6P9A1 599 aaPredicted RBP11.84□□□□□ -0.51
SDF2-204ENST00000587338 POLKQ9UBT6 870 aa11.84□□□□□ -0.51
SDF2-204ENST00000587338 KDM6AO15550 1401 aaPredicted RBP11.84□□□□□ -0.51
SDF2-204ENST00000587338 ZC3H4Q9UPT8 1303 aaKnown RBP11.84□□□□□ -0.51
SDF2-204ENST00000587338 SBF1O95248 1867 aa11.83□□□□□ -0.52
SDF2-204ENST00000587338 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.52
SDF2-204ENST00000587338 VEGFAP15692 232 aaPredicted RBP11.83□□□□□ -0.52
SDF2-204ENST00000587338 TNNT2P45379 298 aaPredicted RBP11.83□□□□□ -0.52
SDF2-204ENST00000587338 LMNB1P20700 586 aa11.82□□□□□ -0.52
SDF2-204ENST00000587338 PLEKHO1Q53GL0 409 aaPredicted RBP11.82□□□□□ -0.52
SDF2-204ENST00000587338 GLTPD2A6NH11 291 aa11.81□□□□□ -0.52
SDF2-204ENST00000587338 USPL1Q5W0Q7 1092 aa11.81□□□□□ -0.52
SDF2-204ENST00000587338 ZPR1O75312 459 aa11.8□□□□□ -0.52
SDF2-204ENST00000587338 MTHFSP49914 203 aa11.8□□□□□ -0.52
SDF2-204ENST00000587338 C1orf141Q5JVX7 400 aa11.8□□□□□ -0.52
SDF2-204ENST00000587338 CCER1Q8TC90 406 aaPredicted RBP11.8□□□□□ -0.52
SDF2-204ENST00000587338 TJP1Q07157 1748 aa11.8□□□□□ -0.52
SDF2-204ENST00000587338 TM4SF1P30408 202 aa11.79□□□□□ -0.52
SDF2-204ENST00000587338 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
SDF2-204ENST00000587338 NFATC2IPQ8NCF5 419 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms