RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 SPG7Q9UQ90 795 aa20.63■□□□□ 0.89
RANBP3-208ENST00000587263 A0A0G2JLW4 131 aa20.62■□□□□ 0.89
RANBP3-208ENST00000587263 ATP6V1AP38606 617 aa20.62■□□□□ 0.89
RANBP3-208ENST00000587263 FSTL1Q12841 308 aa20.62■□□□□ 0.89
RANBP3-208ENST00000587263 ITPK1Q13572 414 aa20.62■□□□□ 0.89
RANBP3-208ENST00000587263 COL13A1Q5TAT6 717 aaPredicted RBP20.62■□□□□ 0.89
RANBP3-208ENST00000587263 NLGN1Q8N2Q7 840 aa20.62■□□□□ 0.89
RANBP3-208ENST00000587263 N4BP2Q86UW6 1770 aaPredicted RBP20.62■□□□□ 0.89
RANBP3-208ENST00000587263 FCHSD2O94868 740 aa20.61■□□□□ 0.89
RANBP3-208ENST00000587263 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
RANBP3-208ENST00000587263 CCDC87Q9NVE4 849 aa20.6■□□□□ 0.89
RANBP3-208ENST00000587263 ST20-MTHFSA0A0A6YYL1 179 aa20.59■□□□□ 0.89
RANBP3-208ENST00000587263 TMF1P82094 1093 aa20.59■□□□□ 0.89
RANBP3-208ENST00000587263 ASAP1Q9ULH1 1129 aa20.59■□□□□ 0.89
RANBP3-208ENST00000587263 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
RANBP3-208ENST00000587263 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
RANBP3-208ENST00000587263 DPEP1P16444 411 aa20.58■□□□□ 0.89
RANBP3-208ENST00000587263 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.89
RANBP3-208ENST00000587263 C9orf131Q5VYM1 1079 aa20.58■□□□□ 0.89
RANBP3-208ENST00000587263 CAPN15O75808 1086 aa20.57■□□□□ 0.88
RANBP3-208ENST00000587263 HTRA3P83110 453 aa20.57■□□□□ 0.88
RANBP3-208ENST00000587263 TNS4Q8IZW8 715 aa20.57■□□□□ 0.88
RANBP3-208ENST00000587263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.57■□□□□ 0.882e-6■□□□□ 10
RANBP3-208ENST00000587263 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
RANBP3-208ENST00000587263 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
RANBP3-208ENST00000587263 C4AP0C0L4 1744 aa20.56■□□□□ 0.88
RANBP3-208ENST00000587263 ADRA2BP18089 450 aa20.56■□□□□ 0.88
RANBP3-208ENST00000587263 PARP3Q9Y6F1 533 aa20.55■□□□□ 0.88
RANBP3-208ENST00000587263 BRCA1P38398 1863 aaKnown RBP20.55■□□□□ 0.88
RANBP3-208ENST00000587263 IFNL2Q8IZJ0 200 aa20.54■□□□□ 0.88
RANBP3-208ENST00000587263 PCGF6Q9BYE7 350 aa20.54■□□□□ 0.88
RANBP3-208ENST00000587263 ATG3Q9NT62 314 aa20.54■□□□□ 0.88
RANBP3-208ENST00000587263 KDRP35968 1356 aa20.54■□□□□ 0.88
RANBP3-208ENST00000587263 KCPQ6ZWJ8 1503 aa20.53■□□□□ 0.88
RANBP3-208ENST00000587263 ARFGEF1Q9Y6D6 1849 aa20.53■□□□□ 0.88
RANBP3-208ENST00000587263 GYS1P13807 737 aa20.53■□□□□ 0.88
RANBP3-208ENST00000587263 PHKG2P15735 406 aa20.53■□□□□ 0.88
RANBP3-208ENST00000587263 PRELPP51888 382 aa20.53■□□□□ 0.88
RANBP3-208ENST00000587263 EMILIN1Q9Y6C2 1016 aa20.53■□□□□ 0.88
RANBP3-208ENST00000587263 RC3H1Q5TC82 1133 aaKnown RBP20.52■□□□□ 0.88
RANBP3-208ENST00000587263 ARHGEF1Q92888 912 aaKnown RBP20.52■□□□□ 0.88
RANBP3-208ENST00000587263 PIM2Q9P1W9 311 aa20.52■□□□□ 0.88
RANBP3-208ENST00000587263 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
RANBP3-208ENST00000587263 RFC4P35249 363 aa20.51■□□□□ 0.87
RANBP3-208ENST00000587263 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
RANBP3-208ENST00000587263 TNRC6CQ9HCJ0 1690 aaKnown RBP20.51■□□□□ 0.87
RANBP3-208ENST00000587263 CNTNAP4Q9C0A0 1308 aa20.51■□□□□ 0.87
RANBP3-208ENST00000587263 KCNA3P22001 575 aa20.5■□□□□ 0.87
RANBP3-208ENST00000587263 SMC1BQ8NDV3 1235 aa20.5■□□□□ 0.87
RANBP3-208ENST00000587263 DCAF5Q96JK2 942 aa20.5■□□□□ 0.87
RANBP3-208ENST00000587263 PPM1GO15355 546 aaPredicted RBP20.49■□□□□ 0.87
RANBP3-208ENST00000587263 RPS6KA4O75676 772 aa20.49■□□□□ 0.87
RANBP3-208ENST00000587263 DALRD3Q5D0E6 543 aaKnown RBP20.49■□□□□ 0.87
RANBP3-208ENST00000587263 EYA1Q99502 592 aa20.49■□□□□ 0.87
RANBP3-208ENST00000587263 RBM42Q9BTD8 480 aaKnown RBP20.49■□□□□ 0.87
RANBP3-208ENST00000587263 RRAGCQ9HB90 399 aa20.49■□□□□ 0.87
RANBP3-208ENST00000587263 ANKRD26Q9UPS8 1709 aa20.48■□□□□ 0.87
RANBP3-208ENST00000587263 WASHC2AQ641Q2 1341 aa20.48■□□□□ 0.87
RANBP3-208ENST00000587263 SLC4A9Q96Q91 983 aa20.47■□□□□ 0.87
RANBP3-208ENST00000587263 COL5A3P25940 1745 aaPredicted RBP20.47■□□□□ 0.87
RANBP3-208ENST00000587263 ERVV-2B6SEH9 535 aa20.45■□□□□ 0.86
RANBP3-208ENST00000587263 CDCA8Q53HL2 280 aa20.45■□□□□ 0.86
RANBP3-208ENST00000587263 ZC3H4Q9UPT8 1303 aaKnown RBP20.45■□□□□ 0.86
RANBP3-208ENST00000587263 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
RANBP3-208ENST00000587263 HSPA1AP0DMV8 641 aaKnown RBP20.42■□□□□ 0.86
RANBP3-208ENST00000587263 HSPA1BP0DMV9 641 aaKnown RBP20.42■□□□□ 0.86
RANBP3-208ENST00000587263 CARD14Q9BXL6 1004 aa20.41■□□□□ 0.86
RANBP3-208ENST00000587263 CHRNA5P30532 468 aa20.4■□□□□ 0.86
RANBP3-208ENST00000587263 USP42Q9H9J4 1324 aaKnown RBP20.4■□□□□ 0.86
RANBP3-208ENST00000587263 PCNTO95613 3336 aa20.39■□□□□ 0.86
RANBP3-208ENST00000587263 DDR1Q08345 913 aa20.39■□□□□ 0.85
RANBP3-208ENST00000587263 FKBP8Q14318 412 aa20.39■□□□□ 0.85
RANBP3-208ENST00000587263 SRP68Q9UHB9 627 aaKnown RBP20.39■□□□□ 0.85
RANBP3-208ENST00000587263 SBF1O95248 1867 aa20.39■□□□□ 0.85
RANBP3-208ENST00000587263 MYH14Q7Z406 1995 aaKnown RBP20.38■□□□□ 0.85
RANBP3-208ENST00000587263 VEGFAP15692 232 aaPredicted RBP20.38■□□□□ 0.85
RANBP3-208ENST00000587263 CRKLP46109 303 aaKnown RBP20.38■□□□□ 0.85
RANBP3-208ENST00000587263 CABP4P57796 275 aa20.38■□□□□ 0.85
RANBP3-208ENST00000587263 KDM6AO15550 1401 aaPredicted RBP20.37■□□□□ 0.85
RANBP3-208ENST00000587263 POLKQ9UBT6 870 aa20.37■□□□□ 0.85
RANBP3-208ENST00000587263 PTCD1O75127 700 aaKnown RBP20.36■□□□□ 0.85
RANBP3-208ENST00000587263 LMNB1P20700 586 aa20.36■□□□□ 0.85
RANBP3-208ENST00000587263 RASSF7Q02833 373 aa20.36■□□□□ 0.85
RANBP3-208ENST00000587263 EIF4A2Q14240 407 aaKnown RBP20.36■□□□□ 0.85
RANBP3-208ENST00000587263 GLTPD2A6NH11 291 aa20.35■□□□□ 0.85
RANBP3-208ENST00000587263 POLRMTO00411 1230 aaKnown RBP20.35■□□□□ 0.85
RANBP3-208ENST00000587263 PLEKHO1Q53GL0 409 aaPredicted RBP20.35■□□□□ 0.85
RANBP3-208ENST00000587263 AMOTQ4VCS5 1084 aa20.33■□□□□ 0.85
RANBP3-208ENST00000587263 ZNF530Q6P9A1 599 aaPredicted RBP20.33■□□□□ 0.85
RANBP3-208ENST00000587263 TM4SF1P30408 202 aa20.32■□□□□ 0.84
RANBP3-208ENST00000587263 ZPR1O75312 459 aa20.31■□□□□ 0.84
RANBP3-208ENST00000587263 TJP1Q07157 1748 aa20.3■□□□□ 0.84
RANBP3-208ENST00000587263 MTHFSP49914 203 aa20.3■□□□□ 0.84
RANBP3-208ENST00000587263 TIAM2Q8IVF5 1701 aa20.3■□□□□ 0.84
RANBP3-208ENST00000587263 C1orf141Q5JVX7 400 aa20.29■□□□□ 0.84
RANBP3-208ENST00000587263 ADAMTS7Q9UKP4 1686 aa20.29■□□□□ 0.84
RANBP3-208ENST00000587263 USPL1Q5W0Q7 1092 aa20.28■□□□□ 0.84
RANBP3-208ENST00000587263 INTS5Q6P9B9 1019 aaKnown RBP20.28■□□□□ 0.84
RANBP3-208ENST00000587263 TTLL6Q8N841 843 aa20.28■□□□□ 0.84
RANBP3-208ENST00000587263 NFATC2IPQ8NCF5 419 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms