RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
ZNF540-203ENST00000586134 RALBP1Q15311 655 aa12.37□□□□□ -0.43
ZNF540-203ENST00000586134 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
ZNF540-203ENST00000586134 FAM208AQ9UK61 1670 aaKnown RBP12.36□□□□□ -0.43
ZNF540-203ENST00000586134 A0A1W2PP64 1363 aa12.36□□□□□ -0.43
ZNF540-203ENST00000586134 USP47Q96K76 1375 aa12.36□□□□□ -0.43
ZNF540-203ENST00000586134 PHF14O94880 888 aa12.36□□□□□ -0.43
ZNF540-203ENST00000586134 MCCP23508 829 aa12.36□□□□□ -0.43
ZNF540-203ENST00000586134 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
ZNF540-203ENST00000586134 ANTXR1Q9H6X2 564 aa12.36□□□□□ -0.43
ZNF540-203ENST00000586134 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 CCDC66A2RUB6 948 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 MCM5P33992 734 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 LARP1Q6PKG0 1096 aaKnown RBP12.35□□□□□ -0.43
ZNF540-203ENST00000586134 RGPD3A6NKT7 1758 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-203ENST00000586134 RGPD4Q7Z3J3 1758 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 LRRC37A3O60309 1634 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 WDR17Q8IZU2 1322 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 CDCA8Q53HL2 280 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 TICAM2Q86XR7 235 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 CEP120Q8N960 986 aa12.35□□□□□ -0.43
ZNF540-203ENST00000586134 CDCA7Q9BWT1 371 aaPredicted RBP12.35□□□□□ -0.43
ZNF540-203ENST00000586134 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
ZNF540-203ENST00000586134 ANKRD36BQ8N2N9 1353 aa12.34□□□□□ -0.43
ZNF540-203ENST00000586134 A0A0G2JS52 829 aa12.34□□□□□ -0.43
ZNF540-203ENST00000586134 TRAK2O60296 914 aa12.34□□□□□ -0.43
ZNF540-203ENST00000586134 C8orf34Q49A92 452 aa12.34□□□□□ -0.43
ZNF540-203ENST00000586134 ZRANB1Q9UGI0 708 aa12.34□□□□□ -0.43
ZNF540-203ENST00000586134 BCL9O00512 1426 aa12.34□□□□□ -0.43
ZNF540-203ENST00000586134 PARD3Q8TEW0 1356 aa12.34□□□□□ -0.43
ZNF540-203ENST00000586134 BAG6P46379 1132 aa12.33□□□□□ -0.43
ZNF540-203ENST00000586134 TMF1P82094 1093 aa12.33□□□□□ -0.43
ZNF540-203ENST00000586134 CCDC184Q52MB2 194 aa12.33□□□□□ -0.43
ZNF540-203ENST00000586134 SLC12A5Q9H2X9 1139 aa12.33□□□□□ -0.43
ZNF540-203ENST00000586134 DDX11L8A8MPP1 907 aa12.33□□□□□ -0.44
ZNF540-203ENST00000586134 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
ZNF540-203ENST00000586134 TMC1Q8TDI8 760 aa12.33□□□□□ -0.44
ZNF540-203ENST00000586134 EFCC1Q9HA90 598 aa12.33□□□□□ -0.44
ZNF540-203ENST00000586134 CCDC7Q96M83 1385 aa12.32□□□□□ -0.44
ZNF540-203ENST00000586134 RREB1Q92766 1687 aa12.32□□□□□ -0.44
ZNF540-203ENST00000586134 CARD10Q9BWT7 1032 aa12.32□□□□□ -0.44
ZNF540-203ENST00000586134 MYOM1P52179 1685 aa12.32□□□□□ -0.44
ZNF540-203ENST00000586134 KIF20BQ96Q89 1820 aa12.32□□□□□ -0.44
ZNF540-203ENST00000586134 E9PSI1 815 aa12.32□□□□□ -0.44
ZNF540-203ENST00000586134 SOX12O15370 315 aa12.32□□□□□ -0.44
ZNF540-203ENST00000586134 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
ZNF540-203ENST00000586134 PDE3BQ13370 1112 aa12.31□□□□□ -0.44
ZNF540-203ENST00000586134 OVOS2A0A0G2JMS6 1433 aa12.3□□□□□ -0.44
ZNF540-203ENST00000586134 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
ZNF540-203ENST00000586134 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
ZNF540-203ENST00000586134 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
ZNF540-203ENST00000586134 KCNJ4P48050 445 aa12.3□□□□□ -0.44
ZNF540-203ENST00000586134 GABPB1Q06547 395 aaPredicted RBP12.3□□□□□ -0.44
ZNF540-203ENST00000586134 NME9Q86XW9 330 aa12.3□□□□□ -0.44
ZNF540-203ENST00000586134 TIGD1Q96MW7 591 aa12.3□□□□□ -0.44
ZNF540-203ENST00000586134 KIF3AQ9Y496 699 aa12.3□□□□□ -0.44
ZNF540-203ENST00000586134 LRP5O75197 1615 aa12.29□□□□□ -0.44
ZNF540-203ENST00000586134 TULP2O00295 520 aa12.29□□□□□ -0.44
ZNF540-203ENST00000586134 TOM1L2Q6ZVM7 507 aa12.29□□□□□ -0.44
ZNF540-203ENST00000586134 CENPQQ7L2Z9 268 aaPredicted RBP12.29□□□□□ -0.44
ZNF540-203ENST00000586134 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.29□□□□□ -0.44
ZNF540-203ENST00000586134 PATL2C9JE40 543 aaKnown RBP12.28□□□□□ -0.44
ZNF540-203ENST00000586134 ZBTB22O15209 634 aa12.28□□□□□ -0.44
ZNF540-203ENST00000586134 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
ZNF540-203ENST00000586134 CBX1P83916 185 aa12.28□□□□□ -0.44
ZNF540-203ENST00000586134 DEFB132Q7Z7B7 95 aa12.28□□□□□ -0.44
ZNF540-203ENST00000586134 ERBB3P21860 1342 aa12.28□□□□□ -0.44
ZNF540-203ENST00000586134 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
ZNF540-203ENST00000586134 RTL1A6NKG5 1358 aa12.27□□□□□ -0.44
ZNF540-203ENST00000586134 SKOR2Q2VWA4 1001 aaPredicted RBP12.27□□□□□ -0.44
ZNF540-203ENST00000586134 ZNF771Q7L3S4 317 aaPredicted RBP12.27□□□□□ -0.44
ZNF540-203ENST00000586134 MYRIPQ8NFW9 859 aa12.27□□□□□ -0.44
ZNF540-203ENST00000586134 GZF1Q9H116 711 aaPredicted RBP12.27□□□□□ -0.44
ZNF540-203ENST00000586134 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.27□□□□□ -0.44
ZNF540-203ENST00000586134 NUP188Q5SRE5 1749 aa12.27□□□□□ -0.45
ZNF540-203ENST00000586134 GTF2F1P35269 517 aaKnown RBP eCLIP12.27□□□□□ -0.45
ZNF540-203ENST00000586134 HMGN5P82970 282 aaKnown RBP12.27□□□□□ -0.45
ZNF540-203ENST00000586134 DDB1Q16531 1140 aa12.27□□□□□ -0.45
ZNF540-203ENST00000586134 TNS2Q63HR2 1409 aa12.26□□□□□ -0.45
ZNF540-203ENST00000586134 KDM2BQ8NHM5 1336 aa12.26□□□□□ -0.45
ZNF540-203ENST00000586134 KIF24Q5T7B8 1368 aa12.26□□□□□ -0.45
ZNF540-203ENST00000586134 IP6K1Q92551 441 aa12.26□□□□□ -0.45
ZNF540-203ENST00000586134 COG3Q96JB2 828 aa12.26□□□□□ -0.45
ZNF540-203ENST00000586134 PRIMPOLQ96LW4 560 aa12.26□□□□□ -0.45
ZNF540-203ENST00000586134 FEZ1Q99689 392 aa12.26□□□□□ -0.45
ZNF540-203ENST00000586134 RCAN3Q9UKA8 241 aa12.26□□□□□ -0.45
ZNF540-203ENST00000586134 ZBTB7CA1YPR0 619 aa12.25□□□□□ -0.45
ZNF540-203ENST00000586134 CLSTN1O94985 981 aa12.25□□□□□ -0.45
ZNF540-203ENST00000586134 HMGB1P09429 215 aaKnown RBP12.25□□□□□ -0.45
ZNF540-203ENST00000586134 RBM25P49756 843 aaKnown RBP12.25□□□□□ -0.45
ZNF540-203ENST00000586134 CAMKK2Q96RR4 588 aa12.25□□□□□ -0.45
ZNF540-203ENST00000586134 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
ZNF540-203ENST00000586134 ANKRD26Q9UPS8 1709 aa12.24□□□□□ -0.45
ZNF540-203ENST00000586134 NHSQ6T4R5 1651 aa12.24□□□□□ -0.45
ZNF540-203ENST00000586134 CSB-PGBD3P0DP91 1061 aa12.24□□□□□ -0.45
ZNF540-203ENST00000586134 CHMP5Q9NZZ3 219 aa12.24□□□□□ -0.45
ZNF540-203ENST00000586134 IBTKQ9P2D0 1353 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms