RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 MAP2P11137 1827 aaKnown RBP14.31□□□□□ -0.12
GGA3-219ENST00000584550 KIF13BQ9NQT8 1826 aa14.3□□□□□ -0.12
GGA3-219ENST00000584550 FYB1O15117 783 aa14.3□□□□□ -0.12
GGA3-219ENST00000584550 RRAGCQ9HB90 399 aa14.3□□□□□ -0.12
GGA3-219ENST00000584550 PRELPP51888 382 aa14.29□□□□□ -0.12
GGA3-219ENST00000584550 TMF1P82094 1093 aa14.29□□□□□ -0.12
GGA3-219ENST00000584550 TRAPPC3LQ5T215 181 aa14.29□□□□□ -0.12
GGA3-219ENST00000584550 PUS7Q96PZ0 661 aaKnown RBP14.29□□□□□ -0.12
GGA3-219ENST00000584550 TMOD3Q9NYL9 352 aa14.29□□□□□ -0.12
GGA3-219ENST00000584550 INSRP06213 1382 aa14.28□□□□□ -0.12
GGA3-219ENST00000584550 FSTL1Q12841 308 aa14.28□□□□□ -0.12
GGA3-219ENST00000584550 KCPQ6ZWJ8 1503 aa14.28□□□□□ -0.12
GGA3-219ENST00000584550 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.13
GGA3-219ENST00000584550 NLGN1Q8N2Q7 840 aa14.27□□□□□ -0.13
GGA3-219ENST00000584550 CCDC87Q9NVE4 849 aa14.27□□□□□ -0.13
GGA3-219ENST00000584550 RTCBQ9Y3I0 505 aaKnown RBP14.27□□□□□ -0.13
GGA3-219ENST00000584550 TONSLQ96HA7 1378 aa14.26□□□□□ -0.13
GGA3-219ENST00000584550 ST20-MTHFSA0A0A6YYL1 179 aa14.26□□□□□ -0.13
GGA3-219ENST00000584550 PPM1GO15355 546 aaPredicted RBP14.26□□□□□ -0.13
GGA3-219ENST00000584550 KCNA3P22001 575 aa14.26□□□□□ -0.13
GGA3-219ENST00000584550 ARHGEF1Q92888 912 aaKnown RBP14.26□□□□□ -0.13
GGA3-219ENST00000584550 TESK2Q96S53 571 aa14.26□□□□□ -0.13
GGA3-219ENST00000584550 ATG3Q9NT62 314 aa14.26□□□□□ -0.13
GGA3-219ENST00000584550 RNF181Q9P0P0 153 aa14.26□□□□□ -0.13
GGA3-219ENST00000584550 SPG7Q9UQ90 795 aa14.26□□□□□ -0.13
GGA3-219ENST00000584550 PARP3Q9Y6F1 533 aa14.26□□□□□ -0.13
GGA3-219ENST00000584550 C10orf71Q711Q0 1435 aa14.25□□□□□ -0.13
GGA3-219ENST00000584550 FLT4P35916 1363 aa14.25□□□□□ -0.13
GGA3-219ENST00000584550 KDM2BQ8NHM5 1336 aa14.25□□□□□ -0.13
GGA3-219ENST00000584550 PKD1L3Q7Z443 1732 aa14.25□□□□□ -0.13
GGA3-219ENST00000584550 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
GGA3-219ENST00000584550 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
GGA3-219ENST00000584550 EMILIN1Q9Y6C2 1016 aa14.25□□□□□ -0.13
GGA3-219ENST00000584550 BRCA1P38398 1863 aaKnown RBP14.25□□□□□ -0.13
GGA3-219ENST00000584550 RFC4P35249 363 aa14.24□□□□□ -0.13
GGA3-219ENST00000584550 PIM2Q9P1W9 311 aa14.24□□□□□ -0.13
GGA3-219ENST00000584550 C4AP0C0L4 1744 aa14.24□□□□□ -0.13
GGA3-219ENST00000584550 PLEKHG2Q9H7P9 1386 aa14.23□□□□□ -0.13
GGA3-219ENST00000584550 GYS1P13807 737 aa14.23□□□□□ -0.13
GGA3-219ENST00000584550 SLC4A9Q96Q91 983 aa14.23□□□□□ -0.13
GGA3-219ENST00000584550 HSPA1AP0DMV8 641 aaKnown RBP14.22□□□□□ -0.13
GGA3-219ENST00000584550 HSPA1BP0DMV9 641 aaKnown RBP14.22□□□□□ -0.13
GGA3-219ENST00000584550 DALRD3Q5D0E6 543 aaKnown RBP14.22□□□□□ -0.13
GGA3-219ENST00000584550 SMC1BQ8NDV3 1235 aa14.22□□□□□ -0.13
GGA3-219ENST00000584550 ARFGEF1Q9Y6D6 1849 aa14.22□□□□□ -0.13
GGA3-219ENST00000584550 PHKG2P15735 406 aa14.21□□□□□ -0.13
GGA3-219ENST00000584550 CHRNA5P30532 468 aa14.21□□□□□ -0.13
GGA3-219ENST00000584550 IFNL2Q8IZJ0 200 aa14.21□□□□□ -0.13
GGA3-219ENST00000584550 DCAF5Q96JK2 942 aa14.21□□□□□ -0.13
GGA3-219ENST00000584550 KIF20BQ96Q89 1820 aa14.2□□□□□ -0.14
GGA3-219ENST00000584550 EYA1Q99502 592 aa14.2□□□□□ -0.14
GGA3-219ENST00000584550 SBF1O95248 1867 aa14.19□□□□□ -0.14
GGA3-219ENST00000584550 RPS6KA4O75676 772 aa14.19□□□□□ -0.14
GGA3-219ENST00000584550 SRP68Q9UHB9 627 aaKnown RBP14.19□□□□□ -0.14
GGA3-219ENST00000584550 TNRC6CQ9HCJ0 1690 aaKnown RBP14.18□□□□□ -0.14
GGA3-219ENST00000584550 ADRA2BP18089 450 aa14.18□□□□□ -0.14
GGA3-219ENST00000584550 RASSF7Q02833 373 aa14.18□□□□□ -0.14
GGA3-219ENST00000584550 FKBP8Q14318 412 aa14.18□□□□□ -0.14
GGA3-219ENST00000584550 KDRP35968 1356 aa14.18□□□□□ -0.14
GGA3-219ENST00000584550 KIF24Q5T7B8 1368 aa14.18□□□□□ -0.14
GGA3-219ENST00000584550 DDR1Q08345 913 aa14.17□□□□□ -0.14
GGA3-219ENST00000584550 RC3H1Q5TC82 1133 aaKnown RBP14.17□□□□□ -0.14
GGA3-219ENST00000584550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.17□□□□□ -0.14
GGA3-219ENST00000584550 COL5A3P25940 1745 aaPredicted RBP14.16□□□□□ -0.14
GGA3-219ENST00000584550 CARD14Q9BXL6 1004 aa14.16□□□□□ -0.14
GGA3-219ENST00000584550 MYH14Q7Z406 1995 aaKnown RBP14.16□□□□□ -0.14
GGA3-219ENST00000584550 CNTNAP4Q9C0A0 1308 aa14.15□□□□□ -0.14
GGA3-219ENST00000584550 NCAPD2Q15021 1401 aa14.15□□□□□ -0.14
GGA3-219ENST00000584550 PTCD1O75127 700 aaKnown RBP14.15□□□□□ -0.14
GGA3-219ENST00000584550 VEGFAP15692 232 aaPredicted RBP14.15□□□□□ -0.14
GGA3-219ENST00000584550 WASHC2AQ641Q2 1341 aa14.15□□□□□ -0.15
GGA3-219ENST00000584550 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.15
GGA3-219ENST00000584550 SLC24A1O60721 1099 aa14.14□□□□□ -0.15
GGA3-219ENST00000584550 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
GGA3-219ENST00000584550 CRKLP46109 303 aaKnown RBP14.13□□□□□ -0.15
GGA3-219ENST00000584550 CABP4P57796 275 aa14.13□□□□□ -0.15
GGA3-219ENST00000584550 GLTPD2A6NH11 291 aa14.12□□□□□ -0.15
GGA3-219ENST00000584550 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
GGA3-219ENST00000584550 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
GGA3-219ENST00000584550 ZNF831Q5JPB2 1677 aa14.11□□□□□ -0.15
GGA3-219ENST00000584550 POLRMTO00411 1230 aaKnown RBP14.11□□□□□ -0.15
GGA3-219ENST00000584550 LMNB1P20700 586 aa14.11□□□□□ -0.15
GGA3-219ENST00000584550 EIF4A2Q14240 407 aaKnown RBP14.11□□□□□ -0.15
GGA3-219ENST00000584550 CCDC88AQ3V6T2 1871 aa14.11□□□□□ -0.15
GGA3-219ENST00000584550 MKRN1Q9UHC7 482 aaKnown RBP14.11□□□□□ -0.15
GGA3-219ENST00000584550 TM4SF1P30408 202 aa14.1□□□□□ -0.15
GGA3-219ENST00000584550 USPL1Q5W0Q7 1092 aa14.1□□□□□ -0.15
GGA3-219ENST00000584550 POLKQ9UBT6 870 aa14.1□□□□□ -0.15
GGA3-219ENST00000584550 NFATC2IPQ8NCF5 419 aa14.09□□□□□ -0.15
GGA3-219ENST00000584550 ANKRD26Q9UPS8 1709 aa14.09□□□□□ -0.15
GGA3-219ENST00000584550 KDM6AO15550 1401 aaPredicted RBP14.08□□□□□ -0.15
GGA3-219ENST00000584550 POTECB2RU33 542 aa14.08□□□□□ -0.16
GGA3-219ENST00000584550 ZPR1O75312 459 aa14.08□□□□□ -0.16
GGA3-219ENST00000584550 HSP90AB1P08238 724 aaKnown RBP14.08□□□□□ -0.16
GGA3-219ENST00000584550 MTHFSP49914 203 aa14.08□□□□□ -0.16
GGA3-219ENST00000584550 ZNF530Q6P9A1 599 aaPredicted RBP14.08□□□□□ -0.16
GGA3-219ENST00000584550 INTS5Q6P9B9 1019 aaKnown RBP14.08□□□□□ -0.16
GGA3-219ENST00000584550 TIMELESSQ9UNS1 1208 aa14.08□□□□□ -0.16
GGA3-219ENST00000584550 ZC3H4Q9UPT8 1303 aaKnown RBP14.08□□□□□ -0.16
GGA3-219ENST00000584550 TIAM2Q8IVF5 1701 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms