RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FCHSD2O94868 740 aa17.09■□□□□ 0.33
TOP3A-215ENST00000583328 PHKG2P15735 406 aa17.09■□□□□ 0.33
TOP3A-215ENST00000583328 DNAJC5GQ8N7S2 189 aa17.09■□□□□ 0.33
TOP3A-215ENST00000583328 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
TOP3A-215ENST00000583328 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
TOP3A-215ENST00000583328 TOGARAM1Q9Y4F4 1720 aa17.08■□□□□ 0.32
TOP3A-215ENST00000583328 PXDNLA1KZ92 1463 aa17.08■□□□□ 0.32
TOP3A-215ENST00000583328 WASHC2AQ641Q2 1341 aa17.08■□□□□ 0.32
TOP3A-215ENST00000583328 DPEP1P16444 411 aa17.08■□□□□ 0.32
TOP3A-215ENST00000583328 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
TOP3A-215ENST00000583328 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.32
TOP3A-215ENST00000583328 UBR3Q6ZT12 1888 aa17.07■□□□□ 0.32
TOP3A-215ENST00000583328 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
TOP3A-215ENST00000583328 ARHGEF1Q92888 912 aaKnown RBP17.07■□□□□ 0.32
TOP3A-215ENST00000583328 ITGB4P16144 1822 aa17.06■□□□□ 0.32
TOP3A-215ENST00000583328 RFC4P35249 363 aa17.06■□□□□ 0.32
TOP3A-215ENST00000583328 PARP3Q9Y6F1 533 aa17.06■□□□□ 0.32
TOP3A-215ENST00000583328 NCAPD2Q15021 1401 aa17.05■□□□□ 0.32
TOP3A-215ENST00000583328 ADRA2BP18089 450 aa17.05■□□□□ 0.32
TOP3A-215ENST00000583328 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
TOP3A-215ENST00000583328 C9orf131Q5VYM1 1079 aa17.05■□□□□ 0.32
TOP3A-215ENST00000583328 GYS1P13807 737 aa17.04■□□□□ 0.32
TOP3A-215ENST00000583328 RBM46Q8TBY0 533 aaKnown RBP17.04■□□□□ 0.32
TOP3A-215ENST00000583328 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
TOP3A-215ENST00000583328 MAP2P11137 1827 aaKnown RBP17.03■□□□□ 0.32
TOP3A-215ENST00000583328 ERVV-2B6SEH9 535 aa17.03■□□□□ 0.32
TOP3A-215ENST00000583328 RPS6KA4O75676 772 aa17.03■□□□□ 0.32
TOP3A-215ENST00000583328 SLC4A9Q96Q91 983 aa17.03■□□□□ 0.32
TOP3A-215ENST00000583328 POLKQ9UBT6 870 aa17.03■□□□□ 0.32
TOP3A-215ENST00000583328 PKD1L3Q7Z443 1732 aa17.03■□□□□ 0.32
TOP3A-215ENST00000583328 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
TOP3A-215ENST00000583328 PIM2Q9P1W9 311 aa17.02■□□□□ 0.32
TOP3A-215ENST00000583328 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
TOP3A-215ENST00000583328 KCNA3P22001 575 aa17.01■□□□□ 0.31
TOP3A-215ENST00000583328 HTRA3P83110 453 aa17.01■□□□□ 0.31
TOP3A-215ENST00000583328 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
TOP3A-215ENST00000583328 CNTNAP4Q9C0A0 1308 aa17■□□□□ 0.31
TOP3A-215ENST00000583328 FSTL1Q12841 308 aa17■□□□□ 0.31
TOP3A-215ENST00000583328 KLRG1Q96E93 195 aa17■□□□□ 0.31
TOP3A-215ENST00000583328 DCAF5Q96JK2 942 aa17■□□□□ 0.31
TOP3A-215ENST00000583328 KDRP35968 1356 aa17■□□□□ 0.31
TOP3A-215ENST00000583328 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
TOP3A-215ENST00000583328 CABP4P57796 275 aa16.99■□□□□ 0.31
TOP3A-215ENST00000583328 PLEKHO1Q53GL0 409 aaPredicted RBP16.99■□□□□ 0.31
TOP3A-215ENST00000583328 DALRD3Q5D0E6 543 aaKnown RBP16.99■□□□□ 0.31
TOP3A-215ENST00000583328 KDM2BQ8NHM5 1336 aa16.98■□□□□ 0.31
TOP3A-215ENST00000583328 KIF20BQ96Q89 1820 aa16.98■□□□□ 0.31
TOP3A-215ENST00000583328 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
TOP3A-215ENST00000583328 RNF181Q9P0P0 153 aa16.98■□□□□ 0.31
TOP3A-215ENST00000583328 PLEKHG2Q9H7P9 1386 aa16.98■□□□□ 0.31
TOP3A-215ENST00000583328 PTCD1O75127 700 aaKnown RBP16.97■□□□□ 0.31
TOP3A-215ENST00000583328 PCGF6Q9BYE7 350 aa16.97■□□□□ 0.31
TOP3A-215ENST00000583328 SRP68Q9UHB9 627 aaKnown RBP16.97■□□□□ 0.31
TOP3A-215ENST00000583328 N4BP2Q86UW6 1770 aaPredicted RBP16.97■□□□□ 0.31
TOP3A-215ENST00000583328 COL13A1Q5TAT6 717 aaPredicted RBP16.96■□□□□ 0.31
TOP3A-215ENST00000583328 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
TOP3A-215ENST00000583328 JMYQ8N9B5 988 aa16.96■□□□□ 0.31
TOP3A-215ENST00000583328 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
TOP3A-215ENST00000583328 FKBP8Q14318 412 aa16.95■□□□□ 0.3
TOP3A-215ENST00000583328 AMOTQ4VCS5 1084 aa16.95■□□□□ 0.3
TOP3A-215ENST00000583328 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
TOP3A-215ENST00000583328 KIF13BQ9NQT8 1826 aa16.95■□□□□ 0.3
TOP3A-215ENST00000583328 CHRNA5P30532 468 aa16.94■□□□□ 0.3
TOP3A-215ENST00000583328 MTHFSP49914 203 aa16.94■□□□□ 0.3
TOP3A-215ENST00000583328 KIAA1551Q9HCM1 1747 aa16.93■□□□□ 0.3
TOP3A-215ENST00000583328 KCPQ6ZWJ8 1503 aa16.93■□□□□ 0.3
TOP3A-215ENST00000583328 CAPN15O75808 1086 aa16.93■□□□□ 0.3
TOP3A-215ENST00000583328 DDR1Q08345 913 aa16.93■□□□□ 0.3
TOP3A-215ENST00000583328 C1orf141Q5JVX7 400 aa16.93■□□□□ 0.3
TOP3A-215ENST00000583328 USP42Q9H9J4 1324 aaKnown RBP16.93■□□□□ 0.3
TOP3A-215ENST00000583328 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
TOP3A-215ENST00000583328 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
TOP3A-215ENST00000583328 SMC1BQ8NDV3 1235 aa16.92■□□□□ 0.3
TOP3A-215ENST00000583328 TNS4Q8IZW8 715 aa16.91■□□□□ 0.3
TOP3A-215ENST00000583328 KDM6AO15550 1401 aaPredicted RBP16.9■□□□□ 0.3
TOP3A-215ENST00000583328 ZPR1O75312 459 aa16.9■□□□□ 0.3
TOP3A-215ENST00000583328 POLRMTO00411 1230 aaKnown RBP16.89■□□□□ 0.29
TOP3A-215ENST00000583328 TM4SF1P30408 202 aa16.89■□□□□ 0.29
TOP3A-215ENST00000583328 WDR90Q96KV7 1748 aa16.88■□□□□ 0.29
TOP3A-215ENST00000583328 RASSF7Q02833 373 aa16.88■□□□□ 0.29
TOP3A-215ENST00000583328 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
TOP3A-215ENST00000583328 INTS5Q6P9B9 1019 aaKnown RBP16.88■□□□□ 0.29
TOP3A-215ENST00000583328 AEBP1Q8IUX7 1158 aa16.87■□□□□ 0.29
TOP3A-215ENST00000583328 ANKRD26Q9UPS8 1709 aa16.87■□□□□ 0.29
TOP3A-215ENST00000583328 ZNF831Q5JPB2 1677 aa16.86■□□□□ 0.29
TOP3A-215ENST00000583328 VEGFAP15692 232 aaPredicted RBP16.86■□□□□ 0.29
TOP3A-215ENST00000583328 DNAJC10Q8IXB1 793 aa16.86■□□□□ 0.29
TOP3A-215ENST00000583328 GLTPD2A6NH11 291 aa16.85■□□□□ 0.29
TOP3A-215ENST00000583328 LMNB1P20700 586 aa16.85■□□□□ 0.29
TOP3A-215ENST00000583328 PRELPP51888 382 aa16.85■□□□□ 0.29
TOP3A-215ENST00000583328 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
TOP3A-215ENST00000583328 ZC3H4Q9UPT8 1303 aaKnown RBP16.85■□□□□ 0.29
TOP3A-215ENST00000583328 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
TOP3A-215ENST00000583328 NFIXQ14938 502 aa16.84■□□□□ 0.29
TOP3A-215ENST00000583328 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
TOP3A-215ENST00000583328 BRCA1P38398 1863 aaKnown RBP16.84■□□□□ 0.29
TOP3A-215ENST00000583328 HSPA1AP0DMV8 641 aaKnown RBP16.83■□□□□ 0.28
TOP3A-215ENST00000583328 HSPA1BP0DMV9 641 aaKnown RBP16.83■□□□□ 0.28
TOP3A-215ENST00000583328 COL5A3P25940 1745 aaPredicted RBP16.83■□□□□ 0.28
TOP3A-215ENST00000583328 SOS1Q07889 1333 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms