RNA–Protein interactions for RNA: ENST00000582402.1

CDC6-205, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 353 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-205ENST00000582402 CCDC7Q96M83 1385 aa6.31□□□□□ -1.4
CDC6-205ENST00000582402 MKI67P46013 3256 aaKnown RBP6.31□□□□□ -1.4
CDC6-205ENST00000582402 ADAMTSL1Q8N6G6 1762 aa6.31□□□□□ -1.4
CDC6-205ENST00000582402 LMNB1P20700 586 aa6.31□□□□□ -1.4
CDC6-205ENST00000582402 RGL3Q3MIN7 710 aa6.31□□□□□ -1.4
CDC6-205ENST00000582402 NLRP13Q86W25 1043 aa6.31□□□□□ -1.4
CDC6-205ENST00000582402 LDHDQ86WU2 507 aa6.31□□□□□ -1.4
CDC6-205ENST00000582402 FLAD1Q8NFF5 587 aa6.31□□□□□ -1.4
CDC6-205ENST00000582402 HPS5Q9UPZ3 1129 aa6.31□□□□□ -1.4
CDC6-205ENST00000582402 PIK3C2GO75747 1445 aa6.31□□□□□ -1.4
CDC6-205ENST00000582402 DICER1Q9UPY3 1922 aaKnown RBP6.31□□□□□ -1.4
CDC6-205ENST00000582402 UNC80Q8N2C7 3258 aa6.3□□□□□ -1.4
CDC6-205ENST00000582402 ZC3H4Q9UPT8 1303 aaKnown RBP6.3□□□□□ -1.4
CDC6-205ENST00000582402 IL2RBP14784 551 aa6.3□□□□□ -1.4
CDC6-205ENST00000582402 CIAPIN1Q6FI81 312 aa6.3□□□□□ -1.4
CDC6-205ENST00000582402 DPY19L2Q6NUT2 758 aa6.3□□□□□ -1.4
CDC6-205ENST00000582402 CCDC24Q8N4L8 307 aa6.3□□□□□ -1.4
CDC6-205ENST00000582402 CCDC87Q9NVE4 849 aa6.3□□□□□ -1.4
CDC6-205ENST00000582402 NLRP2Q9NX02 1062 aa6.3□□□□□ -1.4
CDC6-205ENST00000582402 PAPPA2Q9BXP8 1791 aa6.3□□□□□ -1.4
CDC6-205ENST00000582402 RPGRIP1LQ68CZ1 1315 aa6.29□□□□□ -1.4
CDC6-205ENST00000582402 CUL9Q8IWT3 2517 aa6.29□□□□□ -1.4
CDC6-205ENST00000582402 WASLO00401 505 aaPredicted RBP6.29□□□□□ -1.4
CDC6-205ENST00000582402 ECE1P42892 770 aa6.29□□□□□ -1.4
CDC6-205ENST00000582402 CACNA1SQ13698 1873 aa6.29□□□□□ -1.4
CDC6-205ENST00000582402 NUDT16Q96DE0 195 aaKnown RBP6.29□□□□□ -1.4
CDC6-205ENST00000582402 TRPM7Q96QT4 1865 aa6.29□□□□□ -1.4
CDC6-205ENST00000582402 PRDM6Q9NQX0 595 aa6.29□□□□□ -1.4
CDC6-205ENST00000582402 EIF3AQ14152 1382 aaKnown RBP6.29□□□□□ -1.4
CDC6-205ENST00000582402 SCN4AP35499 1836 aa6.28□□□□□ -1.4
CDC6-205ENST00000582402 NLRP6P59044 892 aa6.28□□□□□ -1.4
CDC6-205ENST00000582402 CFAP70Q5T0N1 1121 aa6.28□□□□□ -1.4
CDC6-205ENST00000582402 ZIC5Q96T25 663 aa6.28□□□□□ -1.4
CDC6-205ENST00000582402 TRAK1Q9UPV9 953 aa6.28□□□□□ -1.4
CDC6-205ENST00000582402 LTN1O94822 1766 aa6.28□□□□□ -1.4
CDC6-205ENST00000582402 PALLDQ8WX93 1383 aa6.28□□□□□ -1.4
CDC6-205ENST00000582402 DLEC1Q9Y238 1755 aa6.27□□□□□ -1.41
CDC6-205ENST00000582402 NFKBIEO00221 500 aa6.27□□□□□ -1.41
CDC6-205ENST00000582402 GNPATO15228 680 aa6.27□□□□□ -1.41
CDC6-205ENST00000582402 ERFEQ4G0M1 354 aa6.27□□□□□ -1.41
CDC6-205ENST00000582402 CHRDL2Q6WN34 429 aa6.27□□□□□ -1.41
CDC6-205ENST00000582402 CNTROBQ8N137 903 aa6.27□□□□□ -1.41
CDC6-205ENST00000582402 SNX27Q96L92 541 aa6.27□□□□□ -1.41
CDC6-205ENST00000582402 TAF1DQ9H5J8 278 aaPredicted RBP6.27□□□□□ -1.41
CDC6-205ENST00000582402 RGPD2P0DJD1 1756 aa6.26□□□□□ -1.41
CDC6-205ENST00000582402 POTEFA5A3E0 1075 aa6.26□□□□□ -1.41
CDC6-205ENST00000582402 TRAF5O00463 557 aa6.26□□□□□ -1.41
CDC6-205ENST00000582402 PLA2G5P39877 138 aa6.26□□□□□ -1.41
CDC6-205ENST00000582402 PPARGC1BQ86YN6 1023 aaKnown RBP6.26□□□□□ -1.41
CDC6-205ENST00000582402 LINC00116Q8NCU8 138 aa6.26□□□□□ -1.41
CDC6-205ENST00000582402 SIRT1Q96EB6 747 aa6.26□□□□□ -1.41
CDC6-205ENST00000582402 DDX21Q9NR30 783 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDC6-205ENST00000582402 PARP3Q9Y6F1 533 aa6.26□□□□□ -1.41
CDC6-205ENST00000582402 POLR3AO14802 1390 aaPredicted RBP6.26□□□□□ -1.41
CDC6-205ENST00000582402 ITGB4P16144 1822 aa6.25□□□□□ -1.41
CDC6-205ENST00000582402 CA12O43570 354 aa6.25□□□□□ -1.41
CDC6-205ENST00000582402 NBPF1Q3BBV0 1214 aa6.25□□□□□ -1.41
CDC6-205ENST00000582402 FAM122AQ96E09 287 aa6.25□□□□□ -1.41
CDC6-205ENST00000582402 SSFA2P28290 1259 aa6.24□□□□□ -1.41
CDC6-205ENST00000582402 ITGAEP38570 1179 aa6.24□□□□□ -1.41
CDC6-205ENST00000582402 BRPF1P55201 1214 aaPredicted RBP6.24□□□□□ -1.41
CDC6-205ENST00000582402 CTU1Q7Z7A3 348 aaKnown RBP6.24□□□□□ -1.41
CDC6-205ENST00000582402 ARHGEF25Q86VW2 580 aa6.24□□□□□ -1.41
CDC6-205ENST00000582402 RBM27Q9P2N5 1060 aaKnown RBP6.24□□□□□ -1.41
CDC6-205ENST00000582402 NSD3Q9BZ95 1437 aa6.24□□□□□ -1.41
CDC6-205ENST00000582402 FER1L6Q2WGJ9 1857 aa6.24□□□□□ -1.41
CDC6-205ENST00000582402 RNF123Q5XPI4 1314 aa6.24□□□□□ -1.41
CDC6-205ENST00000582402 MAP2P11137 1827 aaKnown RBP6.23□□□□□ -1.41
CDC6-205ENST00000582402 H0YGN5 161 aa6.23□□□□□ -1.41
CDC6-205ENST00000582402 SOX1O00570 391 aaPredicted RBP6.23□□□□□ -1.41
CDC6-205ENST00000582402 MAP2K2P36507 400 aa6.23□□□□□ -1.41
CDC6-205ENST00000582402 CST9Q5W186 159 aa6.23□□□□□ -1.41
CDC6-205ENST00000582402 SYNE4Q8N205 404 aa6.23□□□□□ -1.41
CDC6-205ENST00000582402 LRCH3Q96II8 777 aa6.23□□□□□ -1.41
CDC6-205ENST00000582402 TLL2Q9Y6L7 1015 aa6.23□□□□□ -1.41
CDC6-205ENST00000582402 NFAT5O94916 1531 aa6.23□□□□□ -1.41
CDC6-205ENST00000582402 TRIOBPQ9H2D6 2365 aa6.23□□□□□ -1.41
CDC6-205ENST00000582402 AKAP11Q9UKA4 1901 aa6.23□□□□□ -1.41
CDC6-205ENST00000582402 AFDNP55196 1824 aaKnown RBP6.22□□□□□ -1.41
CDC6-205ENST00000582402 VCANP13611 3396 aa6.22□□□□□ -1.41
CDC6-205ENST00000582402 IQCA1LA6NCM1 817 aa6.22□□□□□ -1.41
CDC6-205ENST00000582402 TRPA1O75762 1119 aa6.22□□□□□ -1.41
CDC6-205ENST00000582402 EPHX2P34913 555 aa6.22□□□□□ -1.41
CDC6-205ENST00000582402 TMF1P82094 1093 aa6.22□□□□□ -1.41
CDC6-205ENST00000582402 MPRIPQ6WCQ1 1025 aa6.22□□□□□ -1.41
CDC6-205ENST00000582402 OTUD5Q96G74 571 aa6.22□□□□□ -1.41
CDC6-205ENST00000582402 ZNF408Q9H9D4 720 aa6.22□□□□□ -1.41
CDC6-205ENST00000582402 ZNF541Q9H0D2 1346 aa6.22□□□□□ -1.41
CDC6-205ENST00000582402 ROCK1Q13464 1354 aa6.21□□□□□ -1.41
CDC6-205ENST00000582402 HOXD11P31277 338 aaPredicted RBP6.21□□□□□ -1.42
CDC6-205ENST00000582402 DDR1Q08345 913 aa6.21□□□□□ -1.42
CDC6-205ENST00000582402 Q7L0L9 218 aa6.21□□□□□ -1.42
CDC6-205ENST00000582402 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDC6-205ENST00000582402 ANKRD24Q8TF21 1146 aa6.21□□□□□ -1.42
CDC6-205ENST00000582402 LTV1Q96GA3 475 aaPredicted RBP6.21□□□□□ -1.42
CDC6-205ENST00000582402 CDK19Q9BWU1 502 aa6.21□□□□□ -1.42
CDC6-205ENST00000582402 RBBP6Q7Z6E9 1792 aaKnown RBP6.21□□□□□ -1.42
CDC6-205ENST00000582402 FAM208AQ9UK61 1670 aaKnown RBP6.2□□□□□ -1.42
CDC6-205ENST00000582402 COL11A2P13942 1736 aaPredicted RBP6.2□□□□□ -1.42
CDC6-205ENST00000582402 ADGRB1O14514 1584 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms