RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 C16orf71Q8IYS4 520 aaPredicted RBP20.6■□□□□ 0.89
IFT20-211ENST00000580991 NLGN1Q8N2Q7 840 aa20.6■□□□□ 0.89
IFT20-211ENST00000580991 TMOD3Q9NYL9 352 aa20.6■□□□□ 0.89
IFT20-211ENST00000580991 SPG7Q9UQ90 795 aa20.6■□□□□ 0.89
IFT20-211ENST00000580991 ST20-MTHFSA0A0A6YYL1 179 aa20.59■□□□□ 0.89
IFT20-211ENST00000580991 JMYQ8N9B5 988 aa20.59■□□□□ 0.89
IFT20-211ENST00000580991 FSTL1Q12841 308 aa20.58■□□□□ 0.89
IFT20-211ENST00000580991 ASAP1Q9ULH1 1129 aa20.58■□□□□ 0.89
IFT20-211ENST00000580991 C10orf71Q711Q0 1435 aa20.58■□□□□ 0.88
IFT20-211ENST00000580991 FCHSD2O94868 740 aa20.57■□□□□ 0.88
IFT20-211ENST00000580991 TMF1P82094 1093 aa20.57■□□□□ 0.88
IFT20-211ENST00000580991 TRAPPC3LQ5T215 181 aa20.57■□□□□ 0.88
IFT20-211ENST00000580991 PLEKHG2Q9H7P9 1386 aa20.57■□□□□ 0.88
IFT20-211ENST00000580991 CCDC87Q9NVE4 849 aa20.56■□□□□ 0.88
IFT20-211ENST00000580991 RTCBQ9Y3I0 505 aaKnown RBP20.56■□□□□ 0.88
IFT20-211ENST00000580991 NCAPD2Q15021 1401 aa20.55■□□□□ 0.88
IFT20-211ENST00000580991 DPEP1P16444 411 aa20.55■□□□□ 0.88
IFT20-211ENST00000580991 HTRA3P83110 453 aa20.55■□□□□ 0.88
IFT20-211ENST00000580991 C9orf131Q5VYM1 1079 aa20.55■□□□□ 0.88
IFT20-211ENST00000580991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.55■□□□□ 0.88
IFT20-211ENST00000580991 BRCA1P38398 1863 aaKnown RBP20.54■□□□□ 0.88
IFT20-211ENST00000580991 KDM2BQ8NHM5 1336 aa20.53■□□□□ 0.88
IFT20-211ENST00000580991 KIF20BQ96Q89 1820 aa20.53■□□□□ 0.88
IFT20-211ENST00000580991 CAPN15O75808 1086 aa20.53■□□□□ 0.88
IFT20-211ENST00000580991 ADRA2BP18089 450 aa20.53■□□□□ 0.88
IFT20-211ENST00000580991 ATG3Q9NT62 314 aa20.53■□□□□ 0.88
IFT20-211ENST00000580991 IFNL2Q8IZJ0 200 aa20.52■□□□□ 0.88
IFT20-211ENST00000580991 TNS4Q8IZW8 715 aa20.52■□□□□ 0.88
IFT20-211ENST00000580991 EMILIN1Q9Y6C2 1016 aa20.52■□□□□ 0.88
IFT20-211ENST00000580991 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
IFT20-211ENST00000580991 ARFGEF1Q9Y6D6 1849 aa20.52■□□□□ 0.88
IFT20-211ENST00000580991 C4AP0C0L4 1744 aa20.52■□□□□ 0.88
IFT20-211ENST00000580991 TONSLQ96HA7 1378 aa20.51■□□□□ 0.87
IFT20-211ENST00000580991 ARHGEF1Q92888 912 aaKnown RBP20.51■□□□□ 0.87
IFT20-211ENST00000580991 GYS1P13807 737 aa20.5■□□□□ 0.87
IFT20-211ENST00000580991 PHKG2P15735 406 aa20.5■□□□□ 0.87
IFT20-211ENST00000580991 PRELPP51888 382 aa20.5■□□□□ 0.87
IFT20-211ENST00000580991 PIM2Q9P1W9 311 aa20.5■□□□□ 0.87
IFT20-211ENST00000580991 KDRP35968 1356 aa20.49■□□□□ 0.87
IFT20-211ENST00000580991 KCPQ6ZWJ8 1503 aa20.49■□□□□ 0.87
IFT20-211ENST00000580991 KCNA3P22001 575 aa20.49■□□□□ 0.87
IFT20-211ENST00000580991 RFC4P35249 363 aa20.49■□□□□ 0.87
IFT20-211ENST00000580991 RC3H1Q5TC82 1133 aaKnown RBP20.49■□□□□ 0.87
IFT20-211ENST00000580991 PPM1GO15355 546 aaPredicted RBP20.48■□□□□ 0.87
IFT20-211ENST00000580991 ZNF831Q5JPB2 1677 aa20.48■□□□□ 0.87
IFT20-211ENST00000580991 DALRD3Q5D0E6 543 aaKnown RBP20.47■□□□□ 0.87
IFT20-211ENST00000580991 DCAF5Q96JK2 942 aa20.47■□□□□ 0.87
IFT20-211ENST00000580991 EYA1Q99502 592 aa20.47■□□□□ 0.87
IFT20-211ENST00000580991 RRAGCQ9HB90 399 aa20.47■□□□□ 0.87
IFT20-211ENST00000580991 RNF181Q9P0P0 153 aa20.47■□□□□ 0.87
IFT20-211ENST00000580991 CNTNAP4Q9C0A0 1308 aa20.47■□□□□ 0.87
IFT20-211ENST00000580991 RPS6KA4O75676 772 aa20.46■□□□□ 0.87
IFT20-211ENST00000580991 SMC1BQ8NDV3 1235 aa20.46■□□□□ 0.87
IFT20-211ENST00000580991 SLC4A9Q96Q91 983 aa20.46■□□□□ 0.87
IFT20-211ENST00000580991 RBM42Q9BTD8 480 aaKnown RBP20.46■□□□□ 0.87
IFT20-211ENST00000580991 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
IFT20-211ENST00000580991 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.86
IFT20-211ENST00000580991 COL5A3P25940 1745 aaPredicted RBP20.44■□□□□ 0.86
IFT20-211ENST00000580991 ERVV-2B6SEH9 535 aa20.44■□□□□ 0.86
IFT20-211ENST00000580991 ANKRD26Q9UPS8 1709 aa20.44■□□□□ 0.86
IFT20-211ENST00000580991 SBF1O95248 1867 aa20.43■□□□□ 0.86
IFT20-211ENST00000580991 CDCA8Q53HL2 280 aa20.42■□□□□ 0.86
IFT20-211ENST00000580991 MYH14Q7Z406 1995 aaKnown RBP20.41■□□□□ 0.86
IFT20-211ENST00000580991 CARD14Q9BXL6 1004 aa20.4■□□□□ 0.86
IFT20-211ENST00000580991 ZC3H4Q9UPT8 1303 aaKnown RBP20.4■□□□□ 0.86
IFT20-211ENST00000580991 HSP90AB1P08238 724 aaKnown RBP20.39■□□□□ 0.85
IFT20-211ENST00000580991 HSPA1AP0DMV8 641 aaKnown RBP20.37■□□□□ 0.85
IFT20-211ENST00000580991 HSPA1BP0DMV9 641 aaKnown RBP20.37■□□□□ 0.85
IFT20-211ENST00000580991 CHRNA5P30532 468 aa20.37■□□□□ 0.85
IFT20-211ENST00000580991 DDR1Q08345 913 aa20.37■□□□□ 0.85
IFT20-211ENST00000580991 FKBP8Q14318 412 aa20.37■□□□□ 0.85
IFT20-211ENST00000580991 USP42Q9H9J4 1324 aaKnown RBP20.36■□□□□ 0.85
IFT20-211ENST00000580991 VEGFAP15692 232 aaPredicted RBP20.36■□□□□ 0.85
IFT20-211ENST00000580991 SRP68Q9UHB9 627 aaKnown RBP20.36■□□□□ 0.85
IFT20-211ENST00000580991 CRKLP46109 303 aaKnown RBP20.35■□□□□ 0.85
IFT20-211ENST00000580991 CABP4P57796 275 aa20.35■□□□□ 0.85
IFT20-211ENST00000580991 POLKQ9UBT6 870 aa20.35■□□□□ 0.85
IFT20-211ENST00000580991 EIF4A2Q14240 407 aaKnown RBP20.34■□□□□ 0.85
IFT20-211ENST00000580991 KDM6AO15550 1401 aaPredicted RBP20.34■□□□□ 0.85
IFT20-211ENST00000580991 GLTPD2A6NH11 291 aa20.33■□□□□ 0.85
IFT20-211ENST00000580991 PTCD1O75127 700 aaKnown RBP20.33■□□□□ 0.85
IFT20-211ENST00000580991 LMNB1P20700 586 aa20.33■□□□□ 0.85
IFT20-211ENST00000580991 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
IFT20-211ENST00000580991 RASSF7Q02833 373 aa20.32■□□□□ 0.84
IFT20-211ENST00000580991 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
IFT20-211ENST00000580991 TM4SF1P30408 202 aa20.31■□□□□ 0.84
IFT20-211ENST00000580991 ZNF530Q6P9A1 599 aaPredicted RBP20.3■□□□□ 0.84
IFT20-211ENST00000580991 ZPR1O75312 459 aa20.29■□□□□ 0.84
IFT20-211ENST00000580991 MTHFSP49914 203 aa20.29■□□□□ 0.84
IFT20-211ENST00000580991 AMOTQ4VCS5 1084 aa20.29■□□□□ 0.84
IFT20-211ENST00000580991 NFATC2IPQ8NCF5 419 aa20.28■□□□□ 0.84
IFT20-211ENST00000580991 TJP1Q07157 1748 aa20.27■□□□□ 0.83
IFT20-211ENST00000580991 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
IFT20-211ENST00000580991 USPL1Q5W0Q7 1092 aa20.26■□□□□ 0.83
IFT20-211ENST00000580991 INTS5Q6P9B9 1019 aaKnown RBP20.26■□□□□ 0.83
IFT20-211ENST00000580991 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
IFT20-211ENST00000580991 ADAMTS7Q9UKP4 1686 aa20.26■□□□□ 0.83
IFT20-211ENST00000580991 TNNT2P45379 298 aaPredicted RBP20.25■□□□□ 0.83
IFT20-211ENST00000580991 TTLL6Q8N841 843 aa20.25■□□□□ 0.83
IFT20-211ENST00000580991 TIAM2Q8IVF5 1701 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms