RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 RBM19Q9Y4C8 960 aaKnown RBP7.24□□□□□ -1.25
CDH8-206ENST00000580044 HNRNPUQ00839 825 aaKnown RBP eCLIP7.23□□□□□ -1.25
CDH8-206ENST00000580044 PTSQ03393 145 aa7.23□□□□□ -1.25
CDH8-206ENST00000580044 SH3D19Q5HYK7 790 aa7.23□□□□□ -1.25
CDH8-206ENST00000580044 POLMQ9NP87 494 aaPredicted RBP7.23□□□□□ -1.25
CDH8-206ENST00000580044 WASHC2AQ641Q2 1341 aa7.23□□□□□ -1.25
CDH8-206ENST00000580044 MRC2Q9UBG0 1479 aa7.23□□□□□ -1.25
CDH8-206ENST00000580044 CDK13Q14004 1512 aaKnown RBP7.22□□□□□ -1.25
CDH8-206ENST00000580044 CCDC7Q96M83 1385 aa7.22□□□□□ -1.25
CDH8-206ENST00000580044 SPINT1O43278 529 aa7.22□□□□□ -1.25
CDH8-206ENST00000580044 HSPA5P11021 654 aaKnown RBP7.22□□□□□ -1.25
CDH8-206ENST00000580044 NR6A1Q15406 480 aa7.22□□□□□ -1.25
CDH8-206ENST00000580044 Q6ZVU0 165 aa7.22□□□□□ -1.25
CDH8-206ENST00000580044 ADGRL2O95490 1459 aa7.22□□□□□ -1.25
CDH8-206ENST00000580044 ARID4BQ4LE39 1312 aaPredicted RBP7.22□□□□□ -1.25
CDH8-206ENST00000580044 ZBED9Q6R2W3 1325 aa7.22□□□□□ -1.25
CDH8-206ENST00000580044 KIAA0586Q9BVV6 1533 aa7.22□□□□□ -1.25
CDH8-206ENST00000580044 RELBQ01201 579 aa7.21□□□□□ -1.26
CDH8-206ENST00000580044 CBLBQ13191 982 aa7.21□□□□□ -1.26
CDH8-206ENST00000580044 SV2AQ7L0J3 742 aa7.21□□□□□ -1.26
CDH8-206ENST00000580044 LRRN4Q8WUT4 740 aa7.21□□□□□ -1.26
CDH8-206ENST00000580044 MPHOSPH9Q99550 1183 aa7.21□□□□□ -1.26
CDH8-206ENST00000580044 HIRIP3Q9BW71 556 aaPredicted RBP7.21□□□□□ -1.26
CDH8-206ENST00000580044 ESF1Q9H501 851 aaKnown RBP7.21□□□□□ -1.26
CDH8-206ENST00000580044 PPP4R2Q9NY27 417 aa7.21□□□□□ -1.26
CDH8-206ENST00000580044 IFT140Q96RY7 1462 aa7.21□□□□□ -1.26
CDH8-206ENST00000580044 MBD5Q9P267 1494 aa7.21□□□□□ -1.26
CDH8-206ENST00000580044 ARHGEF12Q9NZN5 1544 aa7.21□□□□□ -1.26
CDH8-206ENST00000580044 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 SHANK2Q9UPX8 1470 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 CDC14CA4D256 554 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 RAB15P59190 212 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 CCDC155Q8N6L0 562 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 ZNF592Q92610 1267 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 CNTNAP3BQ96NU0 1288 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 CNTNAP3Q9BZ76 1288 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 KDM4CQ9H3R0 1056 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 KDM5CP41229 1560 aa7.2□□□□□ -1.26
CDH8-206ENST00000580044 ROCK2O75116 1388 aaKnown RBP7.2□□□□□ -1.26
CDH8-206ENST00000580044 ABCC5O15440 1437 aa7.19□□□□□ -1.26
CDH8-206ENST00000580044 SPATA31E1Q6ZUB1 1445 aa7.19□□□□□ -1.26
CDH8-206ENST00000580044 PPP2R2DQ66LE6 453 aa7.19□□□□□ -1.26
CDH8-206ENST00000580044 ERICH6Q7L0X2 663 aa7.19□□□□□ -1.26
CDH8-206ENST00000580044 ADAM32Q8TC27 787 aa7.19□□□□□ -1.26
CDH8-206ENST00000580044 RRP7BPQ9NSQ0 103 aa7.19□□□□□ -1.26
CDH8-206ENST00000580044 KTN1Q86UP2 1357 aaKnown RBP7.19□□□□□ -1.26
CDH8-206ENST00000580044 NUP153P49790 1475 aaKnown RBP7.18□□□□□ -1.26
CDH8-206ENST00000580044 CAMSAP2Q08AD1 1489 aa7.18□□□□□ -1.26
CDH8-206ENST00000580044 KDM5DQ9BY66 1539 aa7.18□□□□□ -1.26
CDH8-206ENST00000580044 INTS6LQ5JSJ4 861 aaKnown RBP7.18□□□□□ -1.26
CDH8-206ENST00000580044 FOXR1Q6PIV2 292 aa7.18□□□□□ -1.26
CDH8-206ENST00000580044 CCDC125Q86Z20 511 aa7.18□□□□□ -1.26
CDH8-206ENST00000580044 SVOPQ8N4V2 548 aa7.18□□□□□ -1.26
CDH8-206ENST00000580044 NANOS1Q8WY41 292 aaKnown RBP7.18□□□□□ -1.26
CDH8-206ENST00000580044 COL25A1Q9BXS0 654 aaPredicted RBP7.18□□□□□ -1.26
CDH8-206ENST00000580044 PRKRIP1Q9H875 184 aaPredicted RBP7.18□□□□□ -1.26
CDH8-206ENST00000580044 E9PCH4 1651 aa7.18□□□□□ -1.26
CDH8-206ENST00000580044 TROQ12816 1431 aaPredicted RBP7.18□□□□□ -1.26
CDH8-206ENST00000580044 SMG6Q86US8 1419 aaKnown RBP7.18□□□□□ -1.26
CDH8-206ENST00000580044 DISP1Q96F81 1524 aa7.17□□□□□ -1.26
CDH8-206ENST00000580044 EIF4G3O43432 1585 aaKnown RBP7.17□□□□□ -1.26
CDH8-206ENST00000580044 LORP23490 312 aaPredicted RBP7.17□□□□□ -1.26
CDH8-206ENST00000580044 MARSP56192 900 aaKnown RBP7.17□□□□□ -1.26
CDH8-206ENST00000580044 TMEM151AQ8N4L1 468 aa7.17□□□□□ -1.26
CDH8-206ENST00000580044 PROCA1Q8NCQ7 364 aaPredicted RBP7.17□□□□□ -1.26
CDH8-206ENST00000580044 L3MBTL2Q969R5 705 aa7.17□□□□□ -1.26
CDH8-206ENST00000580044 PCMTD1Q96MG8 357 aaPredicted RBP7.17□□□□□ -1.26
CDH8-206ENST00000580044 INSM2Q96T92 566 aaPredicted RBP7.17□□□□□ -1.26
CDH8-206ENST00000580044 KIAA1107Q9UPP5 1409 aa7.17□□□□□ -1.26
CDH8-206ENST00000580044 PZPP20742 1482 aa7.17□□□□□ -1.26
CDH8-206ENST00000580044 GRIN2AQ12879 1464 aa7.17□□□□□ -1.26
CDH8-206ENST00000580044 RALGAPBQ86X10 1494 aa7.17□□□□□ -1.26
CDH8-206ENST00000580044 CDC42BPAQ5VT25 1732 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 ITGA6P23229 1130 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 MAP3K10Q02779 954 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 KCNMA1Q12791 1236 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 SEPT12Q8IYM1 358 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 VWA5B2Q8N398 1253 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 AGBL1Q96MI9 1066 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.16□□□□□ -1.26
CDH8-206ENST00000580044 ZNF395Q9H8N7 513 aaPredicted RBP7.16□□□□□ -1.26
CDH8-206ENST00000580044 MRS2Q9HD23 443 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 ENAMQ9NRM1 1142 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 ZNF330Q9Y3S2 320 aaPredicted RBP7.16□□□□□ -1.26
CDH8-206ENST00000580044 UHRF1BP1Q6BDS2 1440 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 MAGI1Q96QZ7 1491 aaPredicted RBP7.16□□□□□ -1.26
CDH8-206ENST00000580044 LAMC1P11047 1609 aa7.16□□□□□ -1.26
CDH8-206ENST00000580044 SLC35F4A4IF30 521 aa7.15□□□□□ -1.26
CDH8-206ENST00000580044 ADH1AP07327 375 aa7.15□□□□□ -1.26
CDH8-206ENST00000580044 TMEM259Q4ZIN3 620 aa7.15□□□□□ -1.26
CDH8-206ENST00000580044 ANKRD30AQ9BXX3 1397 aa7.15□□□□□ -1.26
CDH8-206ENST00000580044 ARHGEF5Q12774 1597 aa7.15□□□□□ -1.27
CDH8-206ENST00000580044 BCORL1Q5H9F3 1711 aa7.15□□□□□ -1.27
CDH8-206ENST00000580044 GDF11O95390 407 aa7.14□□□□□ -1.27
CDH8-206ENST00000580044 USP17L8P0C7I0 530 aa7.14□□□□□ -1.27
CDH8-206ENST00000580044 CTSOP43234 321 aaPredicted RBP7.14□□□□□ -1.27
CDH8-206ENST00000580044 KIF7Q2M1P5 1343 aa7.14□□□□□ -1.27
CDH8-206ENST00000580044 CEP170Q5SW79 1584 aa7.14□□□□□ -1.27
CDH8-206ENST00000580044 RNF20Q5VTR2 975 aa7.14□□□□□ -1.27
CDH8-206ENST00000580044 LYSMD3Q7Z3D4 306 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms