RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 COL24A1Q17RW2 1714 aa12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 GNPATO15228 680 aa12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ITPK1Q13572 414 aa12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 CC2D1BQ5T0F9 858 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 SSFA2P28290 1259 aa12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 MTHFSP49914 203 aa12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 CABP4P57796 275 aa12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 PLEKHG2Q9H7P9 1386 aa12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
CDK5RAP3-211ENST00000578996 ZNF784Q8NCA9 323 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-211ENST00000578996 KDM6AO15550 1401 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-211ENST00000578996 IL13P35225 146 aa12.5□□□□□ -0.41
CDK5RAP3-211ENST00000578996 UBR3Q6ZT12 1888 aa12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 HMOX1P09601 288 aa12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 GOLGB1Q14789 3259 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 KDRP35968 1356 aa12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 CD2APQ9Y5K6 639 aa12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 GRIN3BO60391 1043 aa12.47□□□□□ -0.41
CDK5RAP3-211ENST00000578996 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
CDK5RAP3-211ENST00000578996 SLC4A9Q96Q91 983 aa12.47□□□□□ -0.41
CDK5RAP3-211ENST00000578996 PER1O15534 1290 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-211ENST00000578996 DIAPH1O60610 1272 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-211ENST00000578996 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
CDK5RAP3-211ENST00000578996 CHD4Q14839 1912 aa12.45□□□□□ -0.42
CDK5RAP3-211ENST00000578996 MMP10P09238 476 aa12.45□□□□□ -0.42
CDK5RAP3-211ENST00000578996 RFC4P35249 363 aa12.45□□□□□ -0.42
CDK5RAP3-211ENST00000578996 CNTNAP4Q9C0A0 1308 aa12.44□□□□□ -0.42
CDK5RAP3-211ENST00000578996 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-211ENST00000578996 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-211ENST00000578996 RPS6KA4O75676 772 aa12.43□□□□□ -0.42
CDK5RAP3-211ENST00000578996 RC3H1Q5TC82 1133 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-211ENST00000578996 SLC52A2Q9HAB3 445 aa12.43□□□□□ -0.42
CDK5RAP3-211ENST00000578996 LGR6Q9HBX8 967 aa12.43□□□□□ -0.42
CDK5RAP3-211ENST00000578996 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 RNMTO43148 476 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 ADRA2BP18089 450 aa12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 CRKLP46109 303 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 MTHFSDQ2M296 383 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 ZNF831Q5JPB2 1677 aa12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 CICQ96RK0 1608 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-211ENST00000578996 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
CDK5RAP3-211ENST00000578996 SCN11AQ9UI33 1791 aa12.41□□□□□ -0.42
CDK5RAP3-211ENST00000578996 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 GYS1P13807 737 aa12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 DNAJC10Q8IXB1 793 aa12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 TJP1Q07157 1748 aa12.4□□□□□ -0.43
CDK5RAP3-211ENST00000578996 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
CDK5RAP3-211ENST00000578996 COL3A1P02461 1466 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-211ENST00000578996 C4AP0C0L4 1744 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 SENP3-EIF4A1A0A087X0R7 540 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 C1QTNF8P60827 252 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ZNF526Q8TF50 670 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 CFAP53Q96M91 514 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 PXDNLA1KZ92 1463 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 MRC1P22897 1456 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 A0A0G2JLW4 131 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 TEFQ10587 303 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 INTS5Q6P9B9 1019 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 TTC5Q8N0Z6 440 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 GAS2L2Q8NHY3 880 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 C10orf71Q711Q0 1435 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ZPR1O75312 459 aa12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 TGFB2P61812 414 aa12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 FKBP8Q14318 412 aa12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 KCPQ6ZWJ8 1503 aa12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 MYH14Q7Z406 1995 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 GNAT3A8MTJ3 354 aa12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 CYP19A1P11511 503 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 DPEP1P16444 411 aa12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 N4BP2Q86UW6 1770 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 COL15A1P39059 1388 aa12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 FCHSD2O94868 740 aa12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 PRKAR2BP31323 418 aa12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ADAMTS7Q9UKP4 1686 aa12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 U2AF1L5P0DN76 240 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 PPP2R1AP30153 589 aa12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 U2AF1Q01081 240 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 DDR1Q08345 913 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms