RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 COL24A1Q17RW2 1714 aa12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 GNPATO15228 680 aa12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ITPK1Q13572 414 aa12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 CC2D1BQ5T0F9 858 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
CDK5RAP3-211ENST00000578996 SSFA2P28290 1259 aa12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 MTHFSP49914 203 aa12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 CABP4P57796 275 aa12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 PLEKHG2Q9H7P9 1386 aa12.52□□□□□ -0.41
CDK5RAP3-211ENST00000578996 ERVV-2B6SEH9 535 aa12.51□□□□□ -0.41
CDK5RAP3-211ENST00000578996 ZNF784Q8NCA9 323 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-211ENST00000578996 KDM6AO15550 1401 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-211ENST00000578996 IL13P35225 146 aa12.5□□□□□ -0.41
CDK5RAP3-211ENST00000578996 UBR3Q6ZT12 1888 aa12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 HMOX1P09601 288 aa12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 GOLGB1Q14789 3259 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-211ENST00000578996 KDRP35968 1356 aa12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 CD2APQ9Y5K6 639 aa12.48□□□□□ -0.41
CDK5RAP3-211ENST00000578996 GRIN3BO60391 1043 aa12.47□□□□□ -0.41
CDK5RAP3-211ENST00000578996 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
CDK5RAP3-211ENST00000578996 SLC4A9Q96Q91 983 aa12.47□□□□□ -0.41
CDK5RAP3-211ENST00000578996 PER1O15534 1290 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-211ENST00000578996 DIAPH1O60610 1272 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-211ENST00000578996 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
CDK5RAP3-211ENST00000578996 CHD4Q14839 1912 aa12.45□□□□□ -0.42
CDK5RAP3-211ENST00000578996 MMP10P09238 476 aa12.45□□□□□ -0.42
CDK5RAP3-211ENST00000578996 RFC4P35249 363 aa12.45□□□□□ -0.42
CDK5RAP3-211ENST00000578996 CNTNAP4Q9C0A0 1308 aa12.44□□□□□ -0.42
CDK5RAP3-211ENST00000578996 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-211ENST00000578996 ARHGEF1Q92888 912 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-211ENST00000578996 RPS6KA4O75676 772 aa12.43□□□□□ -0.42
CDK5RAP3-211ENST00000578996 RC3H1Q5TC82 1133 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-211ENST00000578996 SLC52A2Q9HAB3 445 aa12.43□□□□□ -0.42
CDK5RAP3-211ENST00000578996 LGR6Q9HBX8 967 aa12.43□□□□□ -0.42
CDK5RAP3-211ENST00000578996 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 RNMTO43148 476 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 ADRA2BP18089 450 aa12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 CRKLP46109 303 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 MTHFSDQ2M296 383 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 ZNF831Q5JPB2 1677 aa12.42□□□□□ -0.42
CDK5RAP3-211ENST00000578996 CICQ96RK0 1608 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-211ENST00000578996 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
CDK5RAP3-211ENST00000578996 SCN11AQ9UI33 1791 aa12.41□□□□□ -0.42
CDK5RAP3-211ENST00000578996 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 GYS1P13807 737 aa12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 DNAJC10Q8IXB1 793 aa12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
CDK5RAP3-211ENST00000578996 TJP1Q07157 1748 aa12.4□□□□□ -0.43
CDK5RAP3-211ENST00000578996 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
CDK5RAP3-211ENST00000578996 COL3A1P02461 1466 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-211ENST00000578996 C4AP0C0L4 1744 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 SENP3-EIF4A1A0A087X0R7 540 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 C1QTNF8P60827 252 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ZNF526Q8TF50 670 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 CFAP53Q96M91 514 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 PXDNLA1KZ92 1463 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 MRC1P22897 1456 aa12.38□□□□□ -0.43
CDK5RAP3-211ENST00000578996 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 A0A0G2JLW4 131 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 TEFQ10587 303 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 INTS5Q6P9B9 1019 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 TTC5Q8N0Z6 440 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 GAS2L2Q8NHY3 880 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 C10orf71Q711Q0 1435 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ZPR1O75312 459 aa12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 TGFB2P61812 414 aa12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 FKBP8Q14318 412 aa12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 KCPQ6ZWJ8 1503 aa12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 MYH14Q7Z406 1995 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-211ENST00000578996 GNAT3A8MTJ3 354 aa12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 CYP19A1P11511 503 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 DPEP1P16444 411 aa12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 N4BP2Q86UW6 1770 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-211ENST00000578996 COL15A1P39059 1388 aa12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 FCHSD2O94868 740 aa12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 PRKAR2BP31323 418 aa12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-211ENST00000578996 ADAMTS7Q9UKP4 1686 aa12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 U2AF1L5P0DN76 240 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 PPP2R1AP30153 589 aa12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 U2AF1Q01081 240 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 DDR1Q08345 913 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms