RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 SNRPNP63162 240 aaKnown RBP6□□□□□ -1.45
PTPRM-209ENST00000578698 POU4F2Q12837 409 aa6□□□□□ -1.45
PTPRM-209ENST00000578698 EPS8L1Q8TE68 723 aa6□□□□□ -1.45
PTPRM-209ENST00000578698 OXCT2Q9BYC2 517 aaPredicted RBP6□□□□□ -1.45
PTPRM-209ENST00000578698 GDPD2Q9HCC8 539 aa6□□□□□ -1.45
PTPRM-209ENST00000578698 KRBA1A5PL33 1030 aa5.99□□□□□ -1.45
PTPRM-209ENST00000578698 ESPNB1AK53 854 aa5.99□□□□□ -1.45
PTPRM-209ENST00000578698 USP17L8P0C7I0 530 aa5.99□□□□□ -1.45
PTPRM-209ENST00000578698 GPC1P35052 558 aa5.99□□□□□ -1.45
PTPRM-209ENST00000578698 NLRP3Q96P20 1036 aa5.99□□□□□ -1.45
PTPRM-209ENST00000578698 NUCKS1Q9H1E3 243 aaKnown RBP5.99□□□□□ -1.45
PTPRM-209ENST00000578698 LRRC4BQ9NT99 713 aa5.99□□□□□ -1.45
PTPRM-209ENST00000578698 MKL2Q9ULH7 1088 aa5.99□□□□□ -1.45
PTPRM-209ENST00000578698 A0A1W2PRU2 124 aa5.98□□□□□ -1.45
PTPRM-209ENST00000578698 MAP2K3P46734 347 aa5.98□□□□□ -1.45
PTPRM-209ENST00000578698 SEPT12Q8IYM1 358 aa5.98□□□□□ -1.45
PTPRM-209ENST00000578698 KRTAP4-8Q9BYQ9 185 aa5.98□□□□□ -1.45
PTPRM-209ENST00000578698 TBC1D2BQ9UPU7 963 aa5.98□□□□□ -1.45
PTPRM-209ENST00000578698 GRIN2CQ14957 1233 aa5.97□□□□□ -1.45
PTPRM-209ENST00000578698 NBPF10Q6P3W6 841 aaKnown RBP5.97□□□□□ -1.45
PTPRM-209ENST00000578698 NBPF15Q8N660 670 aa5.97□□□□□ -1.45
PTPRM-209ENST00000578698 TIMMDC1Q9NPL8 285 aa5.97□□□□□ -1.45
PTPRM-209ENST00000578698 SHISA8B8ZZ34 492 aa5.96□□□□□ -1.46
PTPRM-209ENST00000578698 AMPD1P23109 780 aa5.96□□□□□ -1.46
PTPRM-209ENST00000578698 HMX1Q9NP08 348 aaPredicted RBP5.96□□□□□ -1.46
PTPRM-209ENST00000578698 NDUFB9Q9Y6M9 179 aa5.96□□□□□ -1.46
PTPRM-209ENST00000578698 GIGYF1O75420 1035 aaPredicted RBP5.95□□□□□ -1.46
PTPRM-209ENST00000578698 ALYREFQ86V81 257 aaKnown RBP5.95□□□□□ -1.46
PTPRM-209ENST00000578698 GLMNQ92990 594 aa5.95□□□□□ -1.46
PTPRM-209ENST00000578698 CALR3Q96L12 384 aaKnown RBP5.95□□□□□ -1.46
PTPRM-209ENST00000578698 PSMG3-AS1Q96PY0 264 aa5.95□□□□□ -1.46
PTPRM-209ENST00000578698 GPAMQ9HCL2 828 aa5.95□□□□□ -1.46
PTPRM-209ENST00000578698 PCDHB9Q9Y5E1 797 aa5.95□□□□□ -1.46
PTPRM-209ENST00000578698 WASLO00401 505 aaPredicted RBP5.94□□□□□ -1.46
PTPRM-209ENST00000578698 F11P03951 625 aa5.94□□□□□ -1.46
PTPRM-209ENST00000578698 COL8A1P27658 744 aa5.94□□□□□ -1.46
PTPRM-209ENST00000578698 CC2D2BQ6DHV5 1058 aa5.94□□□□□ -1.46
PTPRM-209ENST00000578698 TAS1R3Q7RTX0 852 aa5.94□□□□□ -1.46
PTPRM-209ENST00000578698 CYP2U1Q7Z449 544 aa5.94□□□□□ -1.46
PTPRM-209ENST00000578698 PHF24Q9UPV7 400 aa5.94□□□□□ -1.46
PTPRM-209ENST00000578698 EDARADDQ8WWZ3 215 aa5.93□□□□□ -1.46
PTPRM-209ENST00000578698 KLRG1Q96E93 195 aa5.93□□□□□ -1.46
PTPRM-209ENST00000578698 GRIP2Q9C0E4 1043 aa5.93□□□□□ -1.46
PTPRM-209ENST00000578698 ESF1Q9H501 851 aaKnown RBP5.93□□□□□ -1.46
PTPRM-209ENST00000578698 ARHGEF10LQ9HCE6 1279 aa5.93□□□□□ -1.46
PTPRM-209ENST00000578698 GDF2Q9UK05 429 aaPredicted RBP5.93□□□□□ -1.46
PTPRM-209ENST00000578698 POM121CA8CG34 1229 aa5.92□□□□□ -1.46
PTPRM-209ENST00000578698 SPATA31C2B4DYI2 1134 aa5.92□□□□□ -1.46
PTPRM-209ENST00000578698 ERVK-9P63128 1117 aa5.92□□□□□ -1.46
PTPRM-209ENST00000578698 CLN3Q13286 438 aa5.92□□□□□ -1.46
PTPRM-209ENST00000578698 C1orf229Q6ZS94 237 aaPredicted RBP5.92□□□□□ -1.46
PTPRM-209ENST00000578698 AEBP1Q8IUX7 1158 aa5.92□□□□□ -1.46
PTPRM-209ENST00000578698 GJD4Q96KN9 370 aaPredicted RBP5.92□□□□□ -1.46
PTPRM-209ENST00000578698 CFHR5Q9BXR6 569 aa5.92□□□□□ -1.46
PTPRM-209ENST00000578698 SUV39H2Q9H5I1 410 aa5.92□□□□□ -1.46
PTPRM-209ENST00000578698 PHKA2P46019 1235 aa5.91□□□□□ -1.46
PTPRM-209ENST00000578698 WDR44Q5JSH3 913 aa5.91□□□□□ -1.46
PTPRM-209ENST00000578698 GOLGA6L1Q8N7Z2 621 aa5.91□□□□□ -1.46
PTPRM-209ENST00000578698 RAB6BQ9NRW1 208 aa5.91□□□□□ -1.46
PTPRM-209ENST00000578698 PIK3R2O00459 728 aa5.9□□□□□ -1.46
PTPRM-209ENST00000578698 BMP4P12644 408 aa5.9□□□□□ -1.46
PTPRM-209ENST00000578698 WASHC4Q2M389 1173 aa5.9□□□□□ -1.46
PTPRM-209ENST00000578698 RNF20Q5VTR2 975 aa5.9□□□□□ -1.46
PTPRM-209ENST00000578698 RETREG2Q8NC44 543 aa5.9□□□□□ -1.46
PTPRM-209ENST00000578698 TRAIPQ9BWF2 469 aa5.9□□□□□ -1.46
PTPRM-209ENST00000578698 ZBBXA8MT70 800 aa5.89□□□□□ -1.47
PTPRM-209ENST00000578698 C1QTNF9BB2RNN3 333 aa5.89□□□□□ -1.47
PTPRM-209ENST00000578698 THBS1P07996 1170 aa5.89□□□□□ -1.47
PTPRM-209ENST00000578698 CSB-PGBD3P0DP91 1061 aa5.89□□□□□ -1.47
PTPRM-209ENST00000578698 SCTRP47872 440 aa5.89□□□□□ -1.47
PTPRM-209ENST00000578698 CCDC125Q86Z20 511 aa5.89□□□□□ -1.47
PTPRM-209ENST00000578698 PGBD3Q8N328 593 aa5.89□□□□□ -1.47
PTPRM-209ENST00000578698 PCDHB11Q9Y5F2 797 aa5.89□□□□□ -1.47
PTPRM-209ENST00000578698 A0A1B0GTH6 734 aa5.88□□□□□ -1.47
PTPRM-209ENST00000578698 GNB5O14775 395 aa5.88□□□□□ -1.47
PTPRM-209ENST00000578698 PPP1R15AO75807 674 aaPredicted RBP5.88□□□□□ -1.47
PTPRM-209ENST00000578698 GTF2E1P29083 439 aaPredicted RBP5.88□□□□□ -1.47
PTPRM-209ENST00000578698 IRF5Q13568 498 aa5.88□□□□□ -1.47
PTPRM-209ENST00000578698 TRIM34Q9BYJ4 488 aa5.88□□□□□ -1.47
PTPRM-209ENST00000578698 SEMA6BQ9H3T3 888 aa5.88□□□□□ -1.47
PTPRM-209ENST00000578698 RUBCNLQ9H714 662 aa5.88□□□□□ -1.47
PTPRM-209ENST00000578698 GGA1Q9UJY5 639 aa5.88□□□□□ -1.47
PTPRM-209ENST00000578698 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.87□□□□□ -1.47
PTPRM-209ENST00000578698 FBXO45P0C2W1 286 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 CHRNA4P43681 627 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 VAC14Q08AM6 782 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 HDGFL1Q5TGJ6 251 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 LINC00114Q6XXX2 140 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 CD163Q86VB7 1156 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 CNKSR1Q969H4 720 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 ABHD17AQ96GS6 310 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 OSBPL3Q9H4L5 887 aa5.87□□□□□ -1.47
PTPRM-209ENST00000578698 ATXN7L1Q9ULK2 861 aaPredicted RBP5.87□□□□□ -1.47
PTPRM-209ENST00000578698 GPR37L1O60883 481 aa5.86□□□□□ -1.47
PTPRM-209ENST00000578698 FGFR3P22607 806 aa5.86□□□□□ -1.47
PTPRM-209ENST00000578698 DOC2BQ14184 412 aa5.86□□□□□ -1.47
PTPRM-209ENST00000578698 EFHC2Q5JST6 749 aa5.86□□□□□ -1.47
PTPRM-209ENST00000578698 GNASQ5JWF2 1037 aa5.86□□□□□ -1.47
PTPRM-209ENST00000578698 ZMYM1Q5SVZ6 1142 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms