RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 BCL2L13Q9BXK5 485 aa16.97■□□□□ 0.31
CTC1-203ENST00000578240 ATRNO75882 1429 aa16.97■□□□□ 0.31
CTC1-203ENST00000578240 TNS2Q63HR2 1409 aa16.97■□□□□ 0.31
CTC1-203ENST00000578240 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
CTC1-203ENST00000578240 RGS12O14924 1447 aa16.97■□□□□ 0.31
CTC1-203ENST00000578240 VAMP4O75379 141 aa16.96■□□□□ 0.31
CTC1-203ENST00000578240 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
CTC1-203ENST00000578240 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
CTC1-203ENST00000578240 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.31
CTC1-203ENST00000578240 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.31
CTC1-203ENST00000578240 SSH1Q8WYL5 1049 aa16.95■□□□□ 0.3
CTC1-203ENST00000578240 TSPYL4Q9UJ04 414 aa16.95■□□□□ 0.3
CTC1-203ENST00000578240 TAF7Q15545 349 aaPredicted RBP16.94■□□□□ 0.3
CTC1-203ENST00000578240 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
CTC1-203ENST00000578240 IFNL2Q8IZJ0 200 aa16.94■□□□□ 0.3
CTC1-203ENST00000578240 ZCRB1Q8TBF4 217 aaKnown RBP16.94■□□□□ 0.3
CTC1-203ENST00000578240 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
CTC1-203ENST00000578240 SPATA31A5Q5VU36 1347 aa16.93■□□□□ 0.3
CTC1-203ENST00000578240 SPATA31A7Q8IWB4 1347 aa16.93■□□□□ 0.3
CTC1-203ENST00000578240 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
CTC1-203ENST00000578240 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
CTC1-203ENST00000578240 UNC5CLQ8IV45 518 aa16.92■□□□□ 0.3
CTC1-203ENST00000578240 KCNQ3O43525 872 aa16.91■□□□□ 0.3
CTC1-203ENST00000578240 ALDH1L2Q3SY69 923 aa16.91■□□□□ 0.3
CTC1-203ENST00000578240 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
CTC1-203ENST00000578240 SBF2Q86WG5 1849 aa16.91■□□□□ 0.3
CTC1-203ENST00000578240 KCPQ6ZWJ8 1503 aa16.91■□□□□ 0.3
CTC1-203ENST00000578240 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
CTC1-203ENST00000578240 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
CTC1-203ENST00000578240 BRWD3Q6RI45 1802 aa16.9■□□□□ 0.3
CTC1-203ENST00000578240 TEFQ10587 303 aa16.9■□□□□ 0.3
CTC1-203ENST00000578240 NKX1-1Q15270 411 aaPredicted RBP16.9■□□□□ 0.3
CTC1-203ENST00000578240 ERICH6BQ5W0A0 696 aa16.9■□□□□ 0.3
CTC1-203ENST00000578240 EXOC6Q8TAG9 804 aa16.9■□□□□ 0.3
CTC1-203ENST00000578240 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
CTC1-203ENST00000578240 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
CTC1-203ENST00000578240 BRPF1P55201 1214 aaPredicted RBP16.89■□□□□ 0.29
CTC1-203ENST00000578240 GJD4Q96KN9 370 aaPredicted RBP16.89■□□□□ 0.29
CTC1-203ENST00000578240 CRBNQ96SW2 442 aa16.89■□□□□ 0.29
CTC1-203ENST00000578240 RLBP1P12271 317 aa16.88■□□□□ 0.29
CTC1-203ENST00000578240 MRPL50Q8N5N7 158 aaKnown RBP16.88■□□□□ 0.29
CTC1-203ENST00000578240 UPF1Q92900 1129 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTC1-203ENST00000578240 EIF4A1P60842 406 aaKnown RBP16.88■□□□□ 0.29
CTC1-203ENST00000578240 TJP1Q07157 1748 aa16.87■□□□□ 0.29
CTC1-203ENST00000578240 BTBD11A6QL63 1104 aa16.87■□□□□ 0.29
CTC1-203ENST00000578240 TCERG1O14776 1098 aaKnown RBP16.87■□□□□ 0.29
CTC1-203ENST00000578240 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
CTC1-203ENST00000578240 FRAT1Q92837 279 aaPredicted RBP16.87■□□□□ 0.29
CTC1-203ENST00000578240 THRAP3Q9Y2W1 955 aaKnown RBP16.87■□□□□ 0.29
CTC1-203ENST00000578240 KIF16BQ96L93 1317 aa16.86■□□□□ 0.29
CTC1-203ENST00000578240 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
CTC1-203ENST00000578240 TRIM27P14373 513 aa16.86■□□□□ 0.29
CTC1-203ENST00000578240 VPS72Q15906 364 aa16.86■□□□□ 0.29
CTC1-203ENST00000578240 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
CTC1-203ENST00000578240 BARGINQ6ZT62 677 aa16.85■□□□□ 0.29
CTC1-203ENST00000578240 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
CTC1-203ENST00000578240 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
CTC1-203ENST00000578240 PDE3AQ14432 1141 aa16.85■□□□□ 0.29
CTC1-203ENST00000578240 NFATC2IPQ8NCF5 419 aa16.85■□□□□ 0.29
CTC1-203ENST00000578240 DDX54Q8TDD1 881 aaKnown RBP16.85■□□□□ 0.29
CTC1-203ENST00000578240 NHSQ6T4R5 1651 aa16.84■□□□□ 0.29
CTC1-203ENST00000578240 NOB1Q9ULX3 412 aaKnown RBP16.84■□□□□ 0.29
CTC1-203ENST00000578240 SOS1Q07889 1333 aaPredicted RBP16.83■□□□□ 0.29
CTC1-203ENST00000578240 EP400Q96L91 3159 aa16.83■□□□□ 0.28
CTC1-203ENST00000578240 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
CTC1-203ENST00000578240 ZKSCAN2Q63HK3 967 aa16.83■□□□□ 0.28
CTC1-203ENST00000578240 PPP4R2Q9NY27 417 aa16.83■□□□□ 0.28
CTC1-203ENST00000578240 BTAF1O14981 1849 aa16.83■□□□□ 0.28
CTC1-203ENST00000578240 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
CTC1-203ENST00000578240 ZNF790Q6PG37 636 aa16.82■□□□□ 0.28
CTC1-203ENST00000578240 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
CTC1-203ENST00000578240 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
CTC1-203ENST00000578240 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
CTC1-203ENST00000578240 PRAMEF22A3QJZ6 481 aa16.81■□□□□ 0.28
CTC1-203ENST00000578240 ERVV-2B6SEH9 535 aa16.81■□□□□ 0.28
CTC1-203ENST00000578240 CANXP27824 592 aaKnown RBP16.81■□□□□ 0.28
CTC1-203ENST00000578240 CLUAP1Q96AJ1 413 aa16.81■□□□□ 0.28
CTC1-203ENST00000578240 BCL9O00512 1426 aa16.81■□□□□ 0.28
CTC1-203ENST00000578240 HOXB7P09629 217 aa16.81■□□□□ 0.28
CTC1-203ENST00000578240 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
CTC1-203ENST00000578240 ABCC4O15439 1325 aa16.8■□□□□ 0.28
CTC1-203ENST00000578240 GIGYF1O75420 1035 aaPredicted RBP16.8■□□□□ 0.28
CTC1-203ENST00000578240 CABP4P57796 275 aa16.8■□□□□ 0.28
CTC1-203ENST00000578240 COG6Q9Y2V7 657 aa16.8■□□□□ 0.28
CTC1-203ENST00000578240 B4GALNT3Q6L9W6 998 aa16.79■□□□□ 0.28
CTC1-203ENST00000578240 G2E3Q7L622 706 aa16.79■□□□□ 0.28
CTC1-203ENST00000578240 ZNF831Q5JPB2 1677 aa16.79■□□□□ 0.28
CTC1-203ENST00000578240 RREB1Q92766 1687 aa16.79■□□□□ 0.28
CTC1-203ENST00000578240 EXOC5O00471 708 aa16.78■□□□□ 0.28
CTC1-203ENST00000578240 DDB1Q16531 1140 aa16.78■□□□□ 0.28
CTC1-203ENST00000578240 FAM98CQ17RN3 349 aaKnown RBP16.78■□□□□ 0.28
CTC1-203ENST00000578240 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
CTC1-203ENST00000578240 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
CTC1-203ENST00000578240 ARHGAP45Q92619 1136 aa16.78■□□□□ 0.28
CTC1-203ENST00000578240 ZNF496Q96IT1 587 aaPredicted RBP16.78■□□□□ 0.28
CTC1-203ENST00000578240 AFDNP55196 1824 aaKnown RBP16.78■□□□□ 0.28
CTC1-203ENST00000578240 NECTIN2Q92692 538 aa16.78■□□□□ 0.28
CTC1-203ENST00000578240 HDGFL1Q5TGJ6 251 aa16.77■□□□□ 0.28
CTC1-203ENST00000578240 SEPT12Q8IYM1 358 aa16.77■□□□□ 0.28
CTC1-203ENST00000578240 PXDNLA1KZ92 1463 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms