RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 CCDC178Q5BJE1 867 aa11.62□□□□□ -0.55
USP6-205ENST00000574788 CTNNBL1Q8WYA6 563 aaPredicted RBP11.62□□□□□ -0.55
USP6-205ENST00000574788 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
USP6-205ENST00000574788 ANO10Q9NW15 660 aa11.62□□□□□ -0.55
USP6-205ENST00000574788 UQCRHLA0A096LP55 91 aa11.62□□□□□ -0.55
USP6-205ENST00000574788 UQCRHP07919 91 aa11.62□□□□□ -0.55
USP6-205ENST00000574788 PPP1R14CQ8TAE6 165 aa11.62□□□□□ -0.55
USP6-205ENST00000574788 KANK4Q5T7N3 995 aaPredicted RBP11.61□□□□□ -0.55
USP6-205ENST00000574788 ATF7IPQ6VMQ6 1270 aa11.61□□□□□ -0.55
USP6-205ENST00000574788 AIDAQ96BJ3 306 aa11.61□□□□□ -0.55
USP6-205ENST00000574788 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
USP6-205ENST00000574788 GSDMDP57764 484 aa11.61□□□□□ -0.55
USP6-205ENST00000574788 STARD3NLO95772 234 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
USP6-205ENST00000574788 LRRC27Q9C0I9 530 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 YEATS4O95619 227 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 PANK1Q8TE04 598 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 STMN4Q9H169 189 aaPredicted RBP11.6□□□□□ -0.55
USP6-205ENST00000574788 PTPRGP23470 1445 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 IQCA1Q86XH1 822 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 ANKS4BQ8N8V4 417 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 MACROD2A1Z1Q3 448 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 USP5P45974 858 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 TWISTNBQ3B726 338 aaPredicted RBP11.6□□□□□ -0.55
USP6-205ENST00000574788 CAVIN4Q5BKX8 364 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 TIGD1Q96MW7 591 aa11.6□□□□□ -0.55
USP6-205ENST00000574788 GOLIM4O00461 696 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 CCDC14Q49A88 953 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 TUBB4BP68371 445 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 CEP112Q8N8E3 955 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 PDRG1Q9NUG6 133 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 FHOD3Q2V2M9 1422 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 BAG4O95429 457 aaKnown RBP11.59□□□□□ -0.55
USP6-205ENST00000574788 MRPS9P82933 396 aaKnown RBP11.59□□□□□ -0.55
USP6-205ENST00000574788 CEP135Q66GS9 1140 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 CTCFLQ8NI51 663 aaPredicted RBP11.59□□□□□ -0.55
USP6-205ENST00000574788 PRPHP41219 470 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 LRSAM1Q6UWE0 723 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
USP6-205ENST00000574788 GRPEL1Q9HAV7 217 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 CGNQ9P2M7 1197 aaKnown RBP11.59□□□□□ -0.55
USP6-205ENST00000574788 TOP1P11387 765 aaKnown RBP11.59□□□□□ -0.55
USP6-205ENST00000574788 KANK3Q6NY19 840 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 IQCGQ9H095 443 aaKnown RBP11.59□□□□□ -0.55
USP6-205ENST00000574788 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
USP6-205ENST00000574788 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
USP6-205ENST00000574788 TRAF1Q13077 416 aa11.59□□□□□ -0.55
USP6-205ENST00000574788 NSRP1Q9H0G5 558 aaKnown RBP11.59□□□□□ -0.55
USP6-205ENST00000574788 KDM4AO75164 1064 aa11.58□□□□□ -0.56
USP6-205ENST00000574788 KIF4BQ2VIQ3 1234 aa11.58□□□□□ -0.56
USP6-205ENST00000574788 CRACR2BQ8N4Y2 399 aaPredicted RBP11.58□□□□□ -0.56
USP6-205ENST00000574788 KIAA1524Q8TCG1 905 aa11.58□□□□□ -0.56
USP6-205ENST00000574788 PPP4R3BQ5MIZ7 849 aa11.58□□□□□ -0.56
USP6-205ENST00000574788 CCDC155Q8N6L0 562 aa11.58□□□□□ -0.56
USP6-205ENST00000574788 NUP88Q99567 741 aaPredicted RBP11.58□□□□□ -0.56
USP6-205ENST00000574788 MKNK2Q9HBH9 465 aa11.58□□□□□ -0.56
USP6-205ENST00000574788 SH2B1Q9NRF2 756 aaPredicted RBP11.58□□□□□ -0.56
USP6-205ENST00000574788 MTHFSP49914 203 aa11.58□□□□□ -0.56
USP6-205ENST00000574788 CKAP4Q07065 602 aaKnown RBP11.58□□□□□ -0.56
USP6-205ENST00000574788 RAI14Q9P0K7 980 aa11.58□□□□□ -0.56
USP6-205ENST00000574788 SEPT6Q14141 434 aa11.58□□□□□ -0.56
USP6-205ENST00000574788 HLTFQ14527 1009 aaKnown RBP eCLIP11.58□□□□□ -0.56
USP6-205ENST00000574788 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.58□□□□□ -0.56
USP6-205ENST00000574788 AACSQ86V21 672 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 STK3Q13188 491 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 TDRD9Q8NDG6 1382 aaKnown RBP11.57□□□□□ -0.56
USP6-205ENST00000574788 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
USP6-205ENST00000574788 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 DZIP1Q86YF9 867 aaKnown RBP11.57□□□□□ -0.56
USP6-205ENST00000574788 RAB11FIP3O75154 756 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 TTC14Q96N46 770 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 UTP14AQ9BVJ6 771 aaKnown RBP11.57□□□□□ -0.56
USP6-205ENST00000574788 KIF5BP33176 963 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 FBF1Q8TES7 1133 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 DNAAF4Q8WXU2 420 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 CALML4Q96GE6 196 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 TCP11L1Q9NUJ3 509 aa11.57□□□□□ -0.56
USP6-205ENST00000574788 FAM177BA6PVY3 158 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 ATP2A1O14983 1001 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 LMAN1P49257 510 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 RGS22Q8NE09 1264 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 SLC4A2P04920 1241 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 GTPBP4Q9BZE4 634 aaKnown RBP11.56□□□□□ -0.56
USP6-205ENST00000574788 ANAPC4Q9UJX5 808 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 CCDC88BA6NC98 1476 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 TOP2AP11388 1531 aaKnown RBP11.56□□□□□ -0.56
USP6-205ENST00000574788 TBC1D5Q92609 795 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 SMARCC1Q92922 1105 aaPredicted RBP11.56□□□□□ -0.56
USP6-205ENST00000574788 HSPA4P34932 840 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 CCDC183Q5T5S1 534 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 CCDC174Q6PII3 467 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 TOM1L2Q6ZVM7 507 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 PKNOX2Q96KN3 472 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 ODF2LQ9ULJ1 636 aa11.56□□□□□ -0.56
USP6-205ENST00000574788 NOL3O60936 208 aaKnown RBP11.55□□□□□ -0.56
USP6-205ENST00000574788 KIAA0753Q2KHM9 967 aa11.55□□□□□ -0.56
USP6-205ENST00000574788 A0A1W2PRG0 241 aa11.55□□□□□ -0.56
USP6-205ENST00000574788 ERICH4A6NGS2 130 aa11.55□□□□□ -0.56
USP6-205ENST00000574788 FMNL3Q8IVF7 1028 aa11.55□□□□□ -0.56
USP6-205ENST00000574788 NAPBQ9H115 298 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms