RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 WASHC4Q2M389 1173 aa9.56□□□□□ -0.88
TOM1L1-215ENST00000572905 FOXR1Q6PIV2 292 aa9.56□□□□□ -0.88
TOM1L1-215ENST00000572905 CCDC97Q96F63 343 aaPredicted RBP9.56□□□□□ -0.88
TOM1L1-215ENST00000572905 GMCL1Q96IK5 515 aa9.56□□□□□ -0.88
TOM1L1-215ENST00000572905 H7C1W4 665 aa9.55□□□□□ -0.88
TOM1L1-215ENST00000572905 SRSF11Q05519 484 aaKnown RBP9.55□□□□□ -0.88
TOM1L1-215ENST00000572905 SEMA3FQ13275 785 aa9.55□□□□□ -0.88
TOM1L1-215ENST00000572905 GPAMQ9HCL2 828 aa9.55□□□□□ -0.88
TOM1L1-215ENST00000572905 SERPINA10Q9UK55 444 aa9.55□□□□□ -0.88
TOM1L1-215ENST00000572905 GTF2E1P29083 439 aaPredicted RBP9.54□□□□□ -0.88
TOM1L1-215ENST00000572905 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
TOM1L1-215ENST00000572905 TMEM214Q6NUQ4 689 aaKnown RBP9.54□□□□□ -0.88
TOM1L1-215ENST00000572905 LYPD4Q6UWN0 246 aa9.54□□□□□ -0.88
TOM1L1-215ENST00000572905 XAGE2Q96GT9 111 aa9.54□□□□□ -0.88
TOM1L1-215ENST00000572905 ETNK1Q9HBU6 452 aa9.54□□□□□ -0.88
TOM1L1-215ENST00000572905 HRH3Q9Y5N1 445 aa9.54□□□□□ -0.88
TOM1L1-215ENST00000572905 F11P03951 625 aa9.53□□□□□ -0.88
TOM1L1-215ENST00000572905 WDR44Q5JSH3 913 aa9.53□□□□□ -0.88
TOM1L1-215ENST00000572905 GNASQ5JWF2 1037 aa9.53□□□□□ -0.88
TOM1L1-215ENST00000572905 FHDC1Q9C0D6 1143 aaPredicted RBP9.53□□□□□ -0.88
TOM1L1-215ENST00000572905 NUCKS1Q9H1E3 243 aaKnown RBP9.53□□□□□ -0.88
TOM1L1-215ENST00000572905 MBIPQ9NS73 344 aa9.53□□□□□ -0.88
TOM1L1-215ENST00000572905 TLR1Q15399 786 aa9.52□□□□□ -0.89
TOM1L1-215ENST00000572905 PLPP7Q8NBV4 271 aa9.52□□□□□ -0.89
TOM1L1-215ENST00000572905 SIRT1Q96EB6 747 aa9.52□□□□□ -0.89
TOM1L1-215ENST00000572905 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
TOM1L1-215ENST00000572905 CHIC2Q9UKJ5 165 aa9.52□□□□□ -0.89
TOM1L1-215ENST00000572905 MAP3K10Q02779 954 aa9.51□□□□□ -0.89
TOM1L1-215ENST00000572905 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
TOM1L1-215ENST00000572905 C4orf17Q53FE4 359 aa9.51□□□□□ -0.89
TOM1L1-215ENST00000572905 IGF1RP08069 1367 aa9.5□□□□□ -0.89
TOM1L1-215ENST00000572905 ARHGEF15O94989 841 aa9.5□□□□□ -0.89
TOM1L1-215ENST00000572905 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
TOM1L1-215ENST00000572905 RNF225M0QZC1 329 aaPredicted RBP9.49□□□□□ -0.89
TOM1L1-215ENST00000572905 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
TOM1L1-215ENST00000572905 CELA2BP08218 269 aaPredicted RBP9.49□□□□□ -0.89
TOM1L1-215ENST00000572905 GDF10P55107 478 aa9.49□□□□□ -0.89
TOM1L1-215ENST00000572905 RUBCNLQ9H714 662 aa9.49□□□□□ -0.89
TOM1L1-215ENST00000572905 THBS1P07996 1170 aa9.48□□□□□ -0.89
TOM1L1-215ENST00000572905 MX2P20592 715 aa9.48□□□□□ -0.89
TOM1L1-215ENST00000572905 SOX11P35716 441 aa9.48□□□□□ -0.89
TOM1L1-215ENST00000572905 GSK3AP49840 483 aa9.48□□□□□ -0.89
TOM1L1-215ENST00000572905 SCNN1DP51172 638 aa9.48□□□□□ -0.89
TOM1L1-215ENST00000572905 MARSP56192 900 aaKnown RBP9.48□□□□□ -0.89
TOM1L1-215ENST00000572905 MAP7D1Q3KQU3 841 aa9.48□□□□□ -0.89
TOM1L1-215ENST00000572905 RHBDD1Q8TEB9 315 aa9.48□□□□□ -0.89
TOM1L1-215ENST00000572905 INHAP05111 366 aa9.46□□□□□ -0.9
TOM1L1-215ENST00000572905 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
TOM1L1-215ENST00000572905 MSX1P28360 303 aa9.46□□□□□ -0.9
TOM1L1-215ENST00000572905 PLA2G4AP47712 749 aa9.46□□□□□ -0.9
TOM1L1-215ENST00000572905 RASSF7Q02833 373 aa9.46□□□□□ -0.9
TOM1L1-215ENST00000572905 PPARGC1BQ86YN6 1023 aaKnown RBP9.46□□□□□ -0.9
TOM1L1-215ENST00000572905 PGBD3Q8N328 593 aa9.46□□□□□ -0.9
TOM1L1-215ENST00000572905 CALR3Q96L12 384 aaKnown RBP9.46□□□□□ -0.9
TOM1L1-215ENST00000572905 SERTAD1Q9UHV2 236 aa9.46□□□□□ -0.9
TOM1L1-215ENST00000572905 GDF11O95390 407 aa9.45□□□□□ -0.9
TOM1L1-215ENST00000572905 IRS1P35568 1242 aa9.45□□□□□ -0.9
TOM1L1-215ENST00000572905 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
TOM1L1-215ENST00000572905 GLMNQ92990 594 aa9.45□□□□□ -0.9
TOM1L1-215ENST00000572905 SKIP12755 728 aa9.44□□□□□ -0.9
TOM1L1-215ENST00000572905 TMEM151AQ8N4L1 468 aa9.44□□□□□ -0.9
TOM1L1-215ENST00000572905 ACDQ96AP0 544 aa9.44□□□□□ -0.9
TOM1L1-215ENST00000572905 ENAMQ9NRM1 1142 aa9.44□□□□□ -0.9
TOM1L1-215ENST00000572905 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
TOM1L1-215ENST00000572905 POM121CA8CG34 1229 aa9.43□□□□□ -0.9
TOM1L1-215ENST00000572905 TMEM229AB2RXF0 380 aa9.42□□□□□ -0.9
TOM1L1-215ENST00000572905 BCRP11274 1271 aa9.42□□□□□ -0.9
TOM1L1-215ENST00000572905 EML3Q32P44 896 aa9.42□□□□□ -0.9
TOM1L1-215ENST00000572905 EFHC2Q5JST6 749 aa9.42□□□□□ -0.9
TOM1L1-215ENST00000572905 TBC1D9Q6ZT07 1266 aa9.42□□□□□ -0.9
TOM1L1-215ENST00000572905 NEDD1Q8NHV4 660 aa9.42□□□□□ -0.9
TOM1L1-215ENST00000572905 AIDAQ96BJ3 306 aa9.42□□□□□ -0.9
TOM1L1-215ENST00000572905 ALG2Q9H553 416 aa9.42□□□□□ -0.9
TOM1L1-215ENST00000572905 SMTNP53814 917 aa9.41□□□□□ -0.9
TOM1L1-215ENST00000572905 SCARF2Q96GP6 870 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-215ENST00000572905 CFHR5Q9BXR6 569 aa9.41□□□□□ -0.9
TOM1L1-215ENST00000572905 PHF24Q9UPV7 400 aa9.41□□□□□ -0.9
TOM1L1-215ENST00000572905 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
TOM1L1-215ENST00000572905 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.9
TOM1L1-215ENST00000572905 ABHD17AQ96GS6 310 aa9.4□□□□□ -0.9
TOM1L1-215ENST00000572905 NOD1Q9Y239 953 aa9.4□□□□□ -0.9
TOM1L1-215ENST00000572905 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
TOM1L1-215ENST00000572905 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-215ENST00000572905 GTF2IP78347 998 aa9.39□□□□□ -0.91
TOM1L1-215ENST00000572905 PSME1Q06323 249 aa9.39□□□□□ -0.91
TOM1L1-215ENST00000572905 NCOA4Q13772 614 aa9.39□□□□□ -0.91
TOM1L1-215ENST00000572905 LBRQ14739 615 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-215ENST00000572905 OXCT2Q9BYC2 517 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-215ENST00000572905 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-215ENST00000572905 CNTNAP5Q8WYK1 1306 aa9.38□□□□□ -0.91
TOM1L1-215ENST00000572905 ATP4AP20648 1035 aa9.38□□□□□ -0.91
TOM1L1-215ENST00000572905 MAP2K3P46734 347 aa9.38□□□□□ -0.91
TOM1L1-215ENST00000572905 USP3Q9Y6I4 520 aa9.38□□□□□ -0.91
TOM1L1-215ENST00000572905 A6NJY4 79 aa9.37□□□□□ -0.91
TOM1L1-215ENST00000572905 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
TOM1L1-215ENST00000572905 BNIP3LO60238 219 aa9.37□□□□□ -0.91
TOM1L1-215ENST00000572905 HDGFL1Q5TGJ6 251 aa9.37□□□□□ -0.91
TOM1L1-215ENST00000572905 KLRG1Q96E93 195 aa9.37□□□□□ -0.91
TOM1L1-215ENST00000572905 CRISPLD1Q9H336 500 aa9.37□□□□□ -0.91
TOM1L1-215ENST00000572905 CABP1Q9NZU7 370 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms