RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 NMRK2Q9NPI5 230 aa18.09■□□□□ 0.49
CCDC40-205ENST00000571028 TAF1LQ8IZX4 1826 aa18.09■□□□□ 0.49
CCDC40-205ENST00000571028 TGFB2P61812 414 aa18.08■□□□□ 0.48
CCDC40-205ENST00000571028 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
CCDC40-205ENST00000571028 INSRP06213 1382 aa18.07■□□□□ 0.48
CCDC40-205ENST00000571028 TOGARAM1Q9Y4F4 1720 aa18.07■□□□□ 0.48
CCDC40-205ENST00000571028 HSP90AB2PQ58FF8 381 aa18.07■□□□□ 0.48
CCDC40-205ENST00000571028 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
CCDC40-205ENST00000571028 RBM46Q8TBY0 533 aaKnown RBP18.07■□□□□ 0.48
CCDC40-205ENST00000571028 KLRG1Q96E93 195 aa18.07■□□□□ 0.48
CCDC40-205ENST00000571028 TMOD3Q9NYL9 352 aa18.07■□□□□ 0.48
CCDC40-205ENST00000571028 FLT4P35916 1363 aa18.06■□□□□ 0.48
CCDC40-205ENST00000571028 A0A0G2JLW4 131 aa18.06■□□□□ 0.48
CCDC40-205ENST00000571028 PER1O15534 1290 aaPredicted RBP18.06■□□□□ 0.48
CCDC40-205ENST00000571028 FCHSD2O94868 740 aa18.06■□□□□ 0.48
CCDC40-205ENST00000571028 ATP6V1AP38606 617 aa18.06■□□□□ 0.48
CCDC40-205ENST00000571028 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
CCDC40-205ENST00000571028 COL13A1Q5TAT6 717 aaPredicted RBP18.05■□□□□ 0.48
CCDC40-205ENST00000571028 TNS4Q8IZW8 715 aa18.05■□□□□ 0.48
CCDC40-205ENST00000571028 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
CCDC40-205ENST00000571028 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
CCDC40-205ENST00000571028 KIF20BQ96Q89 1820 aa18.05■□□□□ 0.48
CCDC40-205ENST00000571028 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
CCDC40-205ENST00000571028 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
CCDC40-205ENST00000571028 FSTL1Q12841 308 aa18.04■□□□□ 0.48
CCDC40-205ENST00000571028 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
CCDC40-205ENST00000571028 NLGN1Q8N2Q7 840 aa18.04■□□□□ 0.48
CCDC40-205ENST00000571028 KDM2BQ8NHM5 1336 aa18.03■□□□□ 0.48
CCDC40-205ENST00000571028 HTRA3P83110 453 aa18.03■□□□□ 0.48
CCDC40-205ENST00000571028 TRAPPC3LQ5T215 181 aa18.03■□□□□ 0.48
CCDC40-205ENST00000571028 RTCBQ9Y3I0 505 aaKnown RBP18.03■□□□□ 0.48
CCDC40-205ENST00000571028 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
CCDC40-205ENST00000571028 ITPK1Q13572 414 aa18.02■□□□□ 0.48
CCDC40-205ENST00000571028 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
CCDC40-205ENST00000571028 WDR90Q96KV7 1748 aa18.02■□□□□ 0.48
CCDC40-205ENST00000571028 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
CCDC40-205ENST00000571028 DPEP1P16444 411 aa18.01■□□□□ 0.47
CCDC40-205ENST00000571028 NKX1-1Q15270 411 aaPredicted RBP18.01■□□□□ 0.47
CCDC40-205ENST00000571028 JMYQ8N9B5 988 aa18.01■□□□□ 0.47
CCDC40-205ENST00000571028 ASAP1Q9ULH1 1129 aa18.01■□□□□ 0.47
CCDC40-205ENST00000571028 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
CCDC40-205ENST00000571028 EMILIN1Q9Y6C2 1016 aa18■□□□□ 0.47
CCDC40-205ENST00000571028 ITGB4P16144 1822 aa17.98■□□□□ 0.47
CCDC40-205ENST00000571028 RFC4P35249 363 aa17.98■□□□□ 0.47
CCDC40-205ENST00000571028 ADRA2BP18089 450 aa17.97■□□□□ 0.47
CCDC40-205ENST00000571028 PRELPP51888 382 aa17.97■□□□□ 0.47
CCDC40-205ENST00000571028 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
CCDC40-205ENST00000571028 RNF181Q9P0P0 153 aa17.97■□□□□ 0.47
CCDC40-205ENST00000571028 PIM2Q9P1W9 311 aa17.97■□□□□ 0.47
CCDC40-205ENST00000571028 PKD1L3Q7Z443 1732 aa17.97■□□□□ 0.47
CCDC40-205ENST00000571028 DALRD3Q5D0E6 543 aaKnown RBP17.96■□□□□ 0.47
CCDC40-205ENST00000571028 SMC1BQ8NDV3 1235 aa17.96■□□□□ 0.47
CCDC40-205ENST00000571028 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
CCDC40-205ENST00000571028 ATG3Q9NT62 314 aa17.96■□□□□ 0.47
CCDC40-205ENST00000571028 KCPQ6ZWJ8 1503 aa17.96■□□□□ 0.47
CCDC40-205ENST00000571028 N4BP2Q86UW6 1770 aaPredicted RBP17.96■□□□□ 0.47
CCDC40-205ENST00000571028 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
CCDC40-205ENST00000571028 RRAGCQ9HB90 399 aa17.95■□□□□ 0.46
CCDC40-205ENST00000571028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC40-205ENST00000571028 POLKQ9UBT6 870 aa17.95■□□□□ 0.46
CCDC40-205ENST00000571028 MAP2P11137 1827 aaKnown RBP17.94■□□□□ 0.46
CCDC40-205ENST00000571028 KIF13BQ9NQT8 1826 aa17.94■□□□□ 0.46
CCDC40-205ENST00000571028 GYS1P13807 737 aa17.94■□□□□ 0.46
CCDC40-205ENST00000571028 PHKG2P15735 406 aa17.94■□□□□ 0.46
CCDC40-205ENST00000571028 KIAA1551Q9HCM1 1747 aa17.93■□□□□ 0.46
CCDC40-205ENST00000571028 NPC1L1Q9UHC9 1359 aa17.92■□□□□ 0.46
CCDC40-205ENST00000571028 C4AP0C0L4 1744 aa17.92■□□□□ 0.46
CCDC40-205ENST00000571028 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
CCDC40-205ENST00000571028 RC3H1Q5TC82 1133 aaKnown RBP17.92■□□□□ 0.46
CCDC40-205ENST00000571028 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
CCDC40-205ENST00000571028 CNTNAP4Q9C0A0 1308 aa17.91■□□□□ 0.46
CCDC40-205ENST00000571028 KDRP35968 1356 aa17.91■□□□□ 0.46
CCDC40-205ENST00000571028 NCAPD2Q15021 1401 aa17.9■□□□□ 0.46
CCDC40-205ENST00000571028 RPS6KA4O75676 772 aa17.9■□□□□ 0.46
CCDC40-205ENST00000571028 KCNA3P22001 575 aa17.9■□□□□ 0.46
CCDC40-205ENST00000571028 MTHFSP49914 203 aa17.9■□□□□ 0.46
CCDC40-205ENST00000571028 EYA1Q99502 592 aa17.9■□□□□ 0.46
CCDC40-205ENST00000571028 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
CCDC40-205ENST00000571028 HSP90AB1P08238 724 aaKnown RBP17.88■□□□□ 0.45
CCDC40-205ENST00000571028 HSPA1AP0DMV8 641 aaKnown RBP17.88■□□□□ 0.45
CCDC40-205ENST00000571028 HSPA1BP0DMV9 641 aaKnown RBP17.88■□□□□ 0.45
CCDC40-205ENST00000571028 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
CCDC40-205ENST00000571028 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
CCDC40-205ENST00000571028 CHRNA5P30532 468 aa17.86■□□□□ 0.45
CCDC40-205ENST00000571028 CABP4P57796 275 aa17.86■□□□□ 0.45
CCDC40-205ENST00000571028 SLC4A9Q96Q91 983 aa17.86■□□□□ 0.45
CCDC40-205ENST00000571028 ZC3H4Q9UPT8 1303 aaKnown RBP17.86■□□□□ 0.45
CCDC40-205ENST00000571028 VEGFAP15692 232 aaPredicted RBP17.84■□□□□ 0.45
CCDC40-205ENST00000571028 EIF4A2Q14240 407 aaKnown RBP17.84■□□□□ 0.45
CCDC40-205ENST00000571028 SRP68Q9UHB9 627 aaKnown RBP17.84■□□□□ 0.45
CCDC40-205ENST00000571028 ARFGEF1Q9Y6D6 1849 aa17.84■□□□□ 0.45
CCDC40-205ENST00000571028 USP42Q9H9J4 1324 aaKnown RBP17.83■□□□□ 0.44
CCDC40-205ENST00000571028 PTCD1O75127 700 aaKnown RBP17.83■□□□□ 0.44
CCDC40-205ENST00000571028 FKBP8Q14318 412 aa17.83■□□□□ 0.44
CCDC40-205ENST00000571028 RALBP1Q15311 655 aa17.83■□□□□ 0.44
CCDC40-205ENST00000571028 BRCA1P38398 1863 aaKnown RBP17.83■□□□□ 0.44
CCDC40-205ENST00000571028 LMNB1P20700 586 aa17.82■□□□□ 0.44
CCDC40-205ENST00000571028 CRKLP46109 303 aaKnown RBP17.82■□□□□ 0.44
CCDC40-205ENST00000571028 RASSF7Q02833 373 aa17.82■□□□□ 0.44
CCDC40-205ENST00000571028 DDR1Q08345 913 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms