RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PLA2G4EQ3MJ16 856 aa11.38□□□□□ -0.59
CHD9-220ENST00000569794 OIP5O43482 229 aa11.37□□□□□ -0.59
CHD9-220ENST00000569794 MYCP01106 439 aaPredicted RBP11.37□□□□□ -0.59
CHD9-220ENST00000569794 CFHR5Q9BXR6 569 aa11.37□□□□□ -0.59
CHD9-220ENST00000569794 XAGE2Q96GT9 111 aa11.36□□□□□ -0.59
CHD9-220ENST00000569794 ZSCAN10Q96SZ4 725 aaPredicted RBP11.36□□□□□ -0.59
CHD9-220ENST00000569794 GPAMQ9HCL2 828 aa11.36□□□□□ -0.59
CHD9-220ENST00000569794 A0A1B0GTH6 734 aa11.35□□□□□ -0.59
CHD9-220ENST00000569794 ITGB2P05107 769 aa11.35□□□□□ -0.59
CHD9-220ENST00000569794 PHKA2P46019 1235 aa11.35□□□□□ -0.59
CHD9-220ENST00000569794 MAP2K3P46734 347 aa11.35□□□□□ -0.59
CHD9-220ENST00000569794 OXCT2Q9BYC2 517 aaPredicted RBP11.35□□□□□ -0.59
CHD9-220ENST00000569794 FHDC1Q9C0D6 1143 aaPredicted RBP11.35□□□□□ -0.59
CHD9-220ENST00000569794 MSTNO14793 375 aa11.34□□□□□ -0.59
CHD9-220ENST00000569794 SPOCK3Q9BQ16 436 aa11.33□□□□□ -0.6
CHD9-220ENST00000569794 UBAP2LQ14157 1087 aaKnown RBP11.32□□□□□ -0.6
CHD9-220ENST00000569794 GNASQ5JWF2 1037 aa11.32□□□□□ -0.6
CHD9-220ENST00000569794 PHF24Q9UPV7 400 aa11.32□□□□□ -0.6
CHD9-220ENST00000569794 C4orf17Q53FE4 359 aa11.31□□□□□ -0.6
CHD9-220ENST00000569794 TMEM214Q6NUQ4 689 aaKnown RBP11.31□□□□□ -0.6
CHD9-220ENST00000569794 GTF2E1P29083 439 aaPredicted RBP11.3□□□□□ -0.6
CHD9-220ENST00000569794 SNRPNP63162 240 aaKnown RBP11.3□□□□□ -0.6
CHD9-220ENST00000569794 LBRQ14739 615 aaKnown RBP11.3□□□□□ -0.6
CHD9-220ENST00000569794 TSGA10IPQ3SY00 556 aa11.3□□□□□ -0.6
CHD9-220ENST00000569794 ESCO1Q5FWF5 840 aa11.3□□□□□ -0.6
CHD9-220ENST00000569794 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
CHD9-220ENST00000569794 SHISA8B8ZZ34 492 aa11.29□□□□□ -0.6
CHD9-220ENST00000569794 MSX1P28360 303 aa11.29□□□□□ -0.6
CHD9-220ENST00000569794 C1orf229Q6ZS94 237 aaPredicted RBP11.29□□□□□ -0.6
CHD9-220ENST00000569794 PHTF2Q8N3S3 785 aa11.29□□□□□ -0.6
CHD9-220ENST00000569794 RUBCNLQ9H714 662 aa11.29□□□□□ -0.6
CHD9-220ENST00000569794 TBC1D2BQ9UPU7 963 aa11.29□□□□□ -0.6
CHD9-220ENST00000569794 PROCP04070 461 aa11.28□□□□□ -0.6
CHD9-220ENST00000569794 CSB-PGBD3P0DP91 1061 aa11.28□□□□□ -0.6
CHD9-220ENST00000569794 PGBD3Q8N328 593 aa11.28□□□□□ -0.6
CHD9-220ENST00000569794 ETNK1Q9HBU6 452 aa11.28□□□□□ -0.6
CHD9-220ENST00000569794 DOLKQ9UPQ8 538 aa11.28□□□□□ -0.6
CHD9-220ENST00000569794 USP4Q13107 963 aa11.27□□□□□ -0.61
CHD9-220ENST00000569794 GALNT6Q8NCL4 622 aa11.27□□□□□ -0.61
CHD9-220ENST00000569794 STAU1O95793 577 aaKnown RBP11.26□□□□□ -0.61
CHD9-220ENST00000569794 EIF4G2P78344 907 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHD9-220ENST00000569794 PPARGC1BQ86YN6 1023 aaKnown RBP11.26□□□□□ -0.61
CHD9-220ENST00000569794 GDF2Q9UK05 429 aaPredicted RBP11.26□□□□□ -0.61
CHD9-220ENST00000569794 ATXN7L1Q9ULK2 861 aaPredicted RBP11.26□□□□□ -0.61
CHD9-220ENST00000569794 IRF5Q13568 498 aa11.25□□□□□ -0.61
CHD9-220ENST00000569794 EFHC2Q5JST6 749 aa11.25□□□□□ -0.61
CHD9-220ENST00000569794 RHBDD1Q8TEB9 315 aa11.25□□□□□ -0.61
CHD9-220ENST00000569794 ADAM23O75077 832 aa11.24□□□□□ -0.61
CHD9-220ENST00000569794 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
CHD9-220ENST00000569794 GOLGA6L1Q8N7Z2 621 aa11.24□□□□□ -0.61
CHD9-220ENST00000569794 EDARADDQ8WWZ3 215 aa11.24□□□□□ -0.61
CHD9-220ENST00000569794 NDFIP2Q9NV92 336 aa11.24□□□□□ -0.61
CHD9-220ENST00000569794 MKL2Q9ULH7 1088 aa11.24□□□□□ -0.61
CHD9-220ENST00000569794 C2CD2LO14523 706 aa11.23□□□□□ -0.61
CHD9-220ENST00000569794 TLR1Q15399 786 aa11.23□□□□□ -0.61
CHD9-220ENST00000569794 RNF135Q8IUD6 432 aa11.23□□□□□ -0.61
CHD9-220ENST00000569794 ABHD17AQ96GS6 310 aa11.23□□□□□ -0.61
CHD9-220ENST00000569794 CRISPLD1Q9H336 500 aa11.23□□□□□ -0.61
CHD9-220ENST00000569794 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
CHD9-220ENST00000569794 BMP4P12644 408 aa11.22□□□□□ -0.61
CHD9-220ENST00000569794 OXLD1Q5BKU9 147 aa11.22□□□□□ -0.61
CHD9-220ENST00000569794 KRBA1A5PL33 1030 aa11.21□□□□□ -0.61
CHD9-220ENST00000569794 BNIP3LO60238 219 aa11.21□□□□□ -0.61
CHD9-220ENST00000569794 FGFR3P22607 806 aa11.21□□□□□ -0.61
CHD9-220ENST00000569794 RRAGCQ9HB90 399 aa11.21□□□□□ -0.61
CHD9-220ENST00000569794 PRM3Q9NNZ6 103 aa11.21□□□□□ -0.61
CHD9-220ENST00000569794 SCNN1DP51172 638 aa11.2□□□□□ -0.62
CHD9-220ENST00000569794 SLCO4C1Q6ZQN7 724 aa11.2□□□□□ -0.62
CHD9-220ENST00000569794 ALYREFQ86V81 257 aaKnown RBP11.2□□□□□ -0.62
CHD9-220ENST00000569794 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
CHD9-220ENST00000569794 SLC24A1O60721 1099 aa11.19□□□□□ -0.62
CHD9-220ENST00000569794 HOXB4P17483 251 aaPredicted RBP11.19□□□□□ -0.62
CHD9-220ENST00000569794 COL8A1P27658 744 aa11.19□□□□□ -0.62
CHD9-220ENST00000569794 PLA2G4AP47712 749 aa11.19□□□□□ -0.62
CHD9-220ENST00000569794 CTBSQ01459 385 aa11.19□□□□□ -0.62
CHD9-220ENST00000569794 TBC1D9Q6ZT07 1266 aa11.19□□□□□ -0.62
CHD9-220ENST00000569794 DNAAF2Q9NVR5 837 aaKnown RBP11.18□□□□□ -0.62
CHD9-220ENST00000569794 GGA1Q9UJY5 639 aa11.18□□□□□ -0.62
CHD9-220ENST00000569794 INHAP05111 366 aa11.17□□□□□ -0.62
CHD9-220ENST00000569794 ATP4AP20648 1035 aa11.17□□□□□ -0.62
CHD9-220ENST00000569794 GDF10P55107 478 aa11.17□□□□□ -0.62
CHD9-220ENST00000569794 VAC14Q08AM6 782 aa11.17□□□□□ -0.62
CHD9-220ENST00000569794 LINC00114Q6XXX2 140 aa11.17□□□□□ -0.62
CHD9-220ENST00000569794 FIGNL1Q6PIW4 674 aa11.16□□□□□ -0.62
CHD9-220ENST00000569794 C1orf216Q8TAB5 229 aa11.16□□□□□ -0.62
CHD9-220ENST00000569794 AMPD1P23109 780 aa11.15□□□□□ -0.62
CHD9-220ENST00000569794 ZCCHC2Q9C0B9 1178 aaKnown RBP11.15□□□□□ -0.62
CHD9-220ENST00000569794 PCDHGC4Q9Y5F7 938 aa11.15□□□□□ -0.62
CHD9-220ENST00000569794 ARAFP10398 606 aa11.14□□□□□ -0.63
CHD9-220ENST00000569794 EPXP11678 715 aa11.14□□□□□ -0.63
CHD9-220ENST00000569794 NLRP8Q86W28 1048 aa11.14□□□□□ -0.63
CHD9-220ENST00000569794 NIFKQ9BYG3 293 aaKnown RBP11.14□□□□□ -0.63
CHD9-220ENST00000569794 BAG6P46379 1132 aa11.13□□□□□ -0.63
CHD9-220ENST00000569794 SMTNP53814 917 aa11.13□□□□□ -0.63
CHD9-220ENST00000569794 MAP7D1Q3KQU3 841 aa11.13□□□□□ -0.63
CHD9-220ENST00000569794 BTBD6Q96KE9 485 aa11.13□□□□□ -0.63
CHD9-220ENST00000569794 SUV39H2Q9H5I1 410 aa11.13□□□□□ -0.63
CHD9-220ENST00000569794 GDPD2Q9HCC8 539 aa11.13□□□□□ -0.63
CHD9-220ENST00000569794 GRIN2CQ14957 1233 aa11.12□□□□□ -0.63
CHD9-220ENST00000569794 PLPP7Q8NBV4 271 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms