RNA–Protein interactions for RNA: ENST00000568859.5

SNAP23-221, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-221ENST00000568859 ITGB4P16144 1822 aa22.1■■□□□ 1.13
SNAP23-221ENST00000568859 INSRP06213 1382 aa22.1■■□□□ 1.13
SNAP23-221ENST00000568859 TRAPPC3LQ5T215 181 aa22.09■■□□□ 1.13
SNAP23-221ENST00000568859 SPG7Q9UQ90 795 aa22.09■■□□□ 1.13
SNAP23-221ENST00000568859 C10orf71Q711Q0 1435 aa22.08■■□□□ 1.13
SNAP23-221ENST00000568859 N4BP2Q86UW6 1770 aaPredicted RBP22.08■■□□□ 1.13
SNAP23-221ENST00000568859 DPEP1P16444 411 aa22.08■■□□□ 1.13
SNAP23-221ENST00000568859 NKX1-1Q15270 411 aaPredicted RBP22.08■■□□□ 1.13
SNAP23-221ENST00000568859 SMC1BQ8NDV3 1235 aa22.08■■□□□ 1.13
SNAP23-221ENST00000568859 RTCBQ9Y3I0 505 aaKnown RBP22.08■■□□□ 1.13
SNAP23-221ENST00000568859 PARP3Q9Y6F1 533 aa22.07■■□□□ 1.12
SNAP23-221ENST00000568859 FLT4P35916 1363 aa22.07■■□□□ 1.12
SNAP23-221ENST00000568859 KIF24Q5T7B8 1368 aa22.07■■□□□ 1.12
SNAP23-221ENST00000568859 HSP90AB2PQ58FF8 381 aa22.06■■□□□ 1.12
SNAP23-221ENST00000568859 ADRA2BP18089 450 aa22.05■■□□□ 1.12
SNAP23-221ENST00000568859 ITPK1Q13572 414 aa22.05■■□□□ 1.12
SNAP23-221ENST00000568859 PIM2Q9P1W9 311 aa22.05■■□□□ 1.12
SNAP23-221ENST00000568859 MAP2P11137 1827 aaKnown RBP22.04■■□□□ 1.12
SNAP23-221ENST00000568859 KIAA1551Q9HCM1 1747 aa22.04■■□□□ 1.12
SNAP23-221ENST00000568859 GGNBP2Q9H3C7 697 aa22.04■■□□□ 1.12
SNAP23-221ENST00000568859 RRAGCQ9HB90 399 aa22.04■■□□□ 1.12
SNAP23-221ENST00000568859 RNF181Q9P0P0 153 aa22.04■■□□□ 1.12
SNAP23-221ENST00000568859 KCPQ6ZWJ8 1503 aa22.03■■□□□ 1.12
SNAP23-221ENST00000568859 ASAP1Q9ULH1 1129 aa22.03■■□□□ 1.12
SNAP23-221ENST00000568859 FYB1O15117 783 aa22.02■■□□□ 1.12
SNAP23-221ENST00000568859 RFC4P35249 363 aa22.02■■□□□ 1.12
SNAP23-221ENST00000568859 DALRD3Q5D0E6 543 aaKnown RBP22.02■■□□□ 1.12
SNAP23-221ENST00000568859 PKD1L3Q7Z443 1732 aa22.01■■□□□ 1.11
SNAP23-221ENST00000568859 HSPA1AP0DMV8 641 aaKnown RBP22.01■■□□□ 1.11
SNAP23-221ENST00000568859 HSPA1BP0DMV9 641 aaKnown RBP22.01■■□□□ 1.11
SNAP23-221ENST00000568859 DCAF5Q96JK2 942 aa22■■□□□ 1.11
SNAP23-221ENST00000568859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22■■□□□ 1.115e-7■■■■□ 21.8
SNAP23-221ENST00000568859 PCNTO95613 3336 aa21.99■■□□□ 1.11
SNAP23-221ENST00000568859 TNRC6CQ9HCJ0 1690 aaKnown RBP21.99■■□□□ 1.11
SNAP23-221ENST00000568859 C4AP0C0L4 1744 aa21.99■■□□□ 1.11
SNAP23-221ENST00000568859 ARFGEF1Q9Y6D6 1849 aa21.99■■□□□ 1.11
SNAP23-221ENST00000568859 GYS1P13807 737 aa21.98■■□□□ 1.11
SNAP23-221ENST00000568859 RC3H1Q5TC82 1133 aaKnown RBP21.98■■□□□ 1.11
SNAP23-221ENST00000568859 IFNL2Q8IZJ0 200 aa21.98■■□□□ 1.11
SNAP23-221ENST00000568859 ARHGEF1Q92888 912 aaKnown RBP21.98■■□□□ 1.11
SNAP23-221ENST00000568859 ATG3Q9NT62 314 aa21.98■■□□□ 1.11
SNAP23-221ENST00000568859 ZC3H4Q9UPT8 1303 aaKnown RBP21.98■■□□□ 1.11
SNAP23-221ENST00000568859 BRCA1P38398 1863 aaKnown RBP21.97■■□□□ 1.11
SNAP23-221ENST00000568859 KCNA3P22001 575 aa21.97■■□□□ 1.11
SNAP23-221ENST00000568859 TESK2Q96S53 571 aa21.95■■□□□ 1.1
SNAP23-221ENST00000568859 RBM42Q9BTD8 480 aaKnown RBP21.95■■□□□ 1.1
SNAP23-221ENST00000568859 RPS6KA4O75676 772 aa21.94■■□□□ 1.1
SNAP23-221ENST00000568859 PHKG2P15735 406 aa21.94■■□□□ 1.1
SNAP23-221ENST00000568859 CNTNAP4Q9C0A0 1308 aa21.94■■□□□ 1.1
SNAP23-221ENST00000568859 ST20-MTHFSA0A0A6YYL1 179 aa21.93■■□□□ 1.1
SNAP23-221ENST00000568859 VEGFAP15692 232 aaPredicted RBP21.93■■□□□ 1.1
SNAP23-221ENST00000568859 NCAPD2Q15021 1401 aa21.93■■□□□ 1.1
SNAP23-221ENST00000568859 KDRP35968 1356 aa21.92■■□□□ 1.1
SNAP23-221ENST00000568859 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
SNAP23-221ENST00000568859 PPM1GO15355 546 aaPredicted RBP21.91■■□□□ 1.1
SNAP23-221ENST00000568859 EMILIN1Q9Y6C2 1016 aa21.9■■□□□ 1.1
SNAP23-221ENST00000568859 ERVV-2B6SEH9 535 aa21.89■■□□□ 1.09
SNAP23-221ENST00000568859 ZNF831Q5JPB2 1677 aa21.88■■□□□ 1.09
SNAP23-221ENST00000568859 GLTPD2A6NH11 291 aa21.88■■□□□ 1.09
SNAP23-221ENST00000568859 HSP90AB1P08238 724 aaKnown RBP21.88■■□□□ 1.09
SNAP23-221ENST00000568859 LMNB1P20700 586 aa21.87■■□□□ 1.09
SNAP23-221ENST00000568859 EYA1Q99502 592 aa21.87■■□□□ 1.09
SNAP23-221ENST00000568859 KIF20BQ96Q89 1820 aa21.87■■□□□ 1.09
SNAP23-221ENST00000568859 CHRNA5P30532 468 aa21.86■■□□□ 1.09
SNAP23-221ENST00000568859 SLC4A9Q96Q91 983 aa21.86■■□□□ 1.09
SNAP23-221ENST00000568859 SBF1O95248 1867 aa21.86■■□□□ 1.09
SNAP23-221ENST00000568859 WASHC2AQ641Q2 1341 aa21.85■■□□□ 1.09
SNAP23-221ENST00000568859 CDCA8Q53HL2 280 aa21.84■■□□□ 1.09
SNAP23-221ENST00000568859 USP42Q9H9J4 1324 aaKnown RBP21.83■■□□□ 1.09
SNAP23-221ENST00000568859 RASSF7Q02833 373 aa21.83■■□□□ 1.09
SNAP23-221ENST00000568859 FKBP8Q14318 412 aa21.83■■□□□ 1.09
SNAP23-221ENST00000568859 COL5A3P25940 1745 aaPredicted RBP21.83■■□□□ 1.08
SNAP23-221ENST00000568859 CABP4P57796 275 aa21.82■■□□□ 1.08
SNAP23-221ENST00000568859 DDR1Q08345 913 aa21.82■■□□□ 1.08
SNAP23-221ENST00000568859 DPY19L2Q6NUT2 758 aa21.82■■□□□ 1.08
SNAP23-221ENST00000568859 SRP68Q9UHB9 627 aaKnown RBP21.82■■□□□ 1.08
SNAP23-221ENST00000568859 KDM6AO15550 1401 aaPredicted RBP21.81■■□□□ 1.08
SNAP23-221ENST00000568859 SLC34A2O95436 690 aa21.81■■□□□ 1.08
SNAP23-221ENST00000568859 CRKLP46109 303 aaKnown RBP21.81■■□□□ 1.08
SNAP23-221ENST00000568859 ZPR1O75312 459 aa21.8■■□□□ 1.08
SNAP23-221ENST00000568859 CREBZFQ9NS37 354 aa21.8■■□□□ 1.08
SNAP23-221ENST00000568859 POLRMTO00411 1230 aaKnown RBP21.79■■□□□ 1.08
SNAP23-221ENST00000568859 PTCD1O75127 700 aaKnown RBP21.78■■□□□ 1.08
SNAP23-221ENST00000568859 PRDM10Q9NQV6 1147 aa21.78■■□□□ 1.08
SNAP23-221ENST00000568859 TM4SF1P30408 202 aa21.77■■□□□ 1.08
SNAP23-221ENST00000568859 PLEKHO1Q53GL0 409 aaPredicted RBP21.77■■□□□ 1.08
SNAP23-221ENST00000568859 TTLL6Q8N841 843 aa21.77■■□□□ 1.08
SNAP23-221ENST00000568859 AIDAQ96BJ3 306 aa21.77■■□□□ 1.08
SNAP23-221ENST00000568859 MYH14Q7Z406 1995 aaKnown RBP21.77■■□□□ 1.08
SNAP23-221ENST00000568859 MKRN1Q9UHC7 482 aaKnown RBP21.76■■□□□ 1.07
SNAP23-221ENST00000568859 ANKRD26Q9UPS8 1709 aa21.75■■□□□ 1.07
SNAP23-221ENST00000568859 AMOTQ4VCS5 1084 aa21.74■■□□□ 1.07
SNAP23-221ENST00000568859 CTCFP49711 727 aaPredicted RBP21.73■■□□□ 1.07
SNAP23-221ENST00000568859 MTHFSP49914 203 aa21.73■■□□□ 1.07
SNAP23-221ENST00000568859 C1orf141Q5JVX7 400 aa21.73■■□□□ 1.07
SNAP23-221ENST00000568859 CHADLQ6NUI6 762 aa21.73■■□□□ 1.07
SNAP23-221ENST00000568859 ZNF530Q6P9A1 599 aaPredicted RBP21.73■■□□□ 1.07
SNAP23-221ENST00000568859 FOXN1O15353 648 aa21.72■■□□□ 1.07
SNAP23-221ENST00000568859 EIF4A2Q14240 407 aaKnown RBP21.72■■□□□ 1.07
SNAP23-221ENST00000568859 USPL1Q5W0Q7 1092 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms