RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 C5P01031 1676 aa8.77□□□□□ -1.01
PTPN9-205ENST00000568108 GOLGB1Q14789 3259 aaKnown RBP8.77□□□□□ -1.01
PTPN9-205ENST00000568108 GNPATO15228 680 aa8.76□□□□□ -1.01
PTPN9-205ENST00000568108 SSFA2P28290 1259 aa8.76□□□□□ -1.01
PTPN9-205ENST00000568108 ATP6V1AP38606 617 aa8.76□□□□□ -1.01
PTPN9-205ENST00000568108 IFNL2Q8IZJ0 200 aa8.76□□□□□ -1.01
PTPN9-205ENST00000568108 LINC00116Q8NCU8 138 aa8.76□□□□□ -1.01
PTPN9-205ENST00000568108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTPN9-205ENST00000568108 ASAP1Q9ULH1 1129 aa8.76□□□□□ -1.01
PTPN9-205ENST00000568108 WASHC2AQ641Q2 1341 aa8.76□□□□□ -1.01
PTPN9-205ENST00000568108 IGSF1Q8N6C5 1336 aa8.76□□□□□ -1.01
PTPN9-205ENST00000568108 NSD3Q9BZ95 1437 aa8.75□□□□□ -1.01
PTPN9-205ENST00000568108 SPDYE4A6NLX3 237 aa8.75□□□□□ -1.01
PTPN9-205ENST00000568108 ITPK1Q13572 414 aa8.75□□□□□ -1.01
PTPN9-205ENST00000568108 IFFO2Q5TF58 517 aa8.75□□□□□ -1.01
PTPN9-205ENST00000568108 POLKQ9UBT6 870 aa8.75□□□□□ -1.01
PTPN9-205ENST00000568108 C4BP0C0L5 1744 aa8.74□□□□□ -1.01
PTPN9-205ENST00000568108 CENPBP07199 599 aaPredicted RBP8.74□□□□□ -1.01
PTPN9-205ENST00000568108 PHKG2P15735 406 aa8.74□□□□□ -1.01
PTPN9-205ENST00000568108 HSPA6P17066 643 aa8.74□□□□□ -1.01
PTPN9-205ENST00000568108 ATG3Q9NT62 314 aa8.74□□□□□ -1.01
PTPN9-205ENST00000568108 TAF1LQ8IZX4 1826 aa8.74□□□□□ -1.01
PTPN9-205ENST00000568108 ADCY9O60503 1353 aa8.73□□□□□ -1.01
PTPN9-205ENST00000568108 ITGB4P16144 1822 aa8.73□□□□□ -1.01
PTPN9-205ENST00000568108 NCAPD2Q15021 1401 aa8.73□□□□□ -1.01
PTPN9-205ENST00000568108 MMP10P09238 476 aa8.73□□□□□ -1.01
PTPN9-205ENST00000568108 TNNT2P45379 298 aaPredicted RBP8.73□□□□□ -1.01
PTPN9-205ENST00000568108 TRAPPC3LQ5T215 181 aa8.73□□□□□ -1.01
PTPN9-205ENST00000568108 KIF20BQ96Q89 1820 aa8.73□□□□□ -1.01
PTPN9-205ENST00000568108 TOGARAM1Q9Y4F4 1720 aa8.72□□□□□ -1.01
PTPN9-205ENST00000568108 EIF4A2Q14240 407 aaKnown RBP8.72□□□□□ -1.01
PTPN9-205ENST00000568108 NLGN1Q8N2Q7 840 aa8.72□□□□□ -1.01
PTPN9-205ENST00000568108 POLR3GLQ9BT43 218 aa8.72□□□□□ -1.01
PTPN9-205ENST00000568108 RBM42Q9BTD8 480 aaKnown RBP8.72□□□□□ -1.01
PTPN9-205ENST00000568108 RTCBQ9Y3I0 505 aaKnown RBP8.72□□□□□ -1.01
PTPN9-205ENST00000568108 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
PTPN9-205ENST00000568108 PKD1L3Q7Z443 1732 aa8.71□□□□□ -1.01
PTPN9-205ENST00000568108 A0A0G2JLW4 131 aa8.71□□□□□ -1.02
PTPN9-205ENST00000568108 ERVV-2B6SEH9 535 aa8.71□□□□□ -1.02
PTPN9-205ENST00000568108 KIF3CO14782 793 aa8.71□□□□□ -1.02
PTPN9-205ENST00000568108 TGFB2P61812 414 aa8.71□□□□□ -1.02
PTPN9-205ENST00000568108 RC3H1Q5TC82 1133 aaKnown RBP8.71□□□□□ -1.02
PTPN9-205ENST00000568108 ARHGEF1Q92888 912 aaKnown RBP8.71□□□□□ -1.02
PTPN9-205ENST00000568108 BCS1LQ9Y276 419 aa8.71□□□□□ -1.02
PTPN9-205ENST00000568108 MAP2P11137 1827 aaKnown RBP8.7□□□□□ -1.02
PTPN9-205ENST00000568108 HSP90AB1P08238 724 aaKnown RBP8.7□□□□□ -1.02
PTPN9-205ENST00000568108 RFC4P35249 363 aa8.7□□□□□ -1.02
PTPN9-205ENST00000568108 PLEKHO1Q53GL0 409 aaPredicted RBP8.7□□□□□ -1.02
PTPN9-205ENST00000568108 ARHGAP27Q6ZUM4 889 aa8.7□□□□□ -1.02
PTPN9-205ENST00000568108 DCAF5Q96JK2 942 aa8.7□□□□□ -1.02
PTPN9-205ENST00000568108 SLC4A9Q96Q91 983 aa8.7□□□□□ -1.02
PTPN9-205ENST00000568108 RPS6KA4O75676 772 aa8.69□□□□□ -1.02
PTPN9-205ENST00000568108 FCHSD2O94868 740 aa8.69□□□□□ -1.02
PTPN9-205ENST00000568108 GYS1P13807 737 aa8.69□□□□□ -1.02
PTPN9-205ENST00000568108 DPEP1P16444 411 aa8.69□□□□□ -1.02
PTPN9-205ENST00000568108 CABP4P57796 275 aa8.69□□□□□ -1.02
PTPN9-205ENST00000568108 MKRN4PQ13434 485 aaPredicted RBP8.69□□□□□ -1.02
PTPN9-205ENST00000568108 CCDC87Q9NVE4 849 aa8.69□□□□□ -1.02
PTPN9-205ENST00000568108 PARP3Q9Y6F1 533 aa8.69□□□□□ -1.02
PTPN9-205ENST00000568108 MTHFSP49914 203 aa8.68□□□□□ -1.02
PTPN9-205ENST00000568108 AMOTQ4VCS5 1084 aa8.68□□□□□ -1.02
PTPN9-205ENST00000568108 ZNF530Q6P9A1 599 aaPredicted RBP8.68□□□□□ -1.02
PTPN9-205ENST00000568108 CNTNAP4Q9C0A0 1308 aa8.68□□□□□ -1.02
PTPN9-205ENST00000568108 PXDNLA1KZ92 1463 aa8.68□□□□□ -1.02
PTPN9-205ENST00000568108 CEP350Q5VT06 3117 aa8.68□□□□□ -1.02
PTPN9-205ENST00000568108 PTCD1O75127 700 aaKnown RBP8.67□□□□□ -1.02
PTPN9-205ENST00000568108 TOMM70O94826 608 aa8.67□□□□□ -1.02
PTPN9-205ENST00000568108 KDRP35968 1356 aa8.67□□□□□ -1.02
PTPN9-205ENST00000568108 APLP1P51693 650 aa8.67□□□□□ -1.02
PTPN9-205ENST00000568108 NFATC2IPQ8NCF5 419 aa8.67□□□□□ -1.02
PTPN9-205ENST00000568108 PLEKHG2Q9H7P9 1386 aa8.67□□□□□ -1.02
PTPN9-205ENST00000568108 PANK3Q9H999 370 aa8.67□□□□□ -1.02
PTPN9-205ENST00000568108 ANKRD26Q9UPS8 1709 aa8.66□□□□□ -1.02
PTPN9-205ENST00000568108 CRKLP46109 303 aaKnown RBP8.66□□□□□ -1.02
PTPN9-205ENST00000568108 C1orf141Q5JVX7 400 aa8.66□□□□□ -1.02
PTPN9-205ENST00000568108 NMRK2Q9NPI5 230 aa8.66□□□□□ -1.02
PTPN9-205ENST00000568108 PIM2Q9P1W9 311 aa8.66□□□□□ -1.02
PTPN9-205ENST00000568108 CICQ96RK0 1608 aaPredicted RBP8.65□□□□□ -1.02
PTPN9-205ENST00000568108 C10orf71Q711Q0 1435 aa8.65□□□□□ -1.02
PTPN9-205ENST00000568108 KCNA3P22001 575 aa8.65□□□□□ -1.02
PTPN9-205ENST00000568108 VASPP50552 380 aaPredicted RBP8.65□□□□□ -1.02
PTPN9-205ENST00000568108 DALRD3Q5D0E6 543 aaKnown RBP8.65□□□□□ -1.02
PTPN9-205ENST00000568108 C9orf131Q5VYM1 1079 aa8.65□□□□□ -1.02
PTPN9-205ENST00000568108 SULT6B1Q6IMI4 303 aa8.65□□□□□ -1.02
PTPN9-205ENST00000568108 MORC1Q86VD1 984 aa8.65□□□□□ -1.02
PTPN9-205ENST00000568108 AEBP1Q8IUX7 1158 aa8.65□□□□□ -1.02
PTPN9-205ENST00000568108 DNAJC5GQ8N7S2 189 aa8.65□□□□□ -1.02
PTPN9-205ENST00000568108 SRP68Q9UHB9 627 aaKnown RBP8.65□□□□□ -1.02
PTPN9-205ENST00000568108 KDM6AO15550 1401 aaPredicted RBP8.64□□□□□ -1.03
PTPN9-205ENST00000568108 N4BP2Q86UW6 1770 aaPredicted RBP8.64□□□□□ -1.03
PTPN9-205ENST00000568108 EIF4G2P78344 907 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPN9-205ENST00000568108 C16orf71Q8IYS4 520 aaPredicted RBP8.64□□□□□ -1.03
PTPN9-205ENST00000568108 KIF13BQ9NQT8 1826 aa8.64□□□□□ -1.03
PTPN9-205ENST00000568108 TM4SF1P30408 202 aa8.63□□□□□ -1.03
PTPN9-205ENST00000568108 CHRNA5P30532 468 aa8.63□□□□□ -1.03
PTPN9-205ENST00000568108 DDR1Q08345 913 aa8.63□□□□□ -1.03
PTPN9-205ENST00000568108 INTS5Q6P9B9 1019 aaKnown RBP8.63□□□□□ -1.03
PTPN9-205ENST00000568108 RBM46Q8TBY0 533 aaKnown RBP8.63□□□□□ -1.03
PTPN9-205ENST00000568108 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
PTPN9-205ENST00000568108 MYH14Q7Z406 1995 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms