RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 PKDCCQ504Y2 493 aa11□□□□□ -0.65
SMG1-214ENST00000568038 PRAG1Q86YV5 1406 aa11□□□□□ -0.65
SMG1-214ENST00000568038 CFAP70Q5T0N1 1121 aa10.99□□□□□ -0.65
SMG1-214ENST00000568038 SLC26A8Q96RN1 970 aa10.99□□□□□ -0.65
SMG1-214ENST00000568038 PLEKHG1Q9ULL1 1385 aa10.99□□□□□ -0.65
SMG1-214ENST00000568038 FAM187AA6NFU0 413 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 TRIM66O15016 1216 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 FDX1P10109 184 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 PRR20EP86478 221 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 PRR20CP86479 221 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 PRR20DP86480 221 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 PRR20BP86481 221 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 PRR20AP86496 221 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 SPIRE2Q8WWL2 714 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 AK7Q96M32 723 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 NRXN1Q9ULB1 1477 aa10.98□□□□□ -0.65
SMG1-214ENST00000568038 C6orf229H3BNL8 230 aa10.97□□□□□ -0.65
SMG1-214ENST00000568038 NDUFV2P19404 249 aa10.97□□□□□ -0.65
SMG1-214ENST00000568038 MMP16P51512 607 aa10.97□□□□□ -0.65
SMG1-214ENST00000568038 NBPF1Q3BBV0 1214 aa10.97□□□□□ -0.65
SMG1-214ENST00000568038 C14orf93Q9H972 538 aaKnown RBP10.97□□□□□ -0.65
SMG1-214ENST00000568038 PKD2L1Q9P0L9 805 aa10.97□□□□□ -0.65
SMG1-214ENST00000568038 NPHP4O75161 1426 aaPredicted RBP10.97□□□□□ -0.65
SMG1-214ENST00000568038 PIK3C2GO75747 1445 aa10.97□□□□□ -0.65
SMG1-214ENST00000568038 DXOO77932 396 aaKnown RBP10.96□□□□□ -0.65
SMG1-214ENST00000568038 TMEM132EQ6IEE7 984 aa10.96□□□□□ -0.65
SMG1-214ENST00000568038 BEGAINQ9BUH8 593 aa10.96□□□□□ -0.65
SMG1-214ENST00000568038 PCDHGC3Q9UN70 934 aa10.96□□□□□ -0.65
SMG1-214ENST00000568038 POLR1AO95602 1720 aaPredicted RBP10.95□□□□□ -0.66
SMG1-214ENST00000568038 ROCK2O75116 1388 aaKnown RBP10.95□□□□□ -0.66
SMG1-214ENST00000568038 MOXD2PA6NHM9 499 aa10.95□□□□□ -0.66
SMG1-214ENST00000568038 PARP9Q8IXQ6 854 aa10.95□□□□□ -0.66
SMG1-214ENST00000568038 ALKQ9UM73 1620 aa10.95□□□□□ -0.66
SMG1-214ENST00000568038 ADAMTS13Q76LX8 1427 aa10.94□□□□□ -0.66
SMG1-214ENST00000568038 DGAT1O75907 488 aa10.94□□□□□ -0.66
SMG1-214ENST00000568038 TBX22Q9Y458 520 aa10.94□□□□□ -0.66
SMG1-214ENST00000568038 STRCQ7RTU9 1775 aa10.94□□□□□ -0.66
SMG1-214ENST00000568038 IQGAP1P46940 1657 aa10.94□□□□□ -0.66
SMG1-214ENST00000568038 NRXN3Q9Y4C0 1643 aa10.94□□□□□ -0.66
SMG1-214ENST00000568038 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
SMG1-214ENST00000568038 MED14O60244 1454 aa10.93□□□□□ -0.66
SMG1-214ENST00000568038 CARD11Q9BXL7 1154 aa10.93□□□□□ -0.66
SMG1-214ENST00000568038 SLC24A3Q9HC58 644 aa10.93□□□□□ -0.66
SMG1-214ENST00000568038 STK26Q9P289 416 aa10.93□□□□□ -0.66
SMG1-214ENST00000568038 TRPM1Q7Z4N2 1603 aa10.93□□□□□ -0.66
SMG1-214ENST00000568038 RALGAPBQ86X10 1494 aa10.93□□□□□ -0.66
SMG1-214ENST00000568038 METP08581 1390 aa10.92□□□□□ -0.66
SMG1-214ENST00000568038 RETREG3Q86VR2 466 aa10.92□□□□□ -0.66
SMG1-214ENST00000568038 MS4A1P11836 297 aa10.91□□□□□ -0.66
SMG1-214ENST00000568038 JUNDP17535 347 aa10.91□□□□□ -0.66
SMG1-214ENST00000568038 MYT1Q01538 1121 aa10.91□□□□□ -0.66
SMG1-214ENST00000568038 TRIM32Q13049 653 aa10.91□□□□□ -0.66
SMG1-214ENST00000568038 CYP4X1Q8N118 509 aa10.91□□□□□ -0.66
SMG1-214ENST00000568038 TRAK1Q9UPV9 953 aa10.91□□□□□ -0.66
SMG1-214ENST00000568038 KIAA1210Q9ULL0 1709 aa10.9□□□□□ -0.66
SMG1-214ENST00000568038 TBC1D2Q9BYX2 928 aa10.9□□□□□ -0.66
SMG1-214ENST00000568038 LAMC1P11047 1609 aa10.9□□□□□ -0.66
SMG1-214ENST00000568038 ASXL1Q8IXJ9 1541 aa10.89□□□□□ -0.67
SMG1-214ENST00000568038 ZNF787Q6DD87 383 aa10.89□□□□□ -0.67
SMG1-214ENST00000568038 AMOTL2Q9Y2J4 779 aa10.89□□□□□ -0.67
SMG1-214ENST00000568038 PTPRUQ92729 1446 aa10.89□□□□□ -0.67
SMG1-214ENST00000568038 ADGRB1O14514 1584 aa10.89□□□□□ -0.67
SMG1-214ENST00000568038 DIP2AQ14689 1571 aa10.89□□□□□ -0.67
SMG1-214ENST00000568038 SETD1AO15047 1707 aaKnown RBP10.89□□□□□ -0.67
SMG1-214ENST00000568038 GPRASP1Q5JY77 1395 aa10.89□□□□□ -0.67
SMG1-214ENST00000568038 TTC24A2A3L6 582 aaPredicted RBP10.88□□□□□ -0.67
SMG1-214ENST00000568038 PDE4DQ08499 809 aa10.88□□□□□ -0.67
SMG1-214ENST00000568038 YTHDC2Q9H6S0 1430 aaKnown RBP10.88□□□□□ -0.67
SMG1-214ENST00000568038 LRPPRCP42704 1394 aaKnown RBP10.88□□□□□ -0.67
SMG1-214ENST00000568038 KCNA6P17658 529 aa10.87□□□□□ -0.67
SMG1-214ENST00000568038 EIF4G2P78344 907 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMG1-214ENST00000568038 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
SMG1-214ENST00000568038 PIK3R4Q99570 1358 aa10.87□□□□□ -0.67
SMG1-214ENST00000568038 HSPA5P11021 654 aaKnown RBP10.86□□□□□ -0.67
SMG1-214ENST00000568038 SAFB2Q14151 953 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMG1-214ENST00000568038 HIRIP3Q9BW71 556 aaPredicted RBP10.86□□□□□ -0.67
SMG1-214ENST00000568038 TOR4AQ9NXH8 423 aa10.86□□□□□ -0.67
SMG1-214ENST00000568038 ABCC11Q96J66 1382 aa10.86□□□□□ -0.67
SMG1-214ENST00000568038 USP47Q96K76 1375 aa10.86□□□□□ -0.67
SMG1-214ENST00000568038 ZNF335Q9H4Z2 1342 aaPredicted RBP10.85□□□□□ -0.67
SMG1-214ENST00000568038 ST8SIA5O15466 376 aa10.85□□□□□ -0.67
SMG1-214ENST00000568038 WAPLQ7Z5K2 1190 aa10.85□□□□□ -0.67
SMG1-214ENST00000568038 PRR7Q8TB68 274 aa10.85□□□□□ -0.67
SMG1-214ENST00000568038 PRAM1Q96QH2 718 aa10.85□□□□□ -0.67
SMG1-214ENST00000568038 POGKQ9P215 609 aa10.85□□□□□ -0.67
SMG1-214ENST00000568038 ST20-MTHFSA0A0A6YYL1 179 aa10.84□□□□□ -0.67
SMG1-214ENST00000568038 WNT7AO00755 349 aa10.84□□□□□ -0.67
SMG1-214ENST00000568038 MTMR2Q13614 643 aa10.84□□□□□ -0.67
SMG1-214ENST00000568038 DIXDC1Q155Q3 683 aa10.84□□□□□ -0.67
SMG1-214ENST00000568038 CSPP1Q1MSJ5 1256 aa10.84□□□□□ -0.67
SMG1-214ENST00000568038 PTCRAQ6ISU1 281 aaPredicted RBP10.84□□□□□ -0.67
SMG1-214ENST00000568038 MRGPRX2Q96LB1 330 aa10.84□□□□□ -0.67
SMG1-214ENST00000568038 PCDHB15Q9Y5E8 787 aa10.84□□□□□ -0.67
SMG1-214ENST00000568038 ROBO2Q9HCK4 1378 aa10.84□□□□□ -0.67
SMG1-214ENST00000568038 CHD2O14647 1828 aaKnown RBP10.84□□□□□ -0.67
SMG1-214ENST00000568038 CENPJQ9HC77 1338 aaPredicted RBP10.84□□□□□ -0.67
SMG1-214ENST00000568038 EIF3AQ14152 1382 aaKnown RBP10.83□□□□□ -0.68
SMG1-214ENST00000568038 PLEKHH1Q9ULM0 1364 aa10.83□□□□□ -0.68
SMG1-214ENST00000568038 RSBN1LQ6PCB5 846 aaPredicted RBP10.83□□□□□ -0.68
SMG1-214ENST00000568038 PROSER2Q86WR7 435 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms