RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 GPR162Q16538 588 aa16.59■□□□□ 0.25
GTF3C1-208ENST00000567843 C1orf141Q5JVX7 400 aa16.59■□□□□ 0.25
GTF3C1-208ENST00000567843 ERVV-2B6SEH9 535 aa16.58■□□□□ 0.24
GTF3C1-208ENST00000567843 GNPATO15228 680 aa16.58■□□□□ 0.24
GTF3C1-208ENST00000567843 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.24
GTF3C1-208ENST00000567843 FLAD1Q8NFF5 587 aa16.58■□□□□ 0.24
GTF3C1-208ENST00000567843 SLC4A9Q96Q91 983 aa16.58■□□□□ 0.24
GTF3C1-208ENST00000567843 KDM6AO15550 1401 aaPredicted RBP16.58■□□□□ 0.24
GTF3C1-208ENST00000567843 QSER1Q2KHR3 1735 aa16.58■□□□□ 0.24
GTF3C1-208ENST00000567843 UTRNP46939 3433 aa16.58■□□□□ 0.24
GTF3C1-208ENST00000567843 C4BP0C0L5 1744 aa16.56■□□□□ 0.24
GTF3C1-208ENST00000567843 MAP3K5Q99683 1374 aa16.56■□□□□ 0.24
GTF3C1-208ENST00000567843 PTCD1O75127 700 aaKnown RBP16.56■□□□□ 0.24
GTF3C1-208ENST00000567843 NFATC2IPQ8NCF5 419 aa16.56■□□□□ 0.24
GTF3C1-208ENST00000567843 TAF1LQ8IZX4 1826 aa16.55■□□□□ 0.24
GTF3C1-208ENST00000567843 DIAPH1O60610 1272 aaKnown RBP16.55■□□□□ 0.24
GTF3C1-208ENST00000567843 KDRP35968 1356 aa16.54■□□□□ 0.24
GTF3C1-208ENST00000567843 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
GTF3C1-208ENST00000567843 LGR6Q9HBX8 967 aa16.54■□□□□ 0.24
GTF3C1-208ENST00000567843 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
GTF3C1-208ENST00000567843 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
GTF3C1-208ENST00000567843 SSFA2P28290 1259 aa16.53■□□□□ 0.24
GTF3C1-208ENST00000567843 PLEKHG2Q9H7P9 1386 aa16.52■□□□□ 0.24
GTF3C1-208ENST00000567843 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
GTF3C1-208ENST00000567843 AKAP4Q5JQC9 854 aa16.51■□□□□ 0.23
GTF3C1-208ENST00000567843 YBX3P16989 372 aaKnown RBP eCLIP16.5■□□□□ 0.23
GTF3C1-208ENST00000567843 TRAPPC3LQ5T215 181 aa16.5■□□□□ 0.23
GTF3C1-208ENST00000567843 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
GTF3C1-208ENST00000567843 COL24A1Q17RW2 1714 aa16.5■□□□□ 0.23
GTF3C1-208ENST00000567843 RNMTO43148 476 aaKnown RBP16.49■□□□□ 0.23
GTF3C1-208ENST00000567843 SLC39A6Q13433 755 aa16.49■□□□□ 0.23
GTF3C1-208ENST00000567843 UBR3Q6ZT12 1888 aa16.49■□□□□ 0.23
GTF3C1-208ENST00000567843 ZNF784Q8NCA9 323 aaPredicted RBP16.48■□□□□ 0.23
GTF3C1-208ENST00000567843 ARHGEF1Q92888 912 aaKnown RBP16.48■□□□□ 0.23
GTF3C1-208ENST00000567843 SLC52A2Q9HAB3 445 aa16.48■□□□□ 0.23
GTF3C1-208ENST00000567843 MMP10P09238 476 aa16.47■□□□□ 0.23
GTF3C1-208ENST00000567843 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
GTF3C1-208ENST00000567843 NPC1L1Q9UHC9 1359 aa16.47■□□□□ 0.23
GTF3C1-208ENST00000567843 GOLGB1Q14789 3259 aaKnown RBP16.47■□□□□ 0.23
GTF3C1-208ENST00000567843 RPS6KA4O75676 772 aa16.46■□□□□ 0.23
GTF3C1-208ENST00000567843 CRKLP46109 303 aaKnown RBP16.46■□□□□ 0.23
GTF3C1-208ENST00000567843 RC3H1Q5TC82 1133 aaKnown RBP16.46■□□□□ 0.23
GTF3C1-208ENST00000567843 DNAJC10Q8IXB1 793 aa16.46■□□□□ 0.23
GTF3C1-208ENST00000567843 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
GTF3C1-208ENST00000567843 RFC4P35249 363 aa16.45■□□□□ 0.22
GTF3C1-208ENST00000567843 COL3A1P02461 1466 aaPredicted RBP16.45■□□□□ 0.22
GTF3C1-208ENST00000567843 SRP68Q9UHB9 627 aaKnown RBP16.44■□□□□ 0.22
GTF3C1-208ENST00000567843 GYS1P13807 737 aa16.43■□□□□ 0.22
GTF3C1-208ENST00000567843 PPP2R1AP30153 589 aa16.43■□□□□ 0.22
GTF3C1-208ENST00000567843 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
GTF3C1-208ENST00000567843 GRIN3BO60391 1043 aa16.42■□□□□ 0.22
GTF3C1-208ENST00000567843 INTS5Q6P9B9 1019 aaKnown RBP16.42■□□□□ 0.22
GTF3C1-208ENST00000567843 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
GTF3C1-208ENST00000567843 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
GTF3C1-208ENST00000567843 MYH14Q7Z406 1995 aaKnown RBP16.41■□□□□ 0.22
GTF3C1-208ENST00000567843 ADRA2BP18089 450 aa16.41■□□□□ 0.22
GTF3C1-208ENST00000567843 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
GTF3C1-208ENST00000567843 IL17REQ8NFR9 667 aa16.41■□□□□ 0.22
GTF3C1-208ENST00000567843 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
GTF3C1-208ENST00000567843 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
GTF3C1-208ENST00000567843 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
GTF3C1-208ENST00000567843 GNAT3A8MTJ3 354 aa16.39■□□□□ 0.21
GTF3C1-208ENST00000567843 FKBP8Q14318 412 aa16.39■□□□□ 0.21
GTF3C1-208ENST00000567843 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
GTF3C1-208ENST00000567843 CCDC87Q9NVE4 849 aa16.39■□□□□ 0.21
GTF3C1-208ENST00000567843 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
GTF3C1-208ENST00000567843 CHD4Q14839 1912 aa16.39■□□□□ 0.21
GTF3C1-208ENST00000567843 A0A0G2JLW4 131 aa16.38■□□□□ 0.21
GTF3C1-208ENST00000567843 CYP19A1P11511 503 aaPredicted RBP16.38■□□□□ 0.21
GTF3C1-208ENST00000567843 TEFQ10587 303 aa16.38■□□□□ 0.21
GTF3C1-208ENST00000567843 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
GTF3C1-208ENST00000567843 NUDCQ9Y266 331 aa16.38■□□□□ 0.21
GTF3C1-208ENST00000567843 PARP3Q9Y6F1 533 aa16.38■□□□□ 0.21
GTF3C1-208ENST00000567843 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
GTF3C1-208ENST00000567843 ZBTB1Q9Y2K1 713 aa16.37■□□□□ 0.21
GTF3C1-208ENST00000567843 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
GTF3C1-208ENST00000567843 TJP1Q07157 1748 aa16.36■□□□□ 0.21
GTF3C1-208ENST00000567843 MRC1P22897 1456 aa16.36■□□□□ 0.21
GTF3C1-208ENST00000567843 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
GTF3C1-208ENST00000567843 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
GTF3C1-208ENST00000567843 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
GTF3C1-208ENST00000567843 USP42Q9H9J4 1324 aaKnown RBP16.36■□□□□ 0.21
GTF3C1-208ENST00000567843 ZNF831Q5JPB2 1677 aa16.36■□□□□ 0.21
GTF3C1-208ENST00000567843 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
GTF3C1-208ENST00000567843 KCNQ3O43525 872 aa16.35■□□□□ 0.21
GTF3C1-208ENST00000567843 DPEP1P16444 411 aa16.35■□□□□ 0.21
GTF3C1-208ENST00000567843 DDR1Q08345 913 aa16.35■□□□□ 0.21
GTF3C1-208ENST00000567843 SOS1Q07889 1333 aaPredicted RBP16.35■□□□□ 0.21
GTF3C1-208ENST00000567843 ZPR1O75312 459 aa16.34■□□□□ 0.21
GTF3C1-208ENST00000567843 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
GTF3C1-208ENST00000567843 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
GTF3C1-208ENST00000567843 DCTN1Q14203 1278 aa16.33■□□□□ 0.2
GTF3C1-208ENST00000567843 ZNF790Q6PG37 636 aa16.33■□□□□ 0.2
GTF3C1-208ENST00000567843 MCM10Q7L590 875 aa16.33■□□□□ 0.2
GTF3C1-208ENST00000567843 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
GTF3C1-208ENST00000567843 TGFB2P61812 414 aa16.32■□□□□ 0.2
GTF3C1-208ENST00000567843 C10orf71Q711Q0 1435 aa16.32■□□□□ 0.2
GTF3C1-208ENST00000567843 ZNF526Q8TF50 670 aaPredicted RBP16.32■□□□□ 0.2
GTF3C1-208ENST00000567843 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
GTF3C1-208ENST00000567843 COL15A1P39059 1388 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms