RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 TERTO14746 1132 aaKnown RBP8.48□□□□□ -1.05
CAPN3-217ENST00000567817 GNRH1P01148 92 aa8.48□□□□□ -1.05
CAPN3-217ENST00000567817 GPC1P35052 558 aa8.48□□□□□ -1.05
CAPN3-217ENST00000567817 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-217ENST00000567817 RNF217Q8TC41 542 aa8.48□□□□□ -1.05
CAPN3-217ENST00000567817 A0A1W2PRU2 124 aa8.47□□□□□ -1.05
CAPN3-217ENST00000567817 LZTS3O60299 673 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-217ENST00000567817 RNF144AP50876 292 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-217ENST00000567817 NFX1Q12986 1120 aaKnown RBP8.47□□□□□ -1.05
CAPN3-217ENST00000567817 CLN3Q13286 438 aa8.47□□□□□ -1.05
CAPN3-217ENST00000567817 ARHGEF10LQ9HCE6 1279 aa8.47□□□□□ -1.05
CAPN3-217ENST00000567817 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.06
CAPN3-217ENST00000567817 SKIP12755 728 aa8.46□□□□□ -1.06
CAPN3-217ENST00000567817 FAM69CQ0P6D2 419 aa8.46□□□□□ -1.06
CAPN3-217ENST00000567817 HDGFL1Q5TGJ6 251 aa8.46□□□□□ -1.06
CAPN3-217ENST00000567817 TREML4Q6UXN2 200 aa8.46□□□□□ -1.06
CAPN3-217ENST00000567817 DIP2BQ9P265 1576 aa8.46□□□□□ -1.06
CAPN3-217ENST00000567817 ABCA5Q8WWZ7 1642 aa8.46□□□□□ -1.06
CAPN3-217ENST00000567817 ABCA10Q8WWZ4 1543 aa8.45□□□□□ -1.06
CAPN3-217ENST00000567817 MEN1O00255 615 aa8.45□□□□□ -1.06
CAPN3-217ENST00000567817 WFS1O76024 890 aa8.45□□□□□ -1.06
CAPN3-217ENST00000567817 EML3Q32P44 896 aa8.45□□□□□ -1.06
CAPN3-217ENST00000567817 SLC16A10Q8TF71 515 aa8.45□□□□□ -1.06
CAPN3-217ENST00000567817 GLMNQ92990 594 aa8.45□□□□□ -1.06
CAPN3-217ENST00000567817 NLRP3Q96P20 1036 aa8.45□□□□□ -1.06
CAPN3-217ENST00000567817 GTF3C3Q9Y5Q9 886 aa8.45□□□□□ -1.06
CAPN3-217ENST00000567817 ESCO1Q5FWF5 840 aa8.44□□□□□ -1.06
CAPN3-217ENST00000567817 LYSMD3Q7Z3D4 306 aa8.44□□□□□ -1.06
CAPN3-217ENST00000567817 FBXO41Q8TF61 875 aa8.44□□□□□ -1.06
CAPN3-217ENST00000567817 UCN2Q96RP3 112 aa8.44□□□□□ -1.06
CAPN3-217ENST00000567817 USP17L5A8MUK1 530 aa8.43□□□□□ -1.06
CAPN3-217ENST00000567817 H3BM21 787 aa8.43□□□□□ -1.06
CAPN3-217ENST00000567817 PTSQ03393 145 aa8.43□□□□□ -1.06
CAPN3-217ENST00000567817 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
CAPN3-217ENST00000567817 ESYT1Q9BSJ8 1104 aa8.43□□□□□ -1.06
CAPN3-217ENST00000567817 RAB6BQ9NRW1 208 aa8.43□□□□□ -1.06
CAPN3-217ENST00000567817 CUX1P39880 1505 aa8.43□□□□□ -1.06
CAPN3-217ENST00000567817 HECW2Q9P2P5 1572 aa8.43□□□□□ -1.06
CAPN3-217ENST00000567817 IL2RAP01589 272 aa8.42□□□□□ -1.06
CAPN3-217ENST00000567817 NCOA4Q13772 614 aa8.42□□□□□ -1.06
CAPN3-217ENST00000567817 PLEKHM2Q8IWE5 1019 aa8.42□□□□□ -1.06
CAPN3-217ENST00000567817 CNKSR1Q969H4 720 aa8.42□□□□□ -1.06
CAPN3-217ENST00000567817 ADAMTS12P58397 1594 aa8.42□□□□□ -1.06
CAPN3-217ENST00000567817 ADGRL1O94910 1474 aa8.41□□□□□ -1.06
CAPN3-217ENST00000567817 FHAD1B1AJZ9 1412 aa8.41□□□□□ -1.06
CAPN3-217ENST00000567817 ATP9BO43861 1147 aa8.41□□□□□ -1.06
CAPN3-217ENST00000567817 PPFIA3O75145 1194 aa8.41□□□□□ -1.06
CAPN3-217ENST00000567817 SLC27A3Q5K4L6 730 aa8.41□□□□□ -1.06
CAPN3-217ENST00000567817 XAGE2Q96GT9 111 aa8.41□□□□□ -1.06
CAPN3-217ENST00000567817 NOD1Q9Y239 953 aa8.41□□□□□ -1.06
CAPN3-217ENST00000567817 HRH3Q9Y5N1 445 aa8.41□□□□□ -1.06
CAPN3-217ENST00000567817 SLC35F4A4IF30 521 aa8.4□□□□□ -1.06
CAPN3-217ENST00000567817 WASLO00401 505 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-217ENST00000567817 VEGFBP49765 207 aa8.4□□□□□ -1.06
CAPN3-217ENST00000567817 TBC1D9Q6ZT07 1266 aa8.4□□□□□ -1.06
CAPN3-217ENST00000567817 IRF7Q92985 503 aa8.4□□□□□ -1.06
CAPN3-217ENST00000567817 CALR3Q96L12 384 aaKnown RBP8.4□□□□□ -1.06
CAPN3-217ENST00000567817 GRIP2Q9C0E4 1043 aa8.4□□□□□ -1.06
CAPN3-217ENST00000567817 ETNK1Q9HBU6 452 aa8.4□□□□□ -1.06
CAPN3-217ENST00000567817 PRG4Q92954 1404 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-217ENST00000567817 USP17L3A6NCW0 530 aa8.39□□□□□ -1.07
CAPN3-217ENST00000567817 USP17L4A6NCW7 530 aa8.39□□□□□ -1.07
CAPN3-217ENST00000567817 VSIG8P0DPA2 414 aa8.39□□□□□ -1.07
CAPN3-217ENST00000567817 SCNN1DP51172 638 aa8.39□□□□□ -1.07
CAPN3-217ENST00000567817 GDF10P55107 478 aa8.39□□□□□ -1.07
CAPN3-217ENST00000567817 USP17L2Q6R6M4 530 aa8.39□□□□□ -1.07
CAPN3-217ENST00000567817 USP17L1Q7RTZ2 530 aa8.39□□□□□ -1.07
CAPN3-217ENST00000567817 PRICKLE2Q7Z3G6 844 aa8.39□□□□□ -1.07
CAPN3-217ENST00000567817 SENP3-EIF4A1A0A087X0R7 540 aa8.38□□□□□ -1.07
CAPN3-217ENST00000567817 SPATA31C2B4DYI2 1134 aa8.38□□□□□ -1.07
CAPN3-217ENST00000567817 GTF2IP78347 998 aa8.38□□□□□ -1.07
CAPN3-217ENST00000567817 CENPCQ03188 943 aa8.38□□□□□ -1.07
CAPN3-217ENST00000567817 DEPDC4Q8N2C3 294 aa8.38□□□□□ -1.07
CAPN3-217ENST00000567817 CCDC155Q8N6L0 562 aa8.38□□□□□ -1.07
CAPN3-217ENST00000567817 PCDHGA11Q9Y5H2 935 aa8.38□□□□□ -1.07
CAPN3-217ENST00000567817 INHAP05111 366 aa8.37□□□□□ -1.07
CAPN3-217ENST00000567817 WDR44Q5JSH3 913 aa8.37□□□□□ -1.07
CAPN3-217ENST00000567817 LCE2CQ5TA81 110 aa8.37□□□□□ -1.07
CAPN3-217ENST00000567817 TRIM50Q86XT4 487 aa8.37□□□□□ -1.07
CAPN3-217ENST00000567817 ZSCAN10Q96SZ4 725 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-217ENST00000567817 FHDC1Q9C0D6 1143 aaPredicted RBP8.37□□□□□ -1.07
CAPN3-217ENST00000567817 ZMYND15Q9H091 742 aa8.37□□□□□ -1.07
CAPN3-217ENST00000567817 ERICH3Q5RHP9 1530 aa8.36□□□□□ -1.07
CAPN3-217ENST00000567817 STAU1O95793 577 aaKnown RBP8.36□□□□□ -1.07
CAPN3-217ENST00000567817 RHOQP17081 205 aa8.36□□□□□ -1.07
CAPN3-217ENST00000567817 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
CAPN3-217ENST00000567817 TLR1Q15399 786 aa8.36□□□□□ -1.07
CAPN3-217ENST00000567817 TAS1R3Q7RTX0 852 aa8.36□□□□□ -1.07
CAPN3-217ENST00000567817 ERBB4Q15303 1308 aa8.35□□□□□ -1.07
CAPN3-217ENST00000567817 TMEM229AB2RXF0 380 aa8.35□□□□□ -1.07
CAPN3-217ENST00000567817 WIPF1O43516 503 aa8.35□□□□□ -1.07
CAPN3-217ENST00000567817 ITGA6P23229 1130 aa8.35□□□□□ -1.07
CAPN3-217ENST00000567817 ATP1A2P50993 1020 aa8.35□□□□□ -1.07
CAPN3-217ENST00000567817 POU4F2Q12837 409 aa8.35□□□□□ -1.07
CAPN3-217ENST00000567817 NBPF10Q6P3W6 841 aaKnown RBP8.35□□□□□ -1.07
CAPN3-217ENST00000567817 NBPF15Q8N660 670 aa8.35□□□□□ -1.07
CAPN3-217ENST00000567817 PPP1R12CQ9BZL4 782 aa8.35□□□□□ -1.07
CAPN3-217ENST00000567817 TFIP11Q9UBB9 837 aaKnown RBP8.35□□□□□ -1.07
CAPN3-217ENST00000567817 MAFBQ9Y5Q3 323 aaPredicted RBP8.35□□□□□ -1.07
CAPN3-217ENST00000567817 ADCY10Q96PN6 1610 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms