RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 OVOS2A0A0G2JMS6 1433 aa29.28■■■□□ 2.28
LINC00543-201ENST00000567234 COL16A1Q07092 1604 aaPredicted RBP29.28■■■□□ 2.28
LINC00543-201ENST00000567234 COL18A1P39060 1754 aa29.28■■■□□ 2.28
LINC00543-201ENST00000567234 SLC4A2P04920 1241 aa29.27■■■□□ 2.28
LINC00543-201ENST00000567234 ERBB3P21860 1342 aa29.26■■■□□ 2.28
LINC00543-201ENST00000567234 FAM208AQ9UK61 1670 aaKnown RBP29.26■■■□□ 2.27
LINC00543-201ENST00000567234 KDM3BQ7LBC6 1761 aa29.25■■■□□ 2.27
LINC00543-201ENST00000567234 CCDC30Q5VVM6 783 aa29.24■■■□□ 2.27
LINC00543-201ENST00000567234 CHRNA2Q15822 529 aa29.24■■■□□ 2.27
LINC00543-201ENST00000567234 ZNF530Q6P9A1 599 aaPredicted RBP29.24■■■□□ 2.27
LINC00543-201ENST00000567234 STK31Q9BXU1 1019 aa29.24■■■□□ 2.27
LINC00543-201ENST00000567234 PLEKHG2Q9H7P9 1386 aa29.23■■■□□ 2.27
LINC00543-201ENST00000567234 GCC1Q96CN9 775 aa29.22■■■□□ 2.27
LINC00543-201ENST00000567234 CHMP4AQ9BY43 222 aa29.21■■■□□ 2.27
LINC00543-201ENST00000567234 CPDO75976 1380 aa29.2■■■□□ 2.26
LINC00543-201ENST00000567234 C1orf141Q5JVX7 400 aa29.2■■■□□ 2.26
LINC00543-201ENST00000567234 NPM2Q86SE8 214 aaKnown RBP29.2■■■□□ 2.26
LINC00543-201ENST00000567234 NUCB1Q02818 461 aa29.19■■■□□ 2.26
LINC00543-201ENST00000567234 ADAMTS7Q9UKP4 1686 aa29.18■■■□□ 2.26
LINC00543-201ENST00000567234 HOXB7P09629 217 aa29.18■■■□□ 2.26
LINC00543-201ENST00000567234 IL27Q8NEV9 243 aa29.18■■■□□ 2.26
LINC00543-201ENST00000567234 LGR6Q9HBX8 967 aa29.18■■■□□ 2.26
LINC00543-201ENST00000567234 COL22A1Q8NFW1 1626 aaPredicted RBP29.18■■■□□ 2.26
LINC00543-201ENST00000567234 CCT4P50991 539 aaKnown RBP29.16■■■□□ 2.26
LINC00543-201ENST00000567234 RNMTO43148 476 aaKnown RBP29.15■■■□□ 2.26
LINC00543-201ENST00000567234 TEFQ10587 303 aa29.15■■■□□ 2.26
LINC00543-201ENST00000567234 N4BP2Q86UW6 1770 aaPredicted RBP29.15■■■□□ 2.26
LINC00543-201ENST00000567234 SIPA1L3O60292 1781 aaPredicted RBP29.14■■■□□ 2.26
LINC00543-201ENST00000567234 G2E3Q7L622 706 aa29.14■■■□□ 2.26
LINC00543-201ENST00000567234 SIRT2Q8IXJ6 389 aa29.14■■■□□ 2.26
LINC00543-201ENST00000567234 C1orf115Q9H7X2 142 aa29.14■■■□□ 2.26
LINC00543-201ENST00000567234 EIF4A1P60842 406 aaKnown RBP29.13■■■□□ 2.25
LINC00543-201ENST00000567234 PRDM11Q9NQV5 511 aa29.13■■■□□ 2.25
LINC00543-201ENST00000567234 GSE1Q14687 1217 aa29.13■■■□□ 2.25
LINC00543-201ENST00000567234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.13■■■□□ 2.25
LINC00543-201ENST00000567234 FLIIQ13045 1269 aa29.12■■■□□ 2.25
LINC00543-201ENST00000567234 CHD1LQ86WJ1 897 aa29.12■■■□□ 2.25
LINC00543-201ENST00000567234 RPAP2Q8IXW5 612 aaPredicted RBP29.12■■■□□ 2.25
LINC00543-201ENST00000567234 RAPGEF4Q8WZA2 1011 aa29.11■■■□□ 2.25
LINC00543-201ENST00000567234 MPRIPQ6WCQ1 1025 aa29.1■■■□□ 2.25
LINC00543-201ENST00000567234 BTBD11A6QL63 1104 aa29.1■■■□□ 2.25
LINC00543-201ENST00000567234 ANKRD44Q8N8A2 993 aa29.1■■■□□ 2.25
LINC00543-201ENST00000567234 PXDNLA1KZ92 1463 aa29.1■■■□□ 2.25
LINC00543-201ENST00000567234 ATP10DQ9P241 1426 aa29.09■■■□□ 2.25
LINC00543-201ENST00000567234 NLRP2Q9NX02 1062 aa29.09■■■□□ 2.25
LINC00543-201ENST00000567234 HDGFL1Q5TGJ6 251 aa29.08■■■□□ 2.25
LINC00543-201ENST00000567234 TATP17735 454 aaPredicted RBP29.08■■■□□ 2.25
LINC00543-201ENST00000567234 UBE2Q2Q8WVN8 375 aa29.08■■■□□ 2.25
LINC00543-201ENST00000567234 SCN11AQ9UI33 1791 aa29.08■■■□□ 2.25
LINC00543-201ENST00000567234 SPG7Q9UQ90 795 aa29.06■■■□□ 2.24
LINC00543-201ENST00000567234 FKBP5Q13451 457 aaPredicted RBP29.06■■■□□ 2.24
LINC00543-201ENST00000567234 DCTPP1Q9H773 170 aa29.06■■■□□ 2.24
LINC00543-201ENST00000567234 MEIS3Q99687 375 aa29.04■■■□□ 2.24
LINC00543-201ENST00000567234 LNPKQ9C0E8 428 aa29.04■■■□□ 2.24
LINC00543-201ENST00000567234 PKD1L3Q7Z443 1732 aa29.04■■■□□ 2.24
LINC00543-201ENST00000567234 HEG1Q9ULI3 1381 aa29.04■■■□□ 2.24
LINC00543-201ENST00000567234 F6X3S4 739 aa29.04■■■□□ 2.24
LINC00543-201ENST00000567234 CSB-PGBD3P0DP91 1061 aa29.04■■■□□ 2.24
LINC00543-201ENST00000567234 ANKRD45Q5TZF3 282 aa29.04■■■□□ 2.24
LINC00543-201ENST00000567234 CEP85Q6P2H3 762 aa29.04■■■□□ 2.24
LINC00543-201ENST00000567234 SLC4A10Q6U841 1118 aa29.03■■■□□ 2.24
LINC00543-201ENST00000567234 COL5A2P05997 1499 aaPredicted RBP29.02■■■□□ 2.24
LINC00543-201ENST00000567234 MEGF6O75095 1541 aa29.02■■■□□ 2.24
LINC00543-201ENST00000567234 NECTIN2Q92692 538 aa29.01■■■□□ 2.23
LINC00543-201ENST00000567234 NUTM2BA6NNL0 878 aaPredicted RBP29■■■□□ 2.23
LINC00543-201ENST00000567234 NUTM2EB1AL46 878 aaPredicted RBP29■■■□□ 2.23
LINC00543-201ENST00000567234 NUTM2AQ8IVF1 878 aaPredicted RBP29■■■□□ 2.23
LINC00543-201ENST00000567234 KCNQ3O43525 872 aa28.99■■■□□ 2.23
LINC00543-201ENST00000567234 GNAI3P08754 354 aa28.99■■■□□ 2.23
LINC00543-201ENST00000567234 ADAMTS2O95450 1211 aa28.99■■■□□ 2.23
LINC00543-201ENST00000567234 PHKG2P15735 406 aa28.99■■■□□ 2.23
LINC00543-201ENST00000567234 UPF2Q9HAU5 1272 aaKnown RBP28.99■■■□□ 2.23
LINC00543-201ENST00000567234 COL14A1Q05707 1796 aaKnown RBP28.99■■■□□ 2.23
LINC00543-201ENST00000567234 HMMRO75330 724 aa28.98■■■□□ 2.23
LINC00543-201ENST00000567234 IFNL2Q8IZJ0 200 aa28.98■■■□□ 2.23
LINC00543-201ENST00000567234 SEC24BO95487 1268 aa28.97■■■□□ 2.23
LINC00543-201ENST00000567234 GNAI2P04899 355 aa28.97■■■□□ 2.23
LINC00543-201ENST00000567234 KDM6AO15550 1401 aaPredicted RBP28.96■■■□□ 2.23
LINC00543-201ENST00000567234 EIF2S2P20042 333 aaKnown RBP28.96■■■□□ 2.23
LINC00543-201ENST00000567234 BMP2KLQ5H9B9 411 aa28.96■■■□□ 2.23
LINC00543-201ENST00000567234 STRN4Q9NRL3 753 aa28.96■■■□□ 2.23
LINC00543-201ENST00000567234 GIGYF1O75420 1035 aaPredicted RBP28.95■■■□□ 2.23
LINC00543-201ENST00000567234 HSPA1LP34931 641 aa28.95■■■□□ 2.23
LINC00543-201ENST00000567234 BTG4Q9NY30 223 aa28.95■■■□□ 2.23
LINC00543-201ENST00000567234 PARP4Q9UKK3 1724 aaKnown RBP28.95■■■□□ 2.22
LINC00543-201ENST00000567234 WDR17Q8IZU2 1322 aa28.95■■■□□ 2.22
LINC00543-201ENST00000567234 MRC1P22897 1456 aa28.95■■■□□ 2.22
LINC00543-201ENST00000567234 SLC52A2Q9HAB3 445 aa28.94■■■□□ 2.22
LINC00543-201ENST00000567234 DBF4Q9UBU7 674 aaPredicted RBP28.94■■■□□ 2.22
LINC00543-201ENST00000567234 PLCH1Q4KWH8 1693 aa28.94■■■□□ 2.22
LINC00543-201ENST00000567234 HSP90AB1P08238 724 aaKnown RBP28.94■■■□□ 2.22
LINC00543-201ENST00000567234 NFKBIBQ15653 356 aa28.94■■■□□ 2.22
LINC00543-201ENST00000567234 JCADQ9P266 1359 aa28.93■■■□□ 2.22
LINC00543-201ENST00000567234 PHAXQ9H814 394 aaKnown RBP28.93■■■□□ 2.22
LINC00543-201ENST00000567234 CHPF2Q9P2E5 772 aa28.93■■■□□ 2.22
LINC00543-201ENST00000567234 LARP1Q6PKG0 1096 aaKnown RBP28.92■■■□□ 2.22
LINC00543-201ENST00000567234 DCAF5Q96JK2 942 aa28.92■■■□□ 2.22
LINC00543-201ENST00000567234 DAXXQ9UER7 740 aaPredicted RBP28.92■■■□□ 2.22
LINC00543-201ENST00000567234 TOM1L2Q6ZVM7 507 aa28.91■■■□□ 2.22
LINC00543-201ENST00000567234 EVA1CP58658 441 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms