RNA–Protein interactions for RNA: ENST00000566259.1

CPNE2-207, Transcript of copine 2, humanhuman

TSL 3

Gene CPNE2, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-207ENST00000566259 WWC3Q9ULE0 1092 aa22.03■■□□□ 1.12
CPNE2-207ENST00000566259 C4BP0C0L5 1744 aa22.03■■□□□ 1.12
CPNE2-207ENST00000566259 APLP1P51693 650 aa22.02■■□□□ 1.12
CPNE2-207ENST00000566259 WDR43Q15061 677 aaKnown RBP eCLIP22.02■■□□□ 1.12
CPNE2-207ENST00000566259 NUDCQ9Y266 331 aa22.02■■□□□ 1.12
CPNE2-207ENST00000566259 TOGARAM1Q9Y4F4 1720 aa22.02■■□□□ 1.12
CPNE2-207ENST00000566259 FAM9BQ8IZU0 186 aa22.01■■□□□ 1.11
CPNE2-207ENST00000566259 CICQ96RK0 1608 aaPredicted RBP22■■□□□ 1.11
CPNE2-207ENST00000566259 NBPF6Q5VWK0 638 aa22■■□□□ 1.11
CPNE2-207ENST00000566259 NBPF4Q96M43 638 aa22■■□□□ 1.11
CPNE2-207ENST00000566259 UBR3Q6ZT12 1888 aa21.99■■□□□ 1.11
CPNE2-207ENST00000566259 AMIGO3Q86WK7 504 aa21.99■■□□□ 1.11
CPNE2-207ENST00000566259 RAPGEF4Q8WZA2 1011 aa21.99■■□□□ 1.11
CPNE2-207ENST00000566259 AK7Q96M32 723 aa21.99■■□□□ 1.11
CPNE2-207ENST00000566259 ADAMTS8Q9UP79 889 aa21.99■■□□□ 1.11
CPNE2-207ENST00000566259 USHBP1Q8N6Y0 703 aa21.98■■□□□ 1.11
CPNE2-207ENST00000566259 PCDH11XQ9BZA7 1347 aa21.98■■□□□ 1.11
CPNE2-207ENST00000566259 PCDH11YQ9BZA8 1340 aa21.98■■□□□ 1.11
CPNE2-207ENST00000566259 MPRIPQ6WCQ1 1025 aa21.97■■□□□ 1.11
CPNE2-207ENST00000566259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.96■■□□□ 1.11
CPNE2-207ENST00000566259 U2SURPO15042 1029 aaKnown RBP21.96■■□□□ 1.11
CPNE2-207ENST00000566259 PHF14O94880 888 aa21.96■■□□□ 1.11
CPNE2-207ENST00000566259 U2AF1L5P0DN76 240 aaPredicted RBP21.96■■□□□ 1.11
CPNE2-207ENST00000566259 U2AF1Q01081 240 aaKnown RBP eCLIP21.96■■□□□ 1.11
CPNE2-207ENST00000566259 DNAJC5GQ8N7S2 189 aa21.96■■□□□ 1.11
CPNE2-207ENST00000566259 NCAPD2Q15021 1401 aa21.96■■□□□ 1.11
CPNE2-207ENST00000566259 TATP17735 454 aaPredicted RBP21.95■■□□□ 1.1
CPNE2-207ENST00000566259 TOMM70O94826 608 aa21.94■■□□□ 1.1
CPNE2-207ENST00000566259 SMARCC1Q92922 1105 aaPredicted RBP21.94■■□□□ 1.1
CPNE2-207ENST00000566259 EYA1Q99502 592 aa21.94■■□□□ 1.1
CPNE2-207ENST00000566259 ITGB4P16144 1822 aa21.94■■□□□ 1.1
CPNE2-207ENST00000566259 KDRP35968 1356 aa21.93■■□□□ 1.1
CPNE2-207ENST00000566259 SMIM5Q71RC9 77 aa21.93■■□□□ 1.1
CPNE2-207ENST00000566259 SSFA2P28290 1259 aa21.92■■□□□ 1.1
CPNE2-207ENST00000566259 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
CPNE2-207ENST00000566259 CYP27B1O15528 508 aa21.9■■□□□ 1.1
CPNE2-207ENST00000566259 FCHSD2O94868 740 aa21.9■■□□□ 1.1
CPNE2-207ENST00000566259 PXDNLA1KZ92 1463 aa21.9■■□□□ 1.1
CPNE2-207ENST00000566259 AEBP1Q8IUX7 1158 aa21.89■■□□□ 1.09
CPNE2-207ENST00000566259 KIF13BQ9NQT8 1826 aa21.89■■□□□ 1.09
CPNE2-207ENST00000566259 WDR90Q96KV7 1748 aa21.89■■□□□ 1.09
CPNE2-207ENST00000566259 HMOX1P09601 288 aa21.88■■□□□ 1.09
CPNE2-207ENST00000566259 SULT6B1Q6IMI4 303 aa21.88■■□□□ 1.09
CPNE2-207ENST00000566259 LINC00116Q8NCU8 138 aa21.88■■□□□ 1.09
CPNE2-207ENST00000566259 PLEKHF1Q96S99 279 aa21.88■■□□□ 1.09
CPNE2-207ENST00000566259 KIAA1551Q9HCM1 1747 aa21.88■■□□□ 1.09
CPNE2-207ENST00000566259 PIGBQ92521 554 aa21.87■■□□□ 1.09
CPNE2-207ENST00000566259 PKD1L3Q7Z443 1732 aa21.86■■□□□ 1.09
CPNE2-207ENST00000566259 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
CPNE2-207ENST00000566259 SIK1P57059 783 aa21.86■■□□□ 1.09
CPNE2-207ENST00000566259 CCDC146Q8IYE0 955 aa21.86■■□□□ 1.09
CPNE2-207ENST00000566259 RUNDC1Q96C34 613 aa21.86■■□□□ 1.09
CPNE2-207ENST00000566259 N4BP2Q86UW6 1770 aaPredicted RBP21.85■■□□□ 1.09
CPNE2-207ENST00000566259 PRKAR2BP31323 418 aa21.85■■□□□ 1.09
CPNE2-207ENST00000566259 PNNQ9H307 717 aaKnown RBP21.85■■□□□ 1.09
CPNE2-207ENST00000566259 NMRK2Q9NPI5 230 aa21.85■■□□□ 1.09
CPNE2-207ENST00000566259 GNPATO15228 680 aa21.84■■□□□ 1.09
CPNE2-207ENST00000566259 MMP10P09238 476 aa21.84■■□□□ 1.09
CPNE2-207ENST00000566259 BCS1LQ9Y276 419 aa21.84■■□□□ 1.09
CPNE2-207ENST00000566259 TGFB2P61812 414 aa21.83■■□□□ 1.09
CPNE2-207ENST00000566259 NKX1-1Q15270 411 aaPredicted RBP21.82■■□□□ 1.08
CPNE2-207ENST00000566259 COL13A1Q5TAT6 717 aaPredicted RBP21.82■■□□□ 1.08
CPNE2-207ENST00000566259 RBM46Q8TBY0 533 aaKnown RBP21.82■■□□□ 1.08
CPNE2-207ENST00000566259 ITPK1Q13572 414 aa21.81■■□□□ 1.08
CPNE2-207ENST00000566259 ARHGAP27Q6ZUM4 889 aa21.81■■□□□ 1.08
CPNE2-207ENST00000566259 KLRG1Q96E93 195 aa21.81■■□□□ 1.08
CPNE2-207ENST00000566259 PLEKHG2Q9H7P9 1386 aa21.81■■□□□ 1.08
CPNE2-207ENST00000566259 MAPK8IP3Q9UPT6 1336 aa21.8■■□□□ 1.08
CPNE2-207ENST00000566259 C10orf71Q711Q0 1435 aa21.8■■□□□ 1.08
CPNE2-207ENST00000566259 A0A0G2JLW4 131 aa21.8■■□□□ 1.08
CPNE2-207ENST00000566259 HNRNPUQ00839 825 aaKnown RBP eCLIP21.8■■□□□ 1.08
CPNE2-207ENST00000566259 JMYQ8N9B5 988 aa21.8■■□□□ 1.08
CPNE2-207ENST00000566259 APAF1O14727 1248 aa21.79■■□□□ 1.08
CPNE2-207ENST00000566259 ATP6V1AP38606 617 aa21.79■■□□□ 1.08
CPNE2-207ENST00000566259 YTHDC1Q96MU7 727 aaKnown RBP21.79■■□□□ 1.08
CPNE2-207ENST00000566259 BRCA1P38398 1863 aaKnown RBP21.78■■□□□ 1.08
CPNE2-207ENST00000566259 HTRA3P83110 453 aa21.78■■□□□ 1.08
CPNE2-207ENST00000566259 PHACTR3Q96KR7 559 aa21.78■■□□□ 1.08
CPNE2-207ENST00000566259 TMOD3Q9NYL9 352 aa21.78■■□□□ 1.08
CPNE2-207ENST00000566259 ASAP1Q9ULH1 1129 aa21.78■■□□□ 1.08
CPNE2-207ENST00000566259 C16orf71Q8IYS4 520 aaPredicted RBP21.77■■□□□ 1.08
CPNE2-207ENST00000566259 SPG7Q9UQ90 795 aa21.77■■□□□ 1.08
CPNE2-207ENST00000566259 NEFMP07197 916 aa21.76■■□□□ 1.07
CPNE2-207ENST00000566259 DPEP1P16444 411 aa21.76■■□□□ 1.07
CPNE2-207ENST00000566259 FSTL1Q12841 308 aa21.76■■□□□ 1.07
CPNE2-207ENST00000566259 NCBP3Q53F19 620 aaKnown RBP21.76■■□□□ 1.07
CPNE2-207ENST00000566259 NLGN1Q8N2Q7 840 aa21.76■■□□□ 1.07
CPNE2-207ENST00000566259 CAPN15O75808 1086 aa21.75■■□□□ 1.07
CPNE2-207ENST00000566259 NGEFQ8N5V2 710 aa21.75■■□□□ 1.07
CPNE2-207ENST00000566259 ZBED9Q6R2W3 1325 aa21.75■■□□□ 1.07
CPNE2-207ENST00000566259 C4AP0C0L4 1744 aa21.75■■□□□ 1.07
CPNE2-207ENST00000566259 TMPOP42166 694 aaKnown RBP21.74■■□□□ 1.07
CPNE2-207ENST00000566259 TRAPPC3LQ5T215 181 aa21.74■■□□□ 1.07
CPNE2-207ENST00000566259 C9orf131Q5VYM1 1079 aa21.74■■□□□ 1.07
CPNE2-207ENST00000566259 CCDC87Q9NVE4 849 aa21.74■■□□□ 1.07
CPNE2-207ENST00000566259 RTCBQ9Y3I0 505 aaKnown RBP21.74■■□□□ 1.07
CPNE2-207ENST00000566259 ARFGEF1Q9Y6D6 1849 aa21.73■■□□□ 1.07
CPNE2-207ENST00000566259 NFE2L2Q16236 605 aa21.73■■□□□ 1.07
CPNE2-207ENST00000566259 PCNTO95613 3336 aa21.72■■□□□ 1.07
CPNE2-207ENST00000566259 KCPQ6ZWJ8 1503 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms