RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 CHD4Q14839 1912 aa16.29■□□□□ 0.2
FANCA-218ENST00000565582 GNPATO15228 680 aa16.29■□□□□ 0.2
FANCA-218ENST00000565582 ATP6V1AP38606 617 aa16.29■□□□□ 0.2
FANCA-218ENST00000565582 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
FANCA-218ENST00000565582 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
FANCA-218ENST00000565582 FLAD1Q8NFF5 587 aa16.29■□□□□ 0.2
FANCA-218ENST00000565582 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
FANCA-218ENST00000565582 SLC4A9Q96Q91 983 aa16.28■□□□□ 0.2
FANCA-218ENST00000565582 IL13P35225 146 aa16.27■□□□□ 0.2
FANCA-218ENST00000565582 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
FANCA-218ENST00000565582 DCAF5Q96JK2 942 aa16.27■□□□□ 0.2
FANCA-218ENST00000565582 COL5A3P25940 1745 aaPredicted RBP16.27■□□□□ 0.19
FANCA-218ENST00000565582 SSFA2P28290 1259 aa16.26■□□□□ 0.19
FANCA-218ENST00000565582 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
FANCA-218ENST00000565582 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
FANCA-218ENST00000565582 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
FANCA-218ENST00000565582 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
FANCA-218ENST00000565582 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
FANCA-218ENST00000565582 MTHFSP49914 203 aa16.25■□□□□ 0.19
FANCA-218ENST00000565582 CABP4P57796 275 aa16.25■□□□□ 0.19
FANCA-218ENST00000565582 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
FANCA-218ENST00000565582 WWC3Q9ULE0 1092 aa16.25■□□□□ 0.19
FANCA-218ENST00000565582 ZNF831Q5JPB2 1677 aa16.24■□□□□ 0.19
FANCA-218ENST00000565582 HMGB2P26583 209 aaKnown RBP16.24■□□□□ 0.19
FANCA-218ENST00000565582 HMOX1P09601 288 aa16.23■□□□□ 0.19
FANCA-218ENST00000565582 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
FANCA-218ENST00000565582 TJP1Q07157 1748 aa16.22■□□□□ 0.19
FANCA-218ENST00000565582 PER1O15534 1290 aaPredicted RBP16.22■□□□□ 0.19
FANCA-218ENST00000565582 PTCD1O75127 700 aaKnown RBP16.22■□□□□ 0.19
FANCA-218ENST00000565582 CD2APQ9Y5K6 639 aa16.22■□□□□ 0.19
FANCA-218ENST00000565582 C4AP0C0L4 1744 aa16.22■□□□□ 0.19
FANCA-218ENST00000565582 NFATC2IPQ8NCF5 419 aa16.21■□□□□ 0.19
FANCA-218ENST00000565582 COL3A1P02461 1466 aaPredicted RBP16.21■□□□□ 0.19
FANCA-218ENST00000565582 CICQ96RK0 1608 aaPredicted RBP16.2■□□□□ 0.18
FANCA-218ENST00000565582 RTCBQ9Y3I0 505 aaKnown RBP16.2■□□□□ 0.18
FANCA-218ENST00000565582 CNTNAP4Q9C0A0 1308 aa16.19■□□□□ 0.18
FANCA-218ENST00000565582 MMP10P09238 476 aa16.19■□□□□ 0.18
FANCA-218ENST00000565582 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
FANCA-218ENST00000565582 MRC1P22897 1456 aa16.18■□□□□ 0.18
FANCA-218ENST00000565582 LGR6Q9HBX8 967 aa16.18■□□□□ 0.18
FANCA-218ENST00000565582 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
FANCA-218ENST00000565582 KIAA1551Q9HCM1 1747 aa16.17■□□□□ 0.18
FANCA-218ENST00000565582 GRIN3BO60391 1043 aa16.17■□□□□ 0.18
FANCA-218ENST00000565582 DIAPH1O60610 1272 aaKnown RBP16.17■□□□□ 0.18
FANCA-218ENST00000565582 AKAP4Q5JQC9 854 aa16.17■□□□□ 0.18
FANCA-218ENST00000565582 TRAPPC3LQ5T215 181 aa16.17■□□□□ 0.18
FANCA-218ENST00000565582 ARHGEF1Q92888 912 aaKnown RBP16.17■□□□□ 0.18
FANCA-218ENST00000565582 CRKLP46109 303 aaKnown RBP16.16■□□□□ 0.18
FANCA-218ENST00000565582 MTHFSDQ2M296 383 aaKnown RBP16.16■□□□□ 0.18
FANCA-218ENST00000565582 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
FANCA-218ENST00000565582 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
FANCA-218ENST00000565582 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
FANCA-218ENST00000565582 RPS6KA4O75676 772 aa16.15■□□□□ 0.18
FANCA-218ENST00000565582 SLC52A2Q9HAB3 445 aa16.15■□□□□ 0.18
FANCA-218ENST00000565582 KCPQ6ZWJ8 1503 aa16.14■□□□□ 0.18
FANCA-218ENST00000565582 C10orf71Q711Q0 1435 aa16.14■□□□□ 0.17
FANCA-218ENST00000565582 N4BP2Q86UW6 1770 aaPredicted RBP16.14■□□□□ 0.17
FANCA-218ENST00000565582 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
FANCA-218ENST00000565582 RNMTO43148 476 aaKnown RBP16.14■□□□□ 0.17
FANCA-218ENST00000565582 GYS1P13807 737 aa16.14■□□□□ 0.17
FANCA-218ENST00000565582 ADRA2BP18089 450 aa16.14■□□□□ 0.17
FANCA-218ENST00000565582 RFC4P35249 363 aa16.14■□□□□ 0.17
FANCA-218ENST00000565582 SLC39A6Q13433 755 aa16.14■□□□□ 0.17
FANCA-218ENST00000565582 SRP68Q9UHB9 627 aaKnown RBP16.14■□□□□ 0.17
FANCA-218ENST00000565582 KIF13BQ9NQT8 1826 aa16.14■□□□□ 0.17
FANCA-218ENST00000565582 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
FANCA-218ENST00000565582 ATP10DQ9P241 1426 aa16.13■□□□□ 0.17
FANCA-218ENST00000565582 DNAJC10Q8IXB1 793 aa16.13■□□□□ 0.17
FANCA-218ENST00000565582 INTS5Q6P9B9 1019 aaKnown RBP16.11■□□□□ 0.17
FANCA-218ENST00000565582 NLGN1Q8N2Q7 840 aa16.11■□□□□ 0.17
FANCA-218ENST00000565582 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
FANCA-218ENST00000565582 GIGYF1O75420 1035 aaPredicted RBP16.1■□□□□ 0.17
FANCA-218ENST00000565582 C1QTNF8P60827 252 aa16.1■□□□□ 0.17
FANCA-218ENST00000565582 FKBP8Q14318 412 aa16.1■□□□□ 0.17
FANCA-218ENST00000565582 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
FANCA-218ENST00000565582 ADCY9O60503 1353 aa16.1■□□□□ 0.17
FANCA-218ENST00000565582 A0A0G2JLW4 131 aa16.09■□□□□ 0.17
FANCA-218ENST00000565582 DDR1Q08345 913 aa16.09■□□□□ 0.17
FANCA-218ENST00000565582 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
FANCA-218ENST00000565582 CCDC87Q9NVE4 849 aa16.09■□□□□ 0.17
FANCA-218ENST00000565582 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.16
FANCA-218ENST00000565582 PARP3Q9Y6F1 533 aa16.08■□□□□ 0.16
FANCA-218ENST00000565582 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.16
FANCA-218ENST00000565582 CYP19A1P11511 503 aaPredicted RBP16.07■□□□□ 0.16
FANCA-218ENST00000565582 DPEP1P16444 411 aa16.07■□□□□ 0.16
FANCA-218ENST00000565582 BCS1LQ9Y276 419 aa16.07■□□□□ 0.16
FANCA-218ENST00000565582 ZBTB1Q9Y2K1 713 aa16.07■□□□□ 0.16
FANCA-218ENST00000565582 SIPA1L3O60292 1781 aaPredicted RBP16.06■□□□□ 0.16
FANCA-218ENST00000565582 COL15A1P39059 1388 aa16.06■□□□□ 0.16
FANCA-218ENST00000565582 BRCA1P38398 1863 aaKnown RBP16.05■□□□□ 0.16
FANCA-218ENST00000565582 PRKAR2BP31323 418 aa16.05■□□□□ 0.16
FANCA-218ENST00000565582 USPL1Q5W0Q7 1092 aa16.05■□□□□ 0.16
FANCA-218ENST00000565582 TGFB2P61812 414 aa16.04■□□□□ 0.16
FANCA-218ENST00000565582 IL17REQ8NFR9 667 aa16.04■□□□□ 0.16
FANCA-218ENST00000565582 GAS2L2Q8NHY3 880 aa16.04■□□□□ 0.16
FANCA-218ENST00000565582 PHACTR3Q96KR7 559 aa16.04■□□□□ 0.16
FANCA-218ENST00000565582 GNAT3A8MTJ3 354 aa16.03■□□□□ 0.16
FANCA-218ENST00000565582 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
FANCA-218ENST00000565582 TEFQ10587 303 aa16.03■□□□□ 0.16
FANCA-218ENST00000565582 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms