RNA–Protein interactions for RNA: ENST00000564584.1

CTU2-205, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 3

Gene CTU2, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-205ENST00000564584 LINC00116Q8NCU8 138 aa18.79■□□□□ 0.6
CTU2-205ENST00000564584 SMIM5Q71RC9 77 aa18.78■□□□□ 0.6
CTU2-205ENST00000564584 COL24A1Q17RW2 1714 aa18.77■□□□□ 0.6
CTU2-205ENST00000564584 SSFA2P28290 1259 aa18.77■□□□□ 0.6
CTU2-205ENST00000564584 ATP6V1AP38606 617 aa18.77■□□□□ 0.6
CTU2-205ENST00000564584 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.6
CTU2-205ENST00000564584 ATG3Q9NT62 314 aa18.77■□□□□ 0.6
CTU2-205ENST00000564584 IGSF1Q8N6C5 1336 aa18.76■□□□□ 0.59
CTU2-205ENST00000564584 ITPK1Q13572 414 aa18.76■□□□□ 0.59
CTU2-205ENST00000564584 TUBGCP6Q96RT7 1819 aa18.75■□□□□ 0.59
CTU2-205ENST00000564584 ERVV-2B6SEH9 535 aa18.75■□□□□ 0.59
CTU2-205ENST00000564584 HSP90AB1P08238 724 aaKnown RBP18.75■□□□□ 0.59
CTU2-205ENST00000564584 PLEKHO1Q53GL0 409 aaPredicted RBP18.75■□□□□ 0.59
CTU2-205ENST00000564584 PLEKHG2Q9H7P9 1386 aa18.75■□□□□ 0.59
CTU2-205ENST00000564584 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
CTU2-205ENST00000564584 GNPATO15228 680 aa18.74■□□□□ 0.59
CTU2-205ENST00000564584 PPP2R1AP30153 589 aa18.74■□□□□ 0.59
CTU2-205ENST00000564584 DIEXFQ68CQ4 756 aaKnown RBP18.74■□□□□ 0.59
CTU2-205ENST00000564584 DCAF5Q96JK2 942 aa18.74■□□□□ 0.59
CTU2-205ENST00000564584 CFAP53Q96M91 514 aa18.74■□□□□ 0.59
CTU2-205ENST00000564584 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
CTU2-205ENST00000564584 MTHFSP49914 203 aa18.73■□□□□ 0.59
CTU2-205ENST00000564584 C5P01031 1676 aa18.73■□□□□ 0.59
CTU2-205ENST00000564584 TOGARAM1Q9Y4F4 1720 aa18.72■□□□□ 0.59
CTU2-205ENST00000564584 AMOTQ4VCS5 1084 aa18.72■□□□□ 0.59
CTU2-205ENST00000564584 ZNF530Q6P9A1 599 aaPredicted RBP18.71■□□□□ 0.59
CTU2-205ENST00000564584 RBM42Q9BTD8 480 aaKnown RBP18.71■□□□□ 0.59
CTU2-205ENST00000564584 MAP2P11137 1827 aaKnown RBP18.71■□□□□ 0.59
CTU2-205ENST00000564584 C4BP0C0L5 1744 aa18.71■□□□□ 0.59
CTU2-205ENST00000564584 CABP4P57796 275 aa18.7■□□□□ 0.58
CTU2-205ENST00000564584 TRAPPC3LQ5T215 181 aa18.69■□□□□ 0.58
CTU2-205ENST00000564584 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
CTU2-205ENST00000564584 SLC4A9Q96Q91 983 aa18.69■□□□□ 0.58
CTU2-205ENST00000564584 RTCBQ9Y3I0 505 aaKnown RBP18.69■□□□□ 0.58
CTU2-205ENST00000564584 RC3H1Q5TC82 1133 aaKnown RBP18.68■□□□□ 0.58
CTU2-205ENST00000564584 C1orf141Q5JVX7 400 aa18.67■□□□□ 0.58
CTU2-205ENST00000564584 SULT6B1Q6IMI4 303 aa18.67■□□□□ 0.58
CTU2-205ENST00000564584 ITGB4P16144 1822 aa18.66■□□□□ 0.58
CTU2-205ENST00000564584 MMP10P09238 476 aa18.66■□□□□ 0.58
CTU2-205ENST00000564584 NLGN1Q8N2Q7 840 aa18.66■□□□□ 0.58
CTU2-205ENST00000564584 KDRP35968 1356 aa18.66■□□□□ 0.58
CTU2-205ENST00000564584 DIAPH1O60610 1272 aaKnown RBP18.65■□□□□ 0.58
CTU2-205ENST00000564584 IL13P35225 146 aa18.65■□□□□ 0.58
CTU2-205ENST00000564584 ARHGEF1Q92888 912 aaKnown RBP18.65■□□□□ 0.58
CTU2-205ENST00000564584 WWC3Q9ULE0 1092 aa18.65■□□□□ 0.58
CTU2-205ENST00000564584 NUDCQ9Y266 331 aa18.65■□□□□ 0.58
CTU2-205ENST00000564584 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
CTU2-205ENST00000564584 RPS6KA4O75676 772 aa18.64■□□□□ 0.57
CTU2-205ENST00000564584 ADRA2BP18089 450 aa18.64■□□□□ 0.57
CTU2-205ENST00000564584 NFATC2IPQ8NCF5 419 aa18.64■□□□□ 0.57
CTU2-205ENST00000564584 KDM6AO15550 1401 aaPredicted RBP18.64■□□□□ 0.57
CTU2-205ENST00000564584 PTCD1O75127 700 aaKnown RBP18.63■□□□□ 0.57
CTU2-205ENST00000564584 HSPA6P17066 643 aa18.63■□□□□ 0.57
CTU2-205ENST00000564584 RFC4P35249 363 aa18.63■□□□□ 0.57
CTU2-205ENST00000564584 CNTNAP4Q9C0A0 1308 aa18.63■□□□□ 0.57
CTU2-205ENST00000564584 ATP10DQ9P241 1426 aa18.62■□□□□ 0.57
CTU2-205ENST00000564584 TGFB2P61812 414 aa18.61■□□□□ 0.57
CTU2-205ENST00000564584 GYS1P13807 737 aa18.6■□□□□ 0.57
CTU2-205ENST00000564584 GPBP1L1Q9HC44 474 aaPredicted RBP18.6■□□□□ 0.57
CTU2-205ENST00000564584 UBR3Q6ZT12 1888 aa18.6■□□□□ 0.57
CTU2-205ENST00000564584 AKAP4Q5JQC9 854 aa18.59■□□□□ 0.57
CTU2-205ENST00000564584 COL3A1P02461 1466 aaPredicted RBP18.58■□□□□ 0.57
CTU2-205ENST00000564584 CCDC87Q9NVE4 849 aa18.58■□□□□ 0.56
CTU2-205ENST00000564584 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.56
CTU2-205ENST00000564584 A0A0G2JLW4 131 aa18.57■□□□□ 0.56
CTU2-205ENST00000564584 CCER2I3L3R5 266 aa18.57■□□□□ 0.56
CTU2-205ENST00000564584 CRKLP46109 303 aaKnown RBP18.57■□□□□ 0.56
CTU2-205ENST00000564584 ZNF526Q8TF50 670 aaPredicted RBP18.56■□□□□ 0.56
CTU2-205ENST00000564584 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
CTU2-205ENST00000564584 ADCY9O60503 1353 aa18.55■□□□□ 0.56
CTU2-205ENST00000564584 U2SURPO15042 1029 aaKnown RBP18.55■□□□□ 0.56
CTU2-205ENST00000564584 HMOX1P09601 288 aa18.55■□□□□ 0.56
CTU2-205ENST00000564584 PNNQ9H307 717 aaKnown RBP18.55■□□□□ 0.56
CTU2-205ENST00000564584 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
CTU2-205ENST00000564584 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
CTU2-205ENST00000564584 BCS1LQ9Y276 419 aa18.55■□□□□ 0.56
CTU2-205ENST00000564584 DPEP1P16444 411 aa18.54■□□□□ 0.56
CTU2-205ENST00000564584 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
CTU2-205ENST00000564584 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
CTU2-205ENST00000564584 SRP68Q9UHB9 627 aaKnown RBP18.54■□□□□ 0.56
CTU2-205ENST00000564584 PXDNLA1KZ92 1463 aa18.53■□□□□ 0.56
CTU2-205ENST00000564584 RNMTO43148 476 aaKnown RBP18.53■□□□□ 0.56
CTU2-205ENST00000564584 USP42Q9H9J4 1324 aaKnown RBP18.52■□□□□ 0.56
CTU2-205ENST00000564584 C10orf71Q711Q0 1435 aa18.52■□□□□ 0.56
CTU2-205ENST00000564584 U2AF1L5P0DN76 240 aaPredicted RBP18.52■□□□□ 0.56
CTU2-205ENST00000564584 U2AF1Q01081 240 aaKnown RBP eCLIP18.52■□□□□ 0.56
CTU2-205ENST00000564584 FKBP8Q14318 412 aa18.52■□□□□ 0.56
CTU2-205ENST00000564584 MTHFSDQ2M296 383 aaKnown RBP18.52■□□□□ 0.56
CTU2-205ENST00000564584 DNAJC10Q8IXB1 793 aa18.52■□□□□ 0.56
CTU2-205ENST00000564584 CAPN15O75808 1086 aa18.51■□□□□ 0.55
CTU2-205ENST00000564584 FCHSD2O94868 740 aa18.51■□□□□ 0.55
CTU2-205ENST00000564584 ARHGAP27Q6ZUM4 889 aa18.51■□□□□ 0.55
CTU2-205ENST00000564584 ZNF831Q5JPB2 1677 aa18.5■□□□□ 0.55
CTU2-205ENST00000564584 CICQ96RK0 1608 aaPredicted RBP18.5■□□□□ 0.55
CTU2-205ENST00000564584 NEFMP07197 916 aa18.5■□□□□ 0.55
CTU2-205ENST00000564584 SLC39A6Q13433 755 aa18.5■□□□□ 0.55
CTU2-205ENST00000564584 ZPR1O75312 459 aa18.49■□□□□ 0.55
CTU2-205ENST00000564584 CYP19A1P11511 503 aaPredicted RBP18.49■□□□□ 0.55
CTU2-205ENST00000564584 KCNA3P22001 575 aa18.49■□□□□ 0.55
CTU2-205ENST00000564584 MIER1Q8N108 512 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms