RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 RASSF7Q02833 373 aa11.33□□□□□ -0.6
LINC01243-201ENST00000562065 TSGA10IPQ3SY00 556 aa11.33□□□□□ -0.6
LINC01243-201ENST00000562065 ZSCAN10Q96SZ4 725 aaPredicted RBP11.33□□□□□ -0.6
LINC01243-201ENST00000562065 NUCKS1Q9H1E3 243 aaKnown RBP11.33□□□□□ -0.6
LINC01243-201ENST00000562065 GPAMQ9HCL2 828 aa11.33□□□□□ -0.6
LINC01243-201ENST00000562065 IGF1RP08069 1367 aa11.32□□□□□ -0.6
LINC01243-201ENST00000562065 CELA2BP08218 269 aaPredicted RBP11.32□□□□□ -0.6
LINC01243-201ENST00000562065 TMEM214Q6NUQ4 689 aaKnown RBP11.32□□□□□ -0.6
LINC01243-201ENST00000562065 F11P03951 625 aa11.31□□□□□ -0.6
LINC01243-201ENST00000562065 IRS1P35568 1242 aa11.31□□□□□ -0.6
LINC01243-201ENST00000562065 GSK3AP49840 483 aa11.31□□□□□ -0.6
LINC01243-201ENST00000562065 WDR44Q5JSH3 913 aa11.31□□□□□ -0.6
LINC01243-201ENST00000562065 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
LINC01243-201ENST00000562065 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
LINC01243-201ENST00000562065 STAU1O95793 577 aaKnown RBP11.3□□□□□ -0.6
LINC01243-201ENST00000562065 USP4Q13107 963 aa11.3□□□□□ -0.6
LINC01243-201ENST00000562065 ESCO1Q5FWF5 840 aa11.3□□□□□ -0.6
LINC01243-201ENST00000562065 MX2P20592 715 aa11.28□□□□□ -0.6
LINC01243-201ENST00000562065 SCARF2Q96GP6 870 aaPredicted RBP11.28□□□□□ -0.6
LINC01243-201ENST00000562065 XAGE2Q96GT9 111 aa11.28□□□□□ -0.6
LINC01243-201ENST00000562065 ENAMQ9NRM1 1142 aa11.28□□□□□ -0.6
LINC01243-201ENST00000562065 HMGXB3Q12766 1538 aa11.28□□□□□ -0.6
LINC01243-201ENST00000562065 PHTF2Q8N3S3 785 aa11.27□□□□□ -0.61
LINC01243-201ENST00000562065 A0A1B0GTH6 734 aa11.26□□□□□ -0.61
LINC01243-201ENST00000562065 TLR1Q15399 786 aa11.26□□□□□ -0.61
LINC01243-201ENST00000562065 FHDC1Q9C0D6 1143 aaPredicted RBP11.26□□□□□ -0.61
LINC01243-201ENST00000562065 ETNK1Q9HBU6 452 aa11.26□□□□□ -0.61
LINC01243-201ENST00000562065 NSFL1CQ9UNZ2 370 aaKnown RBP11.26□□□□□ -0.61
LINC01243-201ENST00000562065 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
LINC01243-201ENST00000562065 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
LINC01243-201ENST00000562065 SIRT1Q96EB6 747 aa11.25□□□□□ -0.61
LINC01243-201ENST00000562065 HRH3Q9Y5N1 445 aa11.25□□□□□ -0.61
LINC01243-201ENST00000562065 CSB-PGBD3P0DP91 1061 aa11.24□□□□□ -0.61
LINC01243-201ENST00000562065 SEMA3FQ13275 785 aa11.24□□□□□ -0.61
LINC01243-201ENST00000562065 WASHC4Q2M389 1173 aa11.24□□□□□ -0.61
LINC01243-201ENST00000562065 PGBD3Q8N328 593 aa11.24□□□□□ -0.61
LINC01243-201ENST00000562065 RUBCNLQ9H714 662 aa11.24□□□□□ -0.61
LINC01243-201ENST00000562065 NCAPD3P42695 1498 aa11.24□□□□□ -0.61
LINC01243-201ENST00000562065 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
LINC01243-201ENST00000562065 MCM6Q14566 821 aa11.23□□□□□ -0.61
LINC01243-201ENST00000562065 ACDQ96AP0 544 aa11.23□□□□□ -0.61
LINC01243-201ENST00000562065 BCRP11274 1271 aa11.22□□□□□ -0.61
LINC01243-201ENST00000562065 SMARCA2P51531 1590 aa11.22□□□□□ -0.61
LINC01243-201ENST00000562065 ATAD2BQ9ULI0 1458 aa11.22□□□□□ -0.61
LINC01243-201ENST00000562065 CUX2O14529 1486 aa11.21□□□□□ -0.61
LINC01243-201ENST00000562065 MSX1P28360 303 aa11.21□□□□□ -0.61
LINC01243-201ENST00000562065 KANK3Q6NY19 840 aa11.21□□□□□ -0.61
LINC01243-201ENST00000562065 PLPP7Q8NBV4 271 aa11.21□□□□□ -0.61
LINC01243-201ENST00000562065 RHBDD1Q8TEB9 315 aa11.21□□□□□ -0.61
LINC01243-201ENST00000562065 PHF24Q9UPV7 400 aa11.21□□□□□ -0.61
LINC01243-201ENST00000562065 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
LINC01243-201ENST00000562065 THBS1P07996 1170 aa11.2□□□□□ -0.62
LINC01243-201ENST00000562065 PLA2G4AP47712 749 aa11.2□□□□□ -0.62
LINC01243-201ENST00000562065 GDF10P55107 478 aa11.2□□□□□ -0.62
LINC01243-201ENST00000562065 EFHC2Q5JST6 749 aa11.2□□□□□ -0.62
LINC01243-201ENST00000562065 PODNQ7Z5L7 613 aa11.19□□□□□ -0.62
LINC01243-201ENST00000562065 CNTNAP5Q8WYK1 1306 aa11.18□□□□□ -0.62
LINC01243-201ENST00000562065 MAP2K3P46734 347 aa11.18□□□□□ -0.62
LINC01243-201ENST00000562065 MAP7D1Q3KQU3 841 aa11.18□□□□□ -0.62
LINC01243-201ENST00000562065 GPAT2Q6NUI2 795 aa11.18□□□□□ -0.62
LINC01243-201ENST00000562065 PPARGC1BQ86YN6 1023 aaKnown RBP11.18□□□□□ -0.62
LINC01243-201ENST00000562065 CFHR5Q9BXR6 569 aa11.18□□□□□ -0.62
LINC01243-201ENST00000562065 CHIC2Q9UKJ5 165 aa11.18□□□□□ -0.62
LINC01243-201ENST00000562065 DNMT3AQ9Y6K1 912 aaPredicted RBP11.18□□□□□ -0.62
LINC01243-201ENST00000562065 THOC2Q8NI27 1593 aaKnown RBP11.18□□□□□ -0.62
LINC01243-201ENST00000562065 BAZ1AQ9NRL2 1556 aaPredicted RBP11.17□□□□□ -0.62
LINC01243-201ENST00000562065 SCNN1DP51172 638 aa11.17□□□□□ -0.62
LINC01243-201ENST00000562065 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
LINC01243-201ENST00000562065 OXCT2Q9BYC2 517 aaPredicted RBP11.17□□□□□ -0.62
LINC01243-201ENST00000562065 SERTAD1Q9UHV2 236 aa11.17□□□□□ -0.62
LINC01243-201ENST00000562065 PHF20L1A8MW92 1017 aa11.16□□□□□ -0.62
LINC01243-201ENST00000562065 INHAP05111 366 aa11.16□□□□□ -0.62
LINC01243-201ENST00000562065 SOX11P35716 441 aa11.16□□□□□ -0.62
LINC01243-201ENST00000562065 AIDAQ96BJ3 306 aa11.16□□□□□ -0.62
LINC01243-201ENST00000562065 LBRQ14739 615 aaKnown RBP11.15□□□□□ -0.62
LINC01243-201ENST00000562065 COG6Q9Y2V7 657 aa11.15□□□□□ -0.62
LINC01243-201ENST00000562065 ERCC6Q03468 1493 aa11.14□□□□□ -0.63
LINC01243-201ENST00000562065 PIK3CDO00329 1044 aa11.14□□□□□ -0.63
LINC01243-201ENST00000562065 BEND7Q8N7W2 519 aaPredicted RBP11.14□□□□□ -0.63
LINC01243-201ENST00000562065 ABHD17AQ96GS6 310 aa11.14□□□□□ -0.63
LINC01243-201ENST00000562065 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
LINC01243-201ENST00000562065 NESP48681 1621 aa11.13□□□□□ -0.63
LINC01243-201ENST00000562065 OIP5O43482 229 aa11.13□□□□□ -0.63
LINC01243-201ENST00000562065 BMP4P12644 408 aa11.13□□□□□ -0.63
LINC01243-201ENST00000562065 NIFKQ9BYG3 293 aaKnown RBP11.13□□□□□ -0.63
LINC01243-201ENST00000562065 SKIP12755 728 aa11.12□□□□□ -0.63
LINC01243-201ENST00000562065 SMTNP53814 917 aa11.12□□□□□ -0.63
LINC01243-201ENST00000562065 WWC1Q8IX03 1113 aa11.12□□□□□ -0.63
LINC01243-201ENST00000562065 KLRG1Q96E93 195 aa11.12□□□□□ -0.63
LINC01243-201ENST00000562065 ATXN7L1Q9ULK2 861 aaPredicted RBP11.12□□□□□ -0.63
LINC01243-201ENST00000562065 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
LINC01243-201ENST00000562065 UBAP2LQ14157 1087 aaKnown RBP11.11□□□□□ -0.63
LINC01243-201ENST00000562065 GALNT6Q8NCL4 622 aa11.11□□□□□ -0.63
LINC01243-201ENST00000562065 FGFR3P22607 806 aa11.1□□□□□ -0.63
LINC01243-201ENST00000562065 PSME1Q06323 249 aa11.1□□□□□ -0.63
LINC01243-201ENST00000562065 EML3Q32P44 896 aa11.1□□□□□ -0.63
LINC01243-201ENST00000562065 RRAGCQ9HB90 399 aa11.1□□□□□ -0.63
LINC01243-201ENST00000562065 BNIP3LO60238 219 aa11.09□□□□□ -0.63
LINC01243-201ENST00000562065 SUZ12Q15022 739 aaKnown RBP11.09□□□□□ -0.63
LINC01243-201ENST00000562065 ARSJQ5FYB0 599 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms